BLASTX nr result

ID: Coptis21_contig00003186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003186
         (1647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285213.1| PREDICTED: alpha-amylase [Vitis vinifera] gi...   632   e-179
emb|CAN77038.1| hypothetical protein VITISV_004485 [Vitis vinifera]   631   e-178
ref|XP_002282184.1| PREDICTED: alpha-amylase [Vitis vinifera] gi...   620   e-175
dbj|BAC02435.1| alpha-amylase [Ipomoea nil]                           611   e-172
ref|XP_002301187.1| predicted protein [Populus trichocarpa] gi|2...   610   e-172

>ref|XP_002285213.1| PREDICTED: alpha-amylase [Vitis vinifera]
            gi|297741278|emb|CBI32409.3| unnamed protein product
            [Vitis vinifera]
          Length = 424

 Score =  632 bits (1631), Expect = e-179
 Identities = 299/407 (73%), Positives = 339/407 (83%)
 Frame = +2

Query: 278  QGFNWESSKKEGGWYNFLKNSITDIASVGVTHVWLPPSSHSRSDAPQGYIPGRLYDLDAS 457
            QGFNWESSKK+GGWYNFL NSI ++++ G+THVWLPP S S   A +GY+PGRLYDL+AS
Sbjct: 28   QGFNWESSKKQGGWYNFLINSIPELSASGITHVWLPPPSQSA--ASEGYLPGRLYDLNAS 85

Query: 458  KYGNQAELKELIKAFHDKGIKCIADIVINHRSADKQDGRGVYCIFEGGTPDDRLDWGPTM 637
             YG Q ELK LIKAF   GI+CIADIVINHR+A+K+D RG++ IFEGGTPDDRLDWGP+ 
Sbjct: 86   HYGTQYELKALIKAFRSNGIQCIADIVINHRTAEKKDSRGIWAIFEGGTPDDRLDWGPSF 145

Query: 638  ICSDDRTTTKCKDDPEFSDGTGNPDTGDPFCGAPDIDHINPRVQKELADWMNWLKTEIGF 817
            ICSDD           FSDGTGNPDTG  F  APDIDH+NPRVQ+EL+DWMNWLK EIGF
Sbjct: 146  ICSDDTL---------FSDGTGNPDTGAGFDPAPDIDHVNPRVQRELSDWMNWLKIEIGF 196

Query: 818  DGWRFDMSPGYSPDFTKVYMEQTKPDFAVMEVWKSLDKEQDGKLKYNQDAHRQEVVRWVQ 997
             GWRFD + GYSPDFTK+YME T P+FAV E+W SL    D K  YNQDAHR+E+V WV+
Sbjct: 197  AGWRFDFARGYSPDFTKLYMENTSPNFAVGEIWNSLSYGNDSKPNYNQDAHRRELVDWVK 256

Query: 998  AAGGKVTAFDFTTKGILQAAVTGELSRLKDSNGKAPGMIGLSPENSVTFIDNHDTGSTQN 1177
            AAGG VTAFDFTTKGILQAAV GEL RLKDSNG  PGMIGL PEN+VTFIDNHDTGSTQ 
Sbjct: 257  AAGGAVTAFDFTTKGILQAAVEGELWRLKDSNGGPPGMIGLMPENAVTFIDNHDTGSTQK 316

Query: 1178 KWPFPPEKVMQGYVYILTHPGIPSIFYDHLFDWGLKEEIGKLTAIRSRNGIQPNSAVRII 1357
             WPFP +KVMQGYVYILTHPGIPSIFYDH FDWGLKEEI KL +IR+RNGI+PNS VRI+
Sbjct: 317  IWPFPSDKVMQGYVYILTHPGIPSIFYDHFFDWGLKEEISKLISIRTRNGIKPNSVVRIL 376

Query: 1358 TADADLYVAAIDEKIIAKIGSRFEVGNVIPPNFRIATSGNDYAVWEK 1498
             +D DLYVAAIDEKIIAKIG R++VGN++P  F++ATSGN+YAVWEK
Sbjct: 377  ASDPDLYVAAIDEKIIAKIGPRYDVGNLVPSTFKLATSGNNYAVWEK 423


>emb|CAN77038.1| hypothetical protein VITISV_004485 [Vitis vinifera]
          Length = 442

 Score =  631 bits (1627), Expect = e-178
 Identities = 299/406 (73%), Positives = 337/406 (83%)
 Frame = +2

Query: 281  GFNWESSKKEGGWYNFLKNSITDIASVGVTHVWLPPSSHSRSDAPQGYIPGRLYDLDASK 460
            GFNWESSKK+GGWYNFL NSI ++++ G+THVWLPP S S   A +GY+PGRLYDL+AS 
Sbjct: 47   GFNWESSKKQGGWYNFLINSIPELSASGITHVWLPPPSQSA--ASEGYLPGRLYDLNASH 104

Query: 461  YGNQAELKELIKAFHDKGIKCIADIVINHRSADKQDGRGVYCIFEGGTPDDRLDWGPTMI 640
            YG Q ELK LIKAF   GI+CIADIVINHR+A+K+D RG++ IFEGGTPDDRLDWGP+ I
Sbjct: 105  YGTQDELKALIKAFRSNGIQCIADIVINHRTAEKKDSRGIWAIFEGGTPDDRLDWGPSFI 164

Query: 641  CSDDRTTTKCKDDPEFSDGTGNPDTGDPFCGAPDIDHINPRVQKELADWMNWLKTEIGFD 820
            CSDD           FSDGTGNPDTG  F  APDIDH+NPRVQ+EL+DWMNWLK EIGF 
Sbjct: 165  CSDDTL---------FSDGTGNPDTGAGFDPAPDIDHVNPRVQRELSDWMNWLKIEIGFA 215

Query: 821  GWRFDMSPGYSPDFTKVYMEQTKPDFAVMEVWKSLDKEQDGKLKYNQDAHRQEVVRWVQA 1000
            GWRFD + GYSPDFTK+YME T P+FAV E+W SL    D K  YNQDAHR+E+V WV+A
Sbjct: 216  GWRFDFARGYSPDFTKLYMENTSPNFAVGEIWNSLSYGNDSKPNYNQDAHRRELVDWVKA 275

Query: 1001 AGGKVTAFDFTTKGILQAAVTGELSRLKDSNGKAPGMIGLSPENSVTFIDNHDTGSTQNK 1180
            AGG VTAFDFTTKGILQAAV GEL RLKDSNG  PGMIGL PEN+VTFIDNHDTGSTQ  
Sbjct: 276  AGGAVTAFDFTTKGILQAAVEGELWRLKDSNGGPPGMIGLMPENAVTFIDNHDTGSTQKI 335

Query: 1181 WPFPPEKVMQGYVYILTHPGIPSIFYDHLFDWGLKEEIGKLTAIRSRNGIQPNSAVRIIT 1360
            WPFP EKVMQGYVYILTHPGIPSIFYDH FDWGLKEEI KL  IR+RNGI+PNS VRI+ 
Sbjct: 336  WPFPSEKVMQGYVYILTHPGIPSIFYDHFFDWGLKEEISKLIIIRTRNGIKPNSGVRILA 395

Query: 1361 ADADLYVAAIDEKIIAKIGSRFEVGNVIPPNFRIATSGNDYAVWEK 1498
            +D DLYVAAIDEKIIAKIG R++VGN++P  F++ATSGN+YAVWEK
Sbjct: 396  SDPDLYVAAIDEKIIAKIGPRYDVGNLVPSTFKLATSGNNYAVWEK 441


>ref|XP_002282184.1| PREDICTED: alpha-amylase [Vitis vinifera]
            gi|297741283|emb|CBI32414.3| unnamed protein product
            [Vitis vinifera]
          Length = 425

 Score =  620 bits (1599), Expect = e-175
 Identities = 294/408 (72%), Positives = 334/408 (81%), Gaps = 1/408 (0%)
 Frame = +2

Query: 278  QGFNWESSKKEGGWYNFLKNSITDIASVGVTHVWLPPSSHSRSDAPQGYIPGRLYDLDAS 457
            QGFNWESSKKEGGWYNFL NSI ++A+ G+THVWLPP S S S  P+GY+PGRLYDL+AS
Sbjct: 28   QGFNWESSKKEGGWYNFLINSIPELAASGITHVWLPPPSQSVS--PEGYMPGRLYDLNAS 85

Query: 458  KYGNQAELKELIKAFHDKGIKCIADIVINHRSADKQDGRGVYCIFEGGTPDDRLDWGPTM 637
            KYG Q ELK LIK FH KG++CIADIVINHR+A+KQD RG++ IFEGGTPDDRLDW P+ 
Sbjct: 86   KYGTQDELKTLIKVFHSKGVQCIADIVINHRTAEKQDARGIWAIFEGGTPDDRLDWTPSF 145

Query: 638  ICSDDRTTTKCKDDPEFSDGTGNPDTGDPFCGAPDIDHINPRVQKELADWMNWLKTEIGF 817
            IC         KDD  +SDGTGNPD+GD +  APDIDHINPRVQ+EL DWMNWLK EIGF
Sbjct: 146  IC---------KDDTPYSDGTGNPDSGDDYSAAPDIDHINPRVQQELIDWMNWLKIEIGF 196

Query: 818  DGWRFDMSPGYSPDFTKVYMEQTKPDFAVMEVWKSLDKEQDGKLKYNQDAHRQEVVRWVQ 997
            DGWRFD + G+SP FTK YM +T+P FAV E+WKSL    DGK  YNQD+HR+E+V WV+
Sbjct: 197  DGWRFDFARGFSPAFTKFYMAKTRPKFAVGEIWKSLSYRSDGKPSYNQDSHRRELVEWVR 256

Query: 998  AAGGKVTAFDFTTKGILQAAVTGELSRLKDSNGKAPGMIGLSPENSVTFIDNHDTGSTQN 1177
             AGG V AFDFTTKGILQAAV GEL R+KD NGK PGMIGL P N+VTFIDNHDTGST  
Sbjct: 257  GAGGAVNAFDFTTKGILQAAVEGELWRMKDLNGKPPGMIGLMPGNAVTFIDNHDTGSTLQ 316

Query: 1178 KWPFPPEKVMQGYVYILTHPGIPSIFYDHLFDWGLKEEIGKLTAIRSRNGIQPNSAVRII 1357
             WPFP +KVMQGY YILTHPGIPSIFYDH F+WGLKEEI KL  IRSRN I+PNSAVRI+
Sbjct: 317  HWPFPSDKVMQGYAYILTHPGIPSIFYDHFFEWGLKEEIMKLIIIRSRNRIKPNSAVRIL 376

Query: 1358 TADADLYVAAIDEKIIAKIGSRFEVGNVIPPNF-RIATSGNDYAVWEK 1498
             +D+DLYVAAID KII KIG RF+VGN++P +F +IATSG DY VWEK
Sbjct: 377  ASDSDLYVAAIDGKIIVKIGPRFDVGNLVPKSFKKIATSGKDYCVWEK 424


>dbj|BAC02435.1| alpha-amylase [Ipomoea nil]
          Length = 424

 Score =  611 bits (1576), Expect = e-172
 Identities = 283/407 (69%), Positives = 329/407 (80%)
 Frame = +2

Query: 278  QGFNWESSKKEGGWYNFLKNSITDIASVGVTHVWLPPSSHSRSDAPQGYIPGRLYDLDAS 457
            QGFNWES+K++GGWYN L NSI D+A+ G+THVWLPP SHS   APQGY+PGRLYDLDAS
Sbjct: 27   QGFNWESNKQQGGWYNSLINSIPDLANAGITHVWLPPPSHSV--APQGYMPGRLYDLDAS 84

Query: 458  KYGNQAELKELIKAFHDKGIKCIADIVINHRSADKQDGRGVYCIFEGGTPDDRLDWGPTM 637
            KYGN+ +L+ L+ A HDKGIK +ADIVINHR AD +D RG+YCIFEGGTPDDRLDWGP +
Sbjct: 85   KYGNKQQLQALVAALHDKGIKAVADIVINHRCADYKDSRGIYCIFEGGTPDDRLDWGPGL 144

Query: 638  ICSDDRTTTKCKDDPEFSDGTGNPDTGDPFCGAPDIDHINPRVQKELADWMNWLKTEIGF 817
            IC         KDD ++SDGTGN DTG  F GAPDIDH+NPRVQKEL++WMNWLK+EIGF
Sbjct: 145  IC---------KDDTQYSDGTGNADTGMDFGGAPDIDHLNPRVQKELSEWMNWLKSEIGF 195

Query: 818  DGWRFDMSPGYSPDFTKVYMEQTKPDFAVMEVWKSLDKEQDGKLKYNQDAHRQEVVRWVQ 997
            DGWRFD   GY+   TK+YME T P+FAV E W S+    DGK  YNQD HR E+ +WVQ
Sbjct: 196  DGWRFDFVRGYAASLTKIYMENTSPEFAVGEFWDSMAYGSDGKPDYNQDNHRNELSQWVQ 255

Query: 998  AAGGKVTAFDFTTKGILQAAVTGELSRLKDSNGKAPGMIGLSPENSVTFIDNHDTGSTQN 1177
              GG VTAFDFTTKGILQAAV  EL RLKD NGK PG+IG+SP+N+VTFIDNHDTGSTQ+
Sbjct: 256  NGGGAVTAFDFTTKGILQAAVLDELWRLKDPNGKPPGLIGISPKNAVTFIDNHDTGSTQS 315

Query: 1178 KWPFPPEKVMQGYVYILTHPGIPSIFYDHLFDWGLKEEIGKLTAIRSRNGIQPNSAVRII 1357
             WPF  +KV+QGY YILTHPG+P +FYDH FDWGLK+EI KLT+IRSRNGI   S V I+
Sbjct: 316  MWPFSKDKVIQGYAYILTHPGVPCVFYDHFFDWGLKDEISKLTSIRSRNGISETSNVEIL 375

Query: 1358 TADADLYVAAIDEKIIAKIGSRFEVGNVIPPNFRIATSGNDYAVWEK 1498
             ADAD YVA ID+K+I KIGS+++VGN+IPPNF + TSG DYAVWEK
Sbjct: 376  AADADAYVAKIDDKVIMKIGSKYDVGNLIPPNFNLVTSGQDYAVWEK 422


>ref|XP_002301187.1| predicted protein [Populus trichocarpa] gi|222842913|gb|EEE80460.1|
            predicted protein [Populus trichocarpa]
          Length = 404

 Score =  610 bits (1572), Expect = e-172
 Identities = 287/407 (70%), Positives = 325/407 (79%)
 Frame = +2

Query: 278  QGFNWESSKKEGGWYNFLKNSITDIASVGVTHVWLPPSSHSRSDAPQGYIPGRLYDLDAS 457
            QGFNWES  + GGWYN LKN + D+A+ G+THVWLPP+S  +S APQGY+PGRLYDL AS
Sbjct: 8    QGFNWESCNQAGGWYNSLKNLVPDLANAGITHVWLPPAS--QSVAPQGYMPGRLYDLSAS 65

Query: 458  KYGNQAELKELIKAFHDKGIKCIADIVINHRSADKQDGRGVYCIFEGGTPDDRLDWGPTM 637
            KYG+Q ELK LI AFH KGIKC+ADIVINHR+A+KQDGRG++CIFEGGT DDRLDWGP++
Sbjct: 66   KYGSQGELKSLIGAFHQKGIKCLADIVINHRTAEKQDGRGIWCIFEGGTSDDRLDWGPSL 125

Query: 638  ICSDDRTTTKCKDDPEFSDGTGNPDTGDPFCGAPDIDHINPRVQKELADWMNWLKTEIGF 817
            ICSDD           +SDG GNPDTG  F GAPDIDH+NPRVQKEL+DWMNWLK+EIGF
Sbjct: 126  ICSDDTA---------YSDGKGNPDTGGDFGGAPDIDHLNPRVQKELSDWMNWLKSEIGF 176

Query: 818  DGWRFDMSPGYSPDFTKVYMEQTKPDFAVMEVWKSLDKEQDGKLKYNQDAHRQEVVRWVQ 997
            DGWRFD   GY+P  TK+YME T PDFAV E W SL   QDGK  YNQDAHR  +  W+Q
Sbjct: 177  DGWRFDFVKGYAPSITKIYMENTSPDFAVGEKWDSLAYGQDGKPDYNQDAHRGGLKDWIQ 236

Query: 998  AAGGKVTAFDFTTKGILQAAVTGELSRLKDSNGKAPGMIGLSPENSVTFIDNHDTGSTQN 1177
            AAGG VTAFDFTTKGILQ AV GEL RLKDSNGK PG+IGL P+N+VTFIDNHDTGSTQ 
Sbjct: 237  AAGGAVTAFDFTTKGILQDAVQGELWRLKDSNGKPPGLIGLLPQNAVTFIDNHDTGSTQK 296

Query: 1178 KWPFPPEKVMQGYVYILTHPGIPSIFYDHLFDWGLKEEIGKLTAIRSRNGIQPNSAVRII 1357
             WPFP +KVMQGY YILTHPG PSIFYDH FDWGLKEEIGKL  IR  +GI   S V I+
Sbjct: 297  LWPFPSDKVMQGYAYILTHPGTPSIFYDHFFDWGLKEEIGKLATIRKTSGIGSASTVNIL 356

Query: 1358 TADADLYVAAIDEKIIAKIGSRFEVGNVIPPNFRIATSGNDYAVWEK 1498
             +DADLYVAAID  +I KIG + ++GN+IP NF++A SG DY VW K
Sbjct: 357  ASDADLYVAAIDGNMIMKIGPKMDLGNLIPSNFQVAASGTDYCVWVK 403


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