BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003213
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   371   e-100
ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...   370   e-100
ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...   368   1e-99
gb|AER26533.1| eukaryotic translation initiation factor 3G [Cari...   362   1e-97

>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score =  371 bits (953), Expect = e-100
 Identities = 180/269 (66%), Positives = 211/269 (78%)
 Frame = +1

Query: 46  NYFAPPEVITEPDANGVKKIISYKINEEGXXXXXXXXXXXXXXXXXXXXXXXIQRRSWDK 225
           ++  PP  +  PD NG+KK+I YK N++G                       I+RRSW K
Sbjct: 30  DFLLPPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIRKLAKARLSKRAIERRSWAK 89

Query: 226 FGEAANKDEIGSRLTMVSTEEIILERPRAPGSKPDEGKIAGDPLSNLGKGGGAVLMVCRT 405
           FG+A ++D +GSRLTMVSTEEI+LERPRAPGSK +E K+AGD L+ LGKGG AVLMVCRT
Sbjct: 90  FGDAVHED-VGSRLTMVSTEEILLERPRAPGSKAEESKVAGDSLAQLGKGG-AVLMVCRT 147

Query: 406 CGKRGDHWTAQCPFKDLAQPPESFVDKPPASETAAPSSGTSKGAYVPPSQRAGADRSGQD 585
           CGK+GDHWT++CP+KDLA P E F+DKP ASE  A +SG SKG YVPP  RAGA+R+G +
Sbjct: 148 CGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPGMRAGAERTGTE 207

Query: 586 MRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKG 765
           MRRRN+ENSVRVTNLSEDTREPDL +LF TFGPVSRVY+A DQKTGMSRGFGFVNFV+K 
Sbjct: 208 MRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFVNFVNKE 267

Query: 766 DAEKAIAKLNGYGYDNLILRVEWAAPRTN 852
           DAE+AI KLNGYGYDNLILRVEWA PR+N
Sbjct: 268 DAERAINKLNGYGYDNLILRVEWATPRSN 296


>ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  370 bits (951), Expect = e-100
 Identities = 181/270 (67%), Positives = 216/270 (80%), Gaps = 1/270 (0%)
 Frame = +1

Query: 46  NYFAPPEVITEPDANGVKKIISYKINEEGXXXXXXXXXXXXXXXXXXXXXXXIQRRSWDK 225
           ++  PP+ +  PD NG+KK+I YK N++G                       ++RR+W K
Sbjct: 27  DFLLPPKQVIGPDENGIKKVIEYKFNDDGNKVKITTTTRVRKLAKARLSKRALERRNWSK 86

Query: 226 FGEAANKDEIGSRLTMVSTEEIILERPRAPGSKPDEGKIAGDPLSNLGKGGGAVLMVCRT 405
           FG+A ++D +GSRLTMVSTEEI+LERPRA G+K DE KIAGD L+ LGKGG AVLMVCRT
Sbjct: 87  FGDAIHED-VGSRLTMVSTEEILLERPRAHGAKADETKIAGDNLAQLGKGG-AVLMVCRT 144

Query: 406 CGKRGDHWTAQCPFKDLAQPPESFVDKPPASETAAPSSGTSKGAYVPPSQRAGADRS-GQ 582
           CGK+GDHWT++CP+KDLAQPPE+F+DKPPA+ETA  ++G +KGAYVPPS RAGA+R+ G 
Sbjct: 145 CGKKGDHWTSRCPYKDLAQPPETFIDKPPATETAMAATGATKGAYVPPSMRAGAERTVGS 204

Query: 583 DMRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHK 762
           DMRRRN+ENSVRVTNLSEDTREPDL +LF TFG VSRVY+A DQKTG+SRGFGFVNFV K
Sbjct: 205 DMRRRNEENSVRVTNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNFVSK 264

Query: 763 GDAEKAIAKLNGYGYDNLILRVEWAAPRTN 852
            DAE+AI KLNGYGYDNLILRVEWA PRTN
Sbjct: 265 EDAERAINKLNGYGYDNLILRVEWATPRTN 294


>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score =  370 bits (949), Expect = e-100
 Identities = 180/270 (66%), Positives = 216/270 (80%), Gaps = 1/270 (0%)
 Frame = +1

Query: 46  NYFAPPEVITEPDANGVKKIISYKINEEGXXXXXXXXXXXXXXXXXXXXXXXIQRRSWDK 225
           ++  PP+ +  PD NG+KK+I YK N++G                       ++RR+W K
Sbjct: 26  DFLLPPKQVIGPDDNGIKKVIEYKFNDDGNKIKITTTTRVRKLAKARLSKRAVERRNWPK 85

Query: 226 FGEAANKDEIGSRLTMVSTEEIILERPRAPGSKPDEGKIAGDPLSNLGKGGGAVLMVCRT 405
           FG+A ++D +GSRLTMVSTEEI+LERPRAPG+K DE K+AGD L+ LGKGG AVLMVCRT
Sbjct: 86  FGDAVHED-VGSRLTMVSTEEILLERPRAPGTKADEAKMAGDNLAQLGKGG-AVLMVCRT 143

Query: 406 CGKRGDHWTAQCPFKDLAQPPESFVDKPPASETAAPSSGTSKGAYVPPSQRAGADRS-GQ 582
           CGK+GDHWT++CP+KDLAQPPE+F+DKP A+ETA  +SG +KGAYVPPS RAGA+R+ G 
Sbjct: 144 CGKKGDHWTSRCPYKDLAQPPETFIDKPAATETAMAASGATKGAYVPPSMRAGAERTTGS 203

Query: 583 DMRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHK 762
           DMRRRN+ENSVRVTNLSEDTREPDL +LF TFG VSRVY+A DQKTG+SRGFGFVNFV K
Sbjct: 204 DMRRRNEENSVRVTNLSEDTREPDLLELFRTFGHVSRVYVAIDQKTGVSRGFGFVNFVSK 263

Query: 763 GDAEKAIAKLNGYGYDNLILRVEWAAPRTN 852
            DAE+AI KLNGYGYDNLILRVEWA PR+N
Sbjct: 264 EDAERAINKLNGYGYDNLILRVEWATPRSN 293


>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 301

 Score =  368 bits (945), Expect = 1e-99
 Identities = 178/269 (66%), Positives = 210/269 (78%)
 Frame = +1

Query: 46  NYFAPPEVITEPDANGVKKIISYKINEEGXXXXXXXXXXXXXXXXXXXXXXXIQRRSWDK 225
           ++  PP  +  P+ NG+KK+I YK NE+G                       ++RRSW K
Sbjct: 35  DFLLPPRQVIGPEENGIKKVIEYKFNEDGNKVKITTTTRVRKLAKARLSKRAVERRSWAK 94

Query: 226 FGEAANKDEIGSRLTMVSTEEIILERPRAPGSKPDEGKIAGDPLSNLGKGGGAVLMVCRT 405
           FG+A ++D +GSRLTMVSTEEI+LERPRAPG+K +E KIAGD L+ LGKGG AVLMVCRT
Sbjct: 95  FGDAVHED-VGSRLTMVSTEEILLERPRAPGTKAEETKIAGDSLAQLGKGG-AVLMVCRT 152

Query: 406 CGKRGDHWTAQCPFKDLAQPPESFVDKPPASETAAPSSGTSKGAYVPPSQRAGADRSGQD 585
           CGK+GDHWT++CP+KDLA   ++FVDKPPA+ET   ++GT K AYVPP  R GA+R G D
Sbjct: 153 CGKKGDHWTSRCPYKDLAAQTDAFVDKPPAAETTVATTGTGKAAYVPPGMRPGAERVGSD 212

Query: 586 MRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHKG 765
           MRRRN+ENSVRVTNLSEDTREPDL +LF TFGPVSRVY+A DQKTGMSRGFGFVNFV+K 
Sbjct: 213 MRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKE 272

Query: 766 DAEKAIAKLNGYGYDNLILRVEWAAPRTN 852
           DAE+AI KLNGYGYDNLILRVEWA PRTN
Sbjct: 273 DAERAINKLNGYGYDNLILRVEWATPRTN 301


>gb|AER26533.1| eukaryotic translation initiation factor 3G [Carica papaya]
          Length = 297

 Score =  362 bits (928), Expect = 1e-97
 Identities = 175/270 (64%), Positives = 213/270 (78%), Gaps = 1/270 (0%)
 Frame = +1

Query: 46  NYFAPPEVITEPDANGVKKIISYKINEEGXXXXXXXXXXXXXXXXXXXXXXXIQRRSWDK 225
           ++  PP+ +  PD NG+K++I YK NE+G                       ++RR W K
Sbjct: 30  DFLLPPKQVHGPDENGIKRVIEYKFNEDGNRVKITTTTRVRKLAKARVSKRAMERRGWAK 89

Query: 226 FGEAANKDEIGSRLTMVSTEEIILERPRAPGSKPDEGKIAGDPLSNLGKGGGAVLMVCRT 405
           FG+A ++D +GSRLTMVSTEEI+LERPRAPGSKP+E K+AGD L+ LGKGG A+LMVCRT
Sbjct: 90  FGDAVHED-VGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDSLAQLGKGG-AILMVCRT 147

Query: 406 CGKRGDHWTAQCPFKDLAQPPESFVDKPPASETAAPSSGTSKGAYVPPSQRAGADRSG-Q 582
           CGK+GDHWT++CP+KDLA   E+FVDKP ASET+A ++G+ K  YVPPS RAGA+R+G  
Sbjct: 148 CGKKGDHWTSRCPYKDLAPQTEAFVDKPAASETSAAAAGSGKSTYVPPSMRAGAERTGGS 207

Query: 583 DMRRRNDENSVRVTNLSEDTREPDLQDLFSTFGPVSRVYIAYDQKTGMSRGFGFVNFVHK 762
           DMRRRNDENSVRVTNLSEDTREPDL +LF TFGPV+RVY+A DQKTG+SRGFGFVNFV++
Sbjct: 208 DMRRRNDENSVRVTNLSEDTREPDLLELFRTFGPVTRVYVAIDQKTGVSRGFGFVNFVNR 267

Query: 763 GDAEKAIAKLNGYGYDNLILRVEWAAPRTN 852
            DA++AI KLNGYGYDNLILRVEWA PR N
Sbjct: 268 EDAQRAINKLNGYGYDNLILRVEWATPRAN 297