BLASTX nr result

ID: Coptis21_contig00003214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003214
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis...   306   8e-81
ref|XP_002532881.1| DAG protein, chloroplast precursor, putative...   300   4e-79
ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|2...   293   4e-77
gb|AFK35502.1| unknown [Medicago truncatula]                          291   1e-76
gb|ABK95784.1| unknown [Populus trichocarpa]                          291   1e-76

>ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis vinifera]
           gi|147779193|emb|CAN67991.1| hypothetical protein
           VITISV_023920 [Vitis vinifera]
          Length = 233

 Score =  306 bits (783), Expect = 8e-81
 Identities = 152/192 (79%), Positives = 169/192 (88%), Gaps = 2/192 (1%)
 Frame = -2

Query: 942 SKPLIWNQRKPSLLLSHSLRVLNPSI--TTRFNTQIRNRVHRSGGDSSYSPLNSGSNFSD 769
           S P +   R+PS+  S +LRV++P    ++RF T +R RV+RSG   SYSPLNSGSNFSD
Sbjct: 27  SHPRLLLTRRPSVQFSRALRVVSPGSAGSSRF-TPVRCRVNRSG--DSYSPLNSGSNFSD 83

Query: 768 RPPTEMAPLFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKRKIYNV 589
           RPPTEMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCY++TLA+V+GS EEAK+KIYNV
Sbjct: 84  RPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNV 143

Query: 588 SCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGDIVQRSPERQ 409
           SCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD E KDYGAEL+VNG+IVQRSPERQ
Sbjct: 144 SCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQ 203

Query: 408 RRVEPVPQRAQD 373
           RRVEP PQRAQD
Sbjct: 204 RRVEPAPQRAQD 215


>ref|XP_002532881.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
           gi|223527366|gb|EEF29510.1| DAG protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 248

 Score =  300 bits (768), Expect = 4e-79
 Identities = 149/188 (79%), Positives = 165/188 (87%)
 Frame = -2

Query: 936 PLIWNQRKPSLLLSHSLRVLNPSITTRFNTQIRNRVHRSGGDSSYSPLNSGSNFSDRPPT 757
           P +   R+  L LSH++  + P   TRF T IR RV+R+G +S+YSPLNSGSNFSDRPP 
Sbjct: 48  PSLLFTRRSLLPLSHAVHSIKP---TRF-TSIRCRVNRAG-NSAYSPLNSGSNFSDRPPN 102

Query: 756 EMAPLFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKRKIYNVSCER 577
           EMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCY++TLA+V+GS EEAK+KIYNVSCER
Sbjct: 103 EMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCER 162

Query: 576 YFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGDIVQRSPERQRRVE 397
           YFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD ENKDYGAEL+VNG+IVQRSPERQRRVE
Sbjct: 163 YFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQRRVE 222

Query: 396 PVPQRAQD 373
           P PQRA D
Sbjct: 223 PQPQRAND 230


>ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|222852411|gb|EEE89958.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  293 bits (751), Expect = 4e-77
 Identities = 149/189 (78%), Positives = 163/189 (86%), Gaps = 2/189 (1%)
 Frame = -2

Query: 933 LIWNQRKPSLLLSHSLRVLNPSIT--TRFNTQIRNRVHRSGGDSSYSPLNSGSNFSDRPP 760
           L+  Q  PSL  SH+L+ +N + +   RF T IR RV+R+G +S YSPLNSGSNFSDRPP
Sbjct: 39  LLCGQSLPSL--SHNLQSINKTTSPAARF-TSIRCRVNRAG-NSGYSPLNSGSNFSDRPP 94

Query: 759 TEMAPLFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKRKIYNVSCE 580
            EMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCY+ETLA+V+GS EEAK KIYNVSCE
Sbjct: 95  NEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIETLAKVVGSEEEAKTKIYNVSCE 154

Query: 579 RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGDIVQRSPERQRRV 400
           RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD E KDYGAEL+VNG+IVQR PERQRRV
Sbjct: 155 RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRPPERQRRV 214

Query: 399 EPVPQRAQD 373
           EP PQRA D
Sbjct: 215 EPQPQRAND 223


>gb|AFK35502.1| unknown [Medicago truncatula]
          Length = 217

 Score =  291 bits (746), Expect = 1e-76
 Identities = 147/184 (79%), Positives = 165/184 (89%), Gaps = 4/184 (2%)
 Frame = -2

Query: 912 PSLLLSHSLR---VLNPSITTRFNTQIRNRVHRSGGDSSYSPLNSG-SNFSDRPPTEMAP 745
           P+ LLS S R    + PS + RF T ++ RV+R+G +S+YSPLNSG SNFS+RPPT+MAP
Sbjct: 18  PNRLLSSSTRRPSQVTPSSSFRFTT-VQCRVNRAG-NSTYSPLNSGNSNFSERPPTDMAP 75

Query: 744 LFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKRKIYNVSCERYFGF 565
           LFPGCDYEHWLIVMDKPGGEGA+KQQMIDCYV+TLA+VLGS EEAK+KIYNVSCERYFGF
Sbjct: 76  LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGF 135

Query: 564 GCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGDIVQRSPERQRRVEPVPQ 385
           GCEIDEETSNKLEGLPGVLFVLPDSYVD ENKDYGAEL+VNG+IVQRSPERQ+RVEP PQ
Sbjct: 136 GCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQKRVEPQPQ 195

Query: 384 RAQD 373
           R QD
Sbjct: 196 RHQD 199


>gb|ABK95784.1| unknown [Populus trichocarpa]
          Length = 241

 Score =  291 bits (746), Expect = 1e-76
 Identities = 143/190 (75%), Positives = 160/190 (84%)
 Frame = -2

Query: 942 SKPLIWNQRKPSLLLSHSLRVLNPSITTRFNTQIRNRVHRSGGDSSYSPLNSGSNFSDRP 763
           S P +   R+    LSH+L+ +N +      T IR RV+R+G +S YSPLNSGSNFSDRP
Sbjct: 35  SLPTVLPCRQSLPSLSHALQSINKTTNPTRFTSIRCRVNRAG-NSGYSPLNSGSNFSDRP 93

Query: 762 PTEMAPLFPGCDYEHWLIVMDKPGGEGANKQQMIDCYVETLARVLGSVEEAKRKIYNVSC 583
           P EMAPLFPGCDYEHWLIVMDKPGGEGA KQQMIDCY++TL++V+GS EEAK KIYNVSC
Sbjct: 94  PNEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLSKVVGSEEEAKNKIYNVSC 153

Query: 582 ERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELYVNGDIVQRSPERQRR 403
           ERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVD E KDYGAEL+VNG+IVQR PERQ+R
Sbjct: 154 ERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRPPERQKR 213

Query: 402 VEPVPQRAQD 373
           VEP PQRA D
Sbjct: 214 VEPQPQRAND 223


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