BLASTX nr result

ID: Coptis21_contig00003216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003216
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518500.1| hypothetical protein RCOM_0905090 [Ricinus c...   398   e-108
ref|XP_002266891.1| PREDICTED: uncharacterized protein LOC100252...   387   e-105
ref|XP_003542873.1| PREDICTED: uncharacterized protein LOC100802...   373   e-101
ref|XP_002965893.1| hypothetical protein SELMODRAFT_439335 [Sela...   283   3e-74
ref|XP_003546145.1| PREDICTED: zinc finger MYND domain-containin...   189   8e-46

>ref|XP_002518500.1| hypothetical protein RCOM_0905090 [Ricinus communis]
            gi|223542345|gb|EEF43887.1| hypothetical protein
            RCOM_0905090 [Ricinus communis]
          Length = 632

 Score =  398 bits (1022), Expect = e-108
 Identities = 192/253 (75%), Positives = 214/253 (84%)
 Frame = -2

Query: 955  FGLLPSKGGLSDSWGCLDDGEFPPDLPFSKHVRDGVSSPIILSGWSEYYNLRYLPLTSPV 776
            FGLLP KGGL DSWG LDD ++P D PF  H+RDG+SSPI+LSGWSEYYNLR LPL+SPV
Sbjct: 380  FGLLPVKGGLWDSWGGLDDEDYPCDSPFHNHLRDGISSPILLSGWSEYYNLRSLPLSSPV 439

Query: 775  AAILSYPLTVYYVTMALSISSKNLLLSGREVIVHYLGPEGELDWMTAFTEIGHLLNGLGN 596
            A ILS+PLTVYY+   L+ISSKNLLL G+EVI+HYLGPEGELDWM AF EI HLLNG GN
Sbjct: 440  ADILSHPLTVYYILTTLNISSKNLLLKGKEVILHYLGPEGELDWMPAFAEISHLLNGSGN 499

Query: 595  MQIIMVGPEVPTNLXXXXXXXXXXXXVNLIRGIYQEEATYLPSPHVIVALNCGLENYASW 416
            + I+MVGPEVPTNL            VNL+RGIYQEEATYLPSPHVIVALNCGL+N+ SW
Sbjct: 500  IHIVMVGPEVPTNLSGTTSGVSSRVRVNLVRGIYQEEATYLPSPHVIVALNCGLDNHTSW 559

Query: 415  GGALDLINSMNVPAFFTDQSEISCANAKQVLRGAGLHITHPVTPNPFRSPVRNQGPSSNL 236
            GGAL++I S NVPAF T+QSEISCANAKQVLRGAGLHITHPVTPNPFRSP++ Q  SSNL
Sbjct: 560  GGALEVIKSANVPAFITEQSEISCANAKQVLRGAGLHITHPVTPNPFRSPLKIQSTSSNL 619

Query: 235  PSYSNAFLLGVNT 197
            PSYSN F+LGVNT
Sbjct: 620  PSYSNGFVLGVNT 632


>ref|XP_002266891.1| PREDICTED: uncharacterized protein LOC100252085 [Vitis vinifera]
          Length = 633

 Score =  387 bits (995), Expect = e-105
 Identities = 190/254 (74%), Positives = 209/254 (82%), Gaps = 1/254 (0%)
 Frame = -2

Query: 955  FGLLPSKGGLSDSWGCLDDGEFPPDLPFSKH-VRDGVSSPIILSGWSEYYNLRYLPLTSP 779
            FGLLP KGGL DSWG LDD E+P D PF  H +R+G+SSPI+LS WSEYYNLR L L+SP
Sbjct: 380  FGLLPVKGGLWDSWGGLDDEEYPRDSPFHNHFLREGMSSPILLSSWSEYYNLRSLSLSSP 439

Query: 778  VAAILSYPLTVYYVTMALSISSKNLLLSGREVIVHYLGPEGELDWMTAFTEIGHLLNGLG 599
            VA ILS+ LTVYY+   LS SSKNLLL G+EVI+HYLGPEGELDWM AF E+GHLLNGLG
Sbjct: 440  VADILSHALTVYYILTTLSTSSKNLLLKGKEVILHYLGPEGELDWMPAFAEVGHLLNGLG 499

Query: 598  NMQIIMVGPEVPTNLXXXXXXXXXXXXVNLIRGIYQEEATYLPSPHVIVALNCGLENYAS 419
            N+QI+MVGPEVPTNL            VNL+RG YQEEATYLP PHV+VALNCGLE YAS
Sbjct: 500  NIQIVMVGPEVPTNLSGTTSGISSRVRVNLVRGFYQEEATYLPPPHVVVALNCGLECYAS 559

Query: 418  WGGALDLINSMNVPAFFTDQSEISCANAKQVLRGAGLHITHPVTPNPFRSPVRNQGPSSN 239
            W G LDLI SM +PAFFTDQ EISCANAKQVLR AGLHITHPVTPNPFRSPVR  GP++N
Sbjct: 560  WMGTLDLIKSMGIPAFFTDQCEISCANAKQVLRNAGLHITHPVTPNPFRSPVRYHGPANN 619

Query: 238  LPSYSNAFLLGVNT 197
            LPSYSN F+LGVNT
Sbjct: 620  LPSYSNGFVLGVNT 633


>ref|XP_003542873.1| PREDICTED: uncharacterized protein LOC100802088 [Glycine max]
          Length = 631

 Score =  373 bits (957), Expect = e-101
 Identities = 179/253 (70%), Positives = 207/253 (81%)
 Frame = -2

Query: 955  FGLLPSKGGLSDSWGCLDDGEFPPDLPFSKHVRDGVSSPIILSGWSEYYNLRYLPLTSPV 776
            FGLLP KGGL + WG +D+ E+P D PF+ H    +SSP +LSGW EYYNLR LPL+SPV
Sbjct: 382  FGLLPVKGGLQELWGGIDEFEYPHDSPFNNHF---ISSPFLLSGWPEYYNLRSLPLSSPV 438

Query: 775  AAILSYPLTVYYVTMALSISSKNLLLSGREVIVHYLGPEGELDWMTAFTEIGHLLNGLGN 596
            A ILS+PLTVY++   L+ISSKNL+L G+EVIVHYLGPEGELDWM AF E+GHLLNGLGN
Sbjct: 439  ADILSHPLTVYHILTTLNISSKNLILKGKEVIVHYLGPEGELDWMPAFAEVGHLLNGLGN 498

Query: 595  MQIIMVGPEVPTNLXXXXXXXXXXXXVNLIRGIYQEEATYLPSPHVIVALNCGLENYASW 416
            +QI+MVGPEVPTNL            VNL+RG+YQ EA+YLPSPHV++ALN  LE+Y+SW
Sbjct: 499  VQIVMVGPEVPTNLSGTTSGIGSRVRVNLVRGVYQVEASYLPSPHVVIALNSRLESYSSW 558

Query: 415  GGALDLINSMNVPAFFTDQSEISCANAKQVLRGAGLHITHPVTPNPFRSPVRNQGPSSNL 236
            GGALDLI S+ VPAFFTDQSE+SC NAKQVLR AGLHITHPVTPNPFRSPV+N   SSNL
Sbjct: 559  GGALDLIKSIGVPAFFTDQSEVSCVNAKQVLRNAGLHITHPVTPNPFRSPVKNLTASSNL 618

Query: 235  PSYSNAFLLGVNT 197
            PSYSN F+ GVNT
Sbjct: 619  PSYSNGFVFGVNT 631


>ref|XP_002965893.1| hypothetical protein SELMODRAFT_439335 [Selaginella moellendorffii]
            gi|300166707|gb|EFJ33313.1| hypothetical protein
            SELMODRAFT_439335 [Selaginella moellendorffii]
          Length = 626

 Score =  283 bits (725), Expect = 3e-74
 Identities = 138/252 (54%), Positives = 181/252 (71%)
 Frame = -2

Query: 955  FGLLPSKGGLSDSWGCLDDGEFPPDLPFSKHVRDGVSSPIILSGWSEYYNLRYLPLTSPV 776
            FGLLP +GG + +WG L+D + P D P   +   G +  ++LS W++YY+LR LP  SPV
Sbjct: 378  FGLLPPEGGETRAWG-LEDSQHPVDEPVKHY---GSAGMVVLSNWADYYDLRGLPAESPV 433

Query: 775  AAILSYPLTVYYVTMALSISSKNLLLSGREVIVHYLGPEGELDWMTAFTEIGHLLNGLGN 596
            AA+LS+PLTVY++  ALS  +KNLL   +EV++HY+GPE ELDWM AFTEI HLL+G G+
Sbjct: 434  AALLSHPLTVYHIVTALSPFTKNLLAKNKEVVLHYIGPEPELDWMPAFTEISHLLSGAGS 493

Query: 595  MQIIMVGPEVPTNLXXXXXXXXXXXXVNLIRGIYQEEATYLPSPHVIVALNCGLENYASW 416
            + IIMVGPEVP +L            V  ++G YQE A  LP PH++V LN  LE+  +W
Sbjct: 494  LHIIMVGPEVPGSLSGMTEVLEESVKVTYVQGFYQEHADSLPPPHLVVGLNSSLESDGNW 553

Query: 415  GGALDLINSMNVPAFFTDQSEISCANAKQVLRGAGLHITHPVTPNPFRSPVRNQGPSSNL 236
             GAL++I ++ VP FFTD +E  C NAKQVLR AGLHI++P+TPNPFRSPVR+Q PS N+
Sbjct: 554  TGALEVIKALGVPGFFTDYAETCCLNAKQVLRAAGLHISYPLTPNPFRSPVRHQMPSINV 613

Query: 235  PSYSNAFLLGVN 200
            P YSN F+LG+N
Sbjct: 614  PWYSNGFILGIN 625


>ref|XP_003546145.1| PREDICTED: zinc finger MYND domain-containing protein 15-like
           [Glycine max]
          Length = 129

 Score =  189 bits (480), Expect = 8e-46
 Identities = 91/129 (70%), Positives = 103/129 (79%)
 Frame = -2

Query: 583 MVGPEVPTNLXXXXXXXXXXXXVNLIRGIYQEEATYLPSPHVIVALNCGLENYASWGGAL 404
           MVGPEVPTNL            VNL+RG+YQ EA+YLP+PHV++ALN  L  Y+SWGGAL
Sbjct: 1   MVGPEVPTNLSGTTSGIGSRVRVNLVRGVYQVEASYLPTPHVVIALNSRLAIYSSWGGAL 60

Query: 403 DLINSMNVPAFFTDQSEISCANAKQVLRGAGLHITHPVTPNPFRSPVRNQGPSSNLPSYS 224
           D+I S+ VPAFFTDQSE+SC NAKQVLR AGLHITHPVTPNPFRSPV+N   SSNLPSYS
Sbjct: 61  DVIKSIGVPAFFTDQSEVSCVNAKQVLRNAGLHITHPVTPNPFRSPVKNLTASSNLPSYS 120

Query: 223 NAFLLGVNT 197
           N F+ GVNT
Sbjct: 121 NGFVFGVNT 129


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