BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003246
         (2146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34027.3| unnamed protein product [Vitis vinifera]              803   0.0  
ref|XP_002267374.1| PREDICTED: riboflavin biosynthesis protein r...   803   0.0  
ref|XP_002534102.1| GTP cyclohydrolase II, putative [Ricinus com...   776   0.0  
ref|XP_002298707.1| predicted protein [Populus trichocarpa] gi|2...   774   0.0  
ref|XP_002864894.1| hypothetical protein ARALYDRAFT_496632 [Arab...   759   0.0  

>emb|CBI34027.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  803 bits (2075), Expect(2) = 0.0
 Identities = 400/509 (78%), Positives = 446/509 (87%)
 Frame = -1

Query: 1960 KYYNGLHFVNSSASVGEAFSFPVIKLSRKSCPSLKGDSRVRAAVVSGEGDLLSYPNGNTA 1781
            K +NGLH VN S S        +I+L  KS  ++KGD R RA ++SGEG LLSY NGN  
Sbjct: 309  KLFNGLHGVNPSLSNWYTSDLALIRLGSKSSFTIKGDGRTRATLISGEGGLLSYSNGNNV 368

Query: 1780 SGQSILNLSPGVDLHADAITLGTLSANMTPGADDFSVGKDDYDLDLPTEGFASITEAIED 1601
            +  +  + S G+++  DAI  GTL A+  P  + F +  D++DLD P+EGF+SI EAIED
Sbjct: 369  AAIT-KDQSVGIEIQPDAIAFGTLEADTAPATNGFPIDNDEFDLDRPSEGFSSIPEAIED 427

Query: 1600 IRRGKFVIVVDDEGRENEGDLIMPASLATPEAMAFIVKHGTGIVCVSMKEDDLERLELPL 1421
            IR+GK V+VVDDE RENEGDLIM ASLATPEAMAFIVKHGTGIVCVSMK +DLERLE+PL
Sbjct: 428  IRQGKIVVVVDDEDRENEGDLIMAASLATPEAMAFIVKHGTGIVCVSMKGEDLERLEIPL 487

Query: 1420 MVAQKKNDEKLSTAFTISVDAKHGTTTGVSAHDRATTILALASQDSGPEDFNRPGHIFPL 1241
            MV QK NDEKLSTAFT+SVDAKHGTTTGVSA DRATTILALAS+DS PEDFNRPGHIFPL
Sbjct: 488  MVTQKDNDEKLSTAFTVSVDAKHGTTTGVSARDRATTILALASRDSKPEDFNRPGHIFPL 547

Query: 1240 KYREGGVLKRAGHTEASVDLAVLAGFDPVAVLCEIVDDDGSMARLPKLREFAQKENLKII 1061
            KYREGGVLKRAGHTEASVDLA+LAG DPVAVLCE+VDDDGSMARLPKLR+FA++ENLKII
Sbjct: 548  KYREGGVLKRAGHTEASVDLAMLAGLDPVAVLCEVVDDDGSMARLPKLRQFAERENLKII 607

Query: 1060 SIADLIRYRRRRDKLVERSASARMPTKWGPFKAYSYRSLLDGIEHIAMVKGEIGDGQDIL 881
            SIADLIRYRR+RDKLV+RSA AR+PT WGPF AY YRS+LDGIEHIAMVKGEIGDGQDIL
Sbjct: 608  SIADLIRYRRKRDKLVDRSAGARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDIL 667

Query: 880  VRVHSECLTGDIFGSARCDCGNQLALAMEKIEAAGRGVLVYLRGHEGRGIGLGHKLRAYN 701
            VRVHSECLTGDIFGSARCDCGNQLALAM++IE AG+GVLVYLRGHEGRGIGLGHKL AYN
Sbjct: 668  VRVHSECLTGDIFGSARCDCGNQLALAMQQIEKAGKGVLVYLRGHEGRGIGLGHKLHAYN 727

Query: 700  LQDDGRDTVEANEELGLPVDSREYGIGAQILRDVGVSTIKLLTNNPAKYIGLKGYGLEIA 521
            LQDDGRDTVEANEELGLPVDSREYGIGAQ+LRD+GV T+KL+TNNPAKYIGLKGYGL ++
Sbjct: 728  LQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPAKYIGLKGYGLAVS 787

Query: 520  GRVPLITPITMENKRYLETKRAKMGHVYG 434
            GRVPL+TPIT EN RYLETKR+KMGHVYG
Sbjct: 788  GRVPLLTPITKENGRYLETKRSKMGHVYG 816



 Score = 27.3 bits (59), Expect(2) = 0.0
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 444 MYMVEFN-HLSGLITGNGDPKVNNSSSDATE 355
           +Y +EFN HL+ LI+GNG   +N      ++
Sbjct: 814 VYGLEFNGHLTNLISGNGKQSINTQPDPVSD 844


>ref|XP_002267374.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like
            [Vitis vinifera]
          Length = 559

 Score =  803 bits (2075), Expect(2) = 0.0
 Identities = 400/509 (78%), Positives = 446/509 (87%)
 Frame = -1

Query: 1960 KYYNGLHFVNSSASVGEAFSFPVIKLSRKSCPSLKGDSRVRAAVVSGEGDLLSYPNGNTA 1781
            K +NGLH VN S S        +I+L  KS  ++KGD R RA ++SGEG LLSY NGN  
Sbjct: 23   KLFNGLHGVNPSLSNWYTSDLALIRLGSKSSFTIKGDGRTRATLISGEGGLLSYSNGNNV 82

Query: 1780 SGQSILNLSPGVDLHADAITLGTLSANMTPGADDFSVGKDDYDLDLPTEGFASITEAIED 1601
            +  +  + S G+++  DAI  GTL A+  P  + F +  D++DLD P+EGF+SI EAIED
Sbjct: 83   AAIT-KDQSVGIEIQPDAIAFGTLEADTAPATNGFPIDNDEFDLDRPSEGFSSIPEAIED 141

Query: 1600 IRRGKFVIVVDDEGRENEGDLIMPASLATPEAMAFIVKHGTGIVCVSMKEDDLERLELPL 1421
            IR+GK V+VVDDE RENEGDLIM ASLATPEAMAFIVKHGTGIVCVSMK +DLERLE+PL
Sbjct: 142  IRQGKIVVVVDDEDRENEGDLIMAASLATPEAMAFIVKHGTGIVCVSMKGEDLERLEIPL 201

Query: 1420 MVAQKKNDEKLSTAFTISVDAKHGTTTGVSAHDRATTILALASQDSGPEDFNRPGHIFPL 1241
            MV QK NDEKLSTAFT+SVDAKHGTTTGVSA DRATTILALAS+DS PEDFNRPGHIFPL
Sbjct: 202  MVTQKDNDEKLSTAFTVSVDAKHGTTTGVSARDRATTILALASRDSKPEDFNRPGHIFPL 261

Query: 1240 KYREGGVLKRAGHTEASVDLAVLAGFDPVAVLCEIVDDDGSMARLPKLREFAQKENLKII 1061
            KYREGGVLKRAGHTEASVDLA+LAG DPVAVLCE+VDDDGSMARLPKLR+FA++ENLKII
Sbjct: 262  KYREGGVLKRAGHTEASVDLAMLAGLDPVAVLCEVVDDDGSMARLPKLRQFAERENLKII 321

Query: 1060 SIADLIRYRRRRDKLVERSASARMPTKWGPFKAYSYRSLLDGIEHIAMVKGEIGDGQDIL 881
            SIADLIRYRR+RDKLV+RSA AR+PT WGPF AY YRS+LDGIEHIAMVKGEIGDGQDIL
Sbjct: 322  SIADLIRYRRKRDKLVDRSAGARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDIL 381

Query: 880  VRVHSECLTGDIFGSARCDCGNQLALAMEKIEAAGRGVLVYLRGHEGRGIGLGHKLRAYN 701
            VRVHSECLTGDIFGSARCDCGNQLALAM++IE AG+GVLVYLRGHEGRGIGLGHKL AYN
Sbjct: 382  VRVHSECLTGDIFGSARCDCGNQLALAMQQIEKAGKGVLVYLRGHEGRGIGLGHKLHAYN 441

Query: 700  LQDDGRDTVEANEELGLPVDSREYGIGAQILRDVGVSTIKLLTNNPAKYIGLKGYGLEIA 521
            LQDDGRDTVEANEELGLPVDSREYGIGAQ+LRD+GV T+KL+TNNPAKYIGLKGYGL ++
Sbjct: 442  LQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPAKYIGLKGYGLAVS 501

Query: 520  GRVPLITPITMENKRYLETKRAKMGHVYG 434
            GRVPL+TPIT EN RYLETKR+KMGHVYG
Sbjct: 502  GRVPLLTPITKENGRYLETKRSKMGHVYG 530



 Score = 27.3 bits (59), Expect(2) = 0.0
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 444 MYMVEFN-HLSGLITGNGDPKVNNSSSDATE 355
           +Y +EFN HL+ LI+GNG   +N      ++
Sbjct: 528 VYGLEFNGHLTNLISGNGKQSINTQPDPVSD 558


>ref|XP_002534102.1| GTP cyclohydrolase II, putative [Ricinus communis]
            gi|223525850|gb|EEF28284.1| GTP cyclohydrolase II,
            putative [Ricinus communis]
          Length = 531

 Score =  776 bits (2004), Expect = 0.0
 Identities = 391/487 (80%), Positives = 430/487 (88%), Gaps = 5/487 (1%)
 Frame = -1

Query: 1882 SRKSCPSLKGDSRVRAAVVSGEGDLLSYPNGNTASGQSIL-----NLSPGVDLHADAITL 1718
            +RK C  LKG SRVRA++VSGEGDLLS  N N A GQ  +     N SPG++L  DAI  
Sbjct: 44   TRKLCFGLKGVSRVRASLVSGEGDLLSCHNNNGAPGQDTIVSNKFNPSPGLELQPDAIGF 103

Query: 1717 GTLSANMTPGADDFSVGKDDYDLDLPTEGFASITEAIEDIRRGKFVIVVDDEGRENEGDL 1538
            GTLSA +TP    F    D+YDLD PT+GFASI EAIEDIR+GK VIVVDDE RENEGDL
Sbjct: 104  GTLSAEITPTTSAFFPDDDEYDLDHPTDGFASIPEAIEDIRQGKLVIVVDDEDRENEGDL 163

Query: 1537 IMPASLATPEAMAFIVKHGTGIVCVSMKEDDLERLELPLMVAQKKNDEKLSTAFTISVDA 1358
            IM AS ATPE MAFIVKHGTGIVCVSMK +DLERLELPLMV  K+N+EKL TAFT++VDA
Sbjct: 164  IMAASKATPEVMAFIVKHGTGIVCVSMKGEDLERLELPLMVTHKENEEKLCTAFTVTVDA 223

Query: 1357 KHGTTTGVSAHDRATTILALASQDSGPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLA 1178
            KHGTTTGVSAHDRA T+LALAS+DS P DFNRPGHIFPLKYREGGVLKRAGHTEASVDL+
Sbjct: 224  KHGTTTGVSAHDRAATVLALASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLS 283

Query: 1177 VLAGFDPVAVLCEIVDDDGSMARLPKLREFAQKENLKIISIADLIRYRRRRDKLVERSAS 998
            +LAG +PVAVLCEIVDDDGSMARLP+LR+FAQ ENLKIISIADLIRYRR+RD+LVE +A+
Sbjct: 284  MLAGLEPVAVLCEIVDDDGSMARLPRLRQFAQTENLKIISIADLIRYRRKRDRLVELAAT 343

Query: 997  ARMPTKWGPFKAYSYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCG 818
            A +PT WGPF+AY YRSLLDGIEHIAMVKGEIGDG+DILVRVHSECLTGDIFGSARCDCG
Sbjct: 344  APIPTMWGPFEAYCYRSLLDGIEHIAMVKGEIGDGKDILVRVHSECLTGDIFGSARCDCG 403

Query: 817  NQLALAMEKIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDS 638
            NQLALAM +IEAAGRG+LVYLRGHEGRGIGLGHKLRA NLQDDGRDTVEANEELGLPVDS
Sbjct: 404  NQLALAMTQIEAAGRGILVYLRGHEGRGIGLGHKLRACNLQDDGRDTVEANEELGLPVDS 463

Query: 637  REYGIGAQILRDVGVSTIKLLTNNPAKYIGLKGYGLEIAGRVPLITPITMENKRYLETKR 458
            REYG+GAQILRD+GV T++L+TNNPAKY+GLKGYGL IAGRVPL+TPIT EN RYLETKR
Sbjct: 464  REYGLGAQILRDLGVHTMRLMTNNPAKYVGLKGYGLAIAGRVPLLTPITRENMRYLETKR 523

Query: 457  AKMGHVY 437
             KMGH+Y
Sbjct: 524  EKMGHIY 530


>ref|XP_002298707.1| predicted protein [Populus trichocarpa] gi|222845965|gb|EEE83512.1|
            predicted protein [Populus trichocarpa]
          Length = 552

 Score =  774 bits (1998), Expect = 0.0
 Identities = 387/510 (75%), Positives = 446/510 (87%), Gaps = 1/510 (0%)
 Frame = -1

Query: 1960 KYYNGLHFVNSSASVGEAFSFPVIKLSR-KSCPSLKGDSRVRAAVVSGEGDLLSYPNGNT 1784
            K +NGLH VNS  + G A +  +I+L   KS   +KG  + RA ++SG+G LLSY NGN 
Sbjct: 28   KLFNGLHGVNSFCASGNALNLTLIRLDGCKSSFGIKGAGKTRATLISGDG-LLSYSNGNG 86

Query: 1783 ASGQSILNLSPGVDLHADAITLGTLSANMTPGADDFSVGKDDYDLDLPTEGFASITEAIE 1604
             + +S L          D  ++GTLSA+     +DF VG DD++LD PTEGF+SI +AIE
Sbjct: 87   VAAKSTL---------LDNGSVGTLSADTASITNDFVVGNDDHELDRPTEGFSSIPDAIE 137

Query: 1603 DIRRGKFVIVVDDEGRENEGDLIMPASLATPEAMAFIVKHGTGIVCVSMKEDDLERLELP 1424
            DIR+GK V+VVDDE RENEGDLIM A LATPEAMAFIVKHGTGIVCVSM+ +DL+RL+LP
Sbjct: 138  DIRQGKIVVVVDDEDRENEGDLIMAAELATPEAMAFIVKHGTGIVCVSMQGEDLDRLQLP 197

Query: 1423 LMVAQKKNDEKLSTAFTISVDAKHGTTTGVSAHDRATTILALASQDSGPEDFNRPGHIFP 1244
            LMV Q +NDEKL TAFT++VDAKHGTTTGVSA+DRATT+LALAS+DS P+DFNRPGHIFP
Sbjct: 198  LMVRQNENDEKLRTAFTVTVDAKHGTTTGVSANDRATTMLALASKDSKPDDFNRPGHIFP 257

Query: 1243 LKYREGGVLKRAGHTEASVDLAVLAGFDPVAVLCEIVDDDGSMARLPKLREFAQKENLKI 1064
            L+YREGGVLKRAGHTEASVDL VLAG DPVAVLCE+VDDDGSMARLPKLR+FA++ENLKI
Sbjct: 258  LRYREGGVLKRAGHTEASVDLVVLAGLDPVAVLCEVVDDDGSMARLPKLRQFAERENLKI 317

Query: 1063 ISIADLIRYRRRRDKLVERSASARMPTKWGPFKAYSYRSLLDGIEHIAMVKGEIGDGQDI 884
            ISIADLIRYRR+ DKLV+RS++A++PT WGPF AY YRS+LDGIEHIAMVKG+IGDGQD+
Sbjct: 318  ISIADLIRYRRKTDKLVDRSSAAQIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDV 377

Query: 883  LVRVHSECLTGDIFGSARCDCGNQLALAMEKIEAAGRGVLVYLRGHEGRGIGLGHKLRAY 704
            LVRVHSECLTGDIFGSARCDCG+QLALAM++IEAAGRGVLVYLRGHEGRGIGLGHKLRAY
Sbjct: 378  LVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAY 437

Query: 703  NLQDDGRDTVEANEELGLPVDSREYGIGAQILRDVGVSTIKLLTNNPAKYIGLKGYGLEI 524
            NLQDDGRDTVEANEELGLPVDSREYGIGAQ+LRD+GV T+KL+TNNPAKYIGLKGYGL +
Sbjct: 438  NLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPAKYIGLKGYGLAV 497

Query: 523  AGRVPLITPITMENKRYLETKRAKMGHVYG 434
            +GRVPL+TPIT +NKRYLETKRAKMGH+YG
Sbjct: 498  SGRVPLLTPITKDNKRYLETKRAKMGHIYG 527


>ref|XP_002864894.1| hypothetical protein ARALYDRAFT_496632 [Arabidopsis lyrata subsp.
            lyrata] gi|297310729|gb|EFH41153.1| hypothetical protein
            ARALYDRAFT_496632 [Arabidopsis lyrata subsp. lyrata]
          Length = 541

 Score =  759 bits (1960), Expect = 0.0
 Identities = 380/479 (79%), Positives = 425/479 (88%), Gaps = 2/479 (0%)
 Frame = -1

Query: 1864 SLKGDSRVRAAVVSGEGDLLSYPNGNTA-SGQSILNLSPGVDLHADAITLGTLSANMTPG 1688
            S+K   +V+AAV+S E DLLS+ NGN   S   +++      L AD+++LGTL+A+  P 
Sbjct: 46   SIKTTGKVKAAVISREDDLLSFTNGNAPLSNGFLIDDRTEEPLEADSVSLGTLAADSAPA 105

Query: 1687 -ADDFSVGKDDYDLDLPTEGFASITEAIEDIRRGKFVIVVDDEGRENEGDLIMPASLATP 1511
             A+ F    DD++LDLPT GF+SI +AIEDIR+GK V+VVDDE RENEGDL+M A LATP
Sbjct: 106  PANGFVTEDDDFELDLPTPGFSSIPQAIEDIRQGKLVVVVDDEDRENEGDLVMAAQLATP 165

Query: 1510 EAMAFIVKHGTGIVCVSMKEDDLERLELPLMVAQKKNDEKLSTAFTISVDAKHGTTTGVS 1331
            EAMAFIVKHGTGIVCVSMKEDDLERL LPLMV QK+N+EKLSTAFT++VDAKHGTTTGVS
Sbjct: 166  EAMAFIVKHGTGIVCVSMKEDDLERLHLPLMVNQKENEEKLSTAFTVTVDAKHGTTTGVS 225

Query: 1330 AHDRATTILALASQDSGPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPVA 1151
            A DRATTIL+LAS+DS PEDFNRPGHIFPLKYREGGVLKRAGHTEASVDL VLAG DPV 
Sbjct: 226  ARDRATTILSLASRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLTVLAGLDPVG 285

Query: 1150 VLCEIVDDDGSMARLPKLREFAQKENLKIISIADLIRYRRRRDKLVERSASARMPTKWGP 971
            VLCEIVDDDGSMARLPKLREFA + NLKI+SIADLIRYRR+RDKLVERS++AR+PT WGP
Sbjct: 286  VLCEIVDDDGSMARLPKLREFAAENNLKIVSIADLIRYRRKRDKLVERSSAARIPTMWGP 345

Query: 970  FKAYSYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMEK 791
            F AY YRS+LDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAM++
Sbjct: 346  FTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMQQ 405

Query: 790  IEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQI 611
            IEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD GRDTVEANEELGLPVDSREYGIGAQ+
Sbjct: 406  IEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQV 465

Query: 610  LRDVGVSTIKLLTNNPAKYIGLKGYGLEIAGRVPLITPITMENKRYLETKRAKMGHVYG 434
            +RD+GV T+KL+TNNPAKY+GLKGYGL I GRVPL++ IT ENKRYLETKR KMGH+YG
Sbjct: 466  IRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLITKENKRYLETKRTKMGHMYG 524