BLASTX nr result

ID: Coptis21_contig00003215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003215
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031809.1| pathogenesis-related thaumatin-like protein ...    71   1e-10
ref|NP_568046.1| pathogenesis-related thaumatin-like protein [Ar...    69   5e-10
gb|AAM64698.1| putative thaumatin-like protein [Arabidopsis thal...    69   5e-10
ref|XP_003589504.1| Thaumatin-like protein [Medicago truncatula]...    68   7e-10
ref|XP_004159719.1| PREDICTED: thaumatin-like protein 1-like [Cu...    68   9e-10

>ref|NP_001031809.1| pathogenesis-related thaumatin-like protein [Arabidopsis thaliana]
           gi|4467153|emb|CAB37522.1| putative thaumatin-like
           protein [Arabidopsis thaliana]
           gi|7270849|emb|CAB80530.1| putative thaumatin-like
           protein [Arabidopsis thaliana]
           gi|332661560|gb|AEE86960.1| pathogenesis-related
           thaumatin-like protein [Arabidopsis thaliana]
          Length = 323

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = +1

Query: 85  MISGSFSATFTFQNKCPYTVWPGILNNPNVPTFPSTGFELQNGASQSFDV-QGWAG 249
           M+ GS+ +TFTF N+C YTVWPGIL+N   PT  +TGFEL  G S+S     GW+G
Sbjct: 1   MLKGSYGSTFTFANRCGYTVWPGILSNAGSPTLSTTGFELPKGTSRSLQAPTGWSG 56


>ref|NP_568046.1| pathogenesis-related thaumatin-like protein [Arabidopsis thaliana]
           gi|17979355|gb|AAL49903.1| putative thaumatin protein
           [Arabidopsis thaliana] gi|20466021|gb|AAM20232.1|
           putative thaumatin [Arabidopsis thaliana]
           gi|110737096|dbj|BAF00500.1| thaumatin-like protein
           [Arabidopsis thaliana] gi|332661559|gb|AEE86959.1|
           pathogenesis-related thaumatin-like protein [Arabidopsis
           thaliana]
          Length = 345

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +1

Query: 91  SGSFSATFTFQNKCPYTVWPGILNNPNVPTFPSTGFELQNGASQSFDV-QGWAG 249
           +GS+ +TFTF N+C YTVWPGIL+N   PT  +TGFEL  G S+S     GW+G
Sbjct: 25  TGSYGSTFTFANRCGYTVWPGILSNAGSPTLSTTGFELPKGTSRSLQAPTGWSG 78


>gb|AAM64698.1| putative thaumatin-like protein [Arabidopsis thaliana]
          Length = 345

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +1

Query: 91  SGSFSATFTFQNKCPYTVWPGILNNPNVPTFPSTGFELQNGASQSFDV-QGWAG 249
           +GS+ +TFTF N+C YTVWPGIL+N   PT  +TGFEL  G S+S     GW+G
Sbjct: 25  TGSYGSTFTFANRCGYTVWPGILSNAGSPTLSTTGFELPKGTSRSLQAPTGWSG 78


>ref|XP_003589504.1| Thaumatin-like protein [Medicago truncatula]
           gi|355478552|gb|AES59755.1| Thaumatin-like protein
           [Medicago truncatula]
          Length = 323

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = +1

Query: 82  IMISGSFSATFTFQNKCPYTVWPGILNNPNVPTFPSTGFELQNGASQSFDV-QGWAG 249
           + ISG  S TFTF NKC YTVWPGIL+N  VPT P+TGF LQ G + +      W G
Sbjct: 15  LSISGVISTTFTFVNKCDYTVWPGILSNAGVPTLPTTGFVLQTGETTTVAAPASWGG 71


>ref|XP_004159719.1| PREDICTED: thaumatin-like protein 1-like [Cucumis sativus]
          Length = 308

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = +1

Query: 79  FIMISGSFSATFTFQNKCPYTVWPGILNNPNVPTFPSTGFELQNGASQSFDV-QGWAG 249
           F+ + GSF A FTF NKC +TVWPG+L+      F +TGFEL+ G+S+SF    GW+G
Sbjct: 13  FLTLHGSFGAKFTFVNKCDFTVWPGVLSGAGSLKFDTTGFELRKGSSRSFQAPAGWSG 70


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