BLASTX nr result

ID: Coptis21_contig00003169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003169
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36672.1| unknown [Lotus japonicus] gi|388497476|gb|AFK3680...   213   8e-53
ref|NP_001236653.1| uncharacterized protein LOC100306554 [Glycin...   211   2e-52
gb|AFK44580.1| unknown [Lotus japonicus]                              210   4e-52
ref|XP_002510603.1| Plastocyanin A, chloroplast precursor, putat...   207   4e-51
ref|NP_001238695.1| uncharacterized protein LOC100499708 [Glycin...   206   5e-51

>gb|AFK36672.1| unknown [Lotus japonicus] gi|388497476|gb|AFK36804.1| unknown
           [Lotus japonicus]
          Length = 167

 Score =  213 bits (541), Expect = 8e-53
 Identities = 111/167 (66%), Positives = 122/167 (73%), Gaps = 1/167 (0%)
 Frame = +2

Query: 98  MATVTSASVAIPSFTGLK-AGAXXXXXXXXXXXXXXXPMVGVKASLKELGXXXXXXXXXX 274
           MATVTS +VAIPSFTGLK AG+               P + VKASLK+ G          
Sbjct: 1   MATVTSTAVAIPSFTGLKSAGSKVSASAKVSSSPSQMPRLSVKASLKDFGVAVVATAASA 60

Query: 275 XXXXXXMAVEVLLGGDDGSLAFVPSAISVAPGEKITFKNNAGFPHNVVFLEDEVPEGVDV 454
                 MA+E+LLG DDG LAFVP++ SVAPGEKITFKNNAGFPHNVVF EDEVP GVD 
Sbjct: 61  VLASNAMAIEILLGSDDGGLAFVPNSFSVAPGEKITFKNNAGFPHNVVFDEDEVPGGVDA 120

Query: 455 SKISMPEEDLLNAPGETYTVSLDAKGTYSFYCSPHQGAGMVGKVTVN 595
           SKISM +EDLLNAPGETY+V+LDAKGTY FYCSPHQGAGMVG VTVN
Sbjct: 121 SKISMSDEDLLNAPGETYSVTLDAKGTYKFYCSPHQGAGMVGSVTVN 167


>ref|NP_001236653.1| uncharacterized protein LOC100306554 [Glycine max]
           gi|255628865|gb|ACU14777.1| unknown [Glycine max]
          Length = 165

 Score =  211 bits (538), Expect = 2e-52
 Identities = 111/166 (66%), Positives = 123/166 (74%)
 Frame = +2

Query: 98  MATVTSASVAIPSFTGLKAGAXXXXXXXXXXXXXXXPMVGVKASLKELGXXXXXXXXXXX 277
           MATVTSA+VAIPSFTGLKA A                + G+KASLK++G           
Sbjct: 1   MATVTSAAVAIPSFTGLKASAGIVSAAVKVSAPQATRL-GIKASLKDVGVAVVATAASAV 59

Query: 278 XXXXXMAVEVLLGGDDGSLAFVPSAISVAPGEKITFKNNAGFPHNVVFLEDEVPEGVDVS 457
                MA+EVLLGGDDGSLAFVP+  SVA GEKI FKNNAGFPHNVVF EDE+P GVD  
Sbjct: 60  LASNAMAIEVLLGGDDGSLAFVPNNFSVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDAG 119

Query: 458 KISMPEEDLLNAPGETYTVSLDAKGTYSFYCSPHQGAGMVGKVTVN 595
           KISM +EDLLNAPGETY+V+LDAKGTYSF+CSPHQGAGMVGKVTVN
Sbjct: 120 KISMSDEDLLNAPGETYSVTLDAKGTYSFFCSPHQGAGMVGKVTVN 165


>gb|AFK44580.1| unknown [Lotus japonicus]
          Length = 167

 Score =  210 bits (535), Expect = 4e-52
 Identities = 110/167 (65%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
 Frame = +2

Query: 98  MATVTSASVAIPSFTGLK-AGAXXXXXXXXXXXXXXXPMVGVKASLKELGXXXXXXXXXX 274
           MATVTS +VAIPSFTGLK AG+               P + VKASLK+ G          
Sbjct: 1   MATVTSTAVAIPSFTGLKSAGSKVSASAKVSSSPSQMPRLSVKASLKDFGVAVVATAASA 60

Query: 275 XXXXXXMAVEVLLGGDDGSLAFVPSAISVAPGEKITFKNNAGFPHNVVFLEDEVPEGVDV 454
                 MA+E+LLG DDG LAFVP++ SVAPGEKITFKNNAGFPHNVVF EDEVP GVD 
Sbjct: 61  VLASNAMAIEILLGSDDGGLAFVPNSFSVAPGEKITFKNNAGFPHNVVFDEDEVPGGVDA 120

Query: 455 SKISMPEEDLLNAPGETYTVSLDAKGTYSFYCSPHQGAGMVGKVTVN 595
           SKISM +EDLLNAPGETY+V+LDAKGTY FYCSPHQGAG VG VTVN
Sbjct: 121 SKISMSDEDLLNAPGETYSVTLDAKGTYKFYCSPHQGAGTVGSVTVN 167


>ref|XP_002510603.1| Plastocyanin A, chloroplast precursor, putative [Ricinus communis]
           gi|223551304|gb|EEF52790.1| Plastocyanin A, chloroplast
           precursor, putative [Ricinus communis]
          Length = 168

 Score =  207 bits (526), Expect = 4e-51
 Identities = 107/168 (63%), Positives = 119/168 (70%), Gaps = 2/168 (1%)
 Frame = +2

Query: 98  MATVTSASVAIPSFTGLKAG--AXXXXXXXXXXXXXXXPMVGVKASLKELGXXXXXXXXX 271
           MATVTSA+VAIPSFTGLKA   A               P + +KAS+KE+G         
Sbjct: 1   MATVTSAAVAIPSFTGLKAASAASTKVNASAKVAAPSLPRMSIKASMKEVGVAVMATAAS 60

Query: 272 XXXXXXXMAVEVLLGGDDGSLAFVPSAISVAPGEKITFKNNAGFPHNVVFLEDEVPEGVD 451
                  MA+E+LLG DDG LAFVP++ SVAPGEKI FKNNAGFPHN+VF EDEVP GVD
Sbjct: 61  AMLASNAMAIEILLGSDDGGLAFVPNSFSVAPGEKIVFKNNAGFPHNIVFDEDEVPSGVD 120

Query: 452 VSKISMPEEDLLNAPGETYTVSLDAKGTYSFYCSPHQGAGMVGKVTVN 595
             KISM EEDLLN PGETY V+L  KGTYSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AGKISMSEEDLLNGPGETYAVTLTEKGTYSFYCAPHQGAGMVGKVTVN 168


>ref|NP_001238695.1| uncharacterized protein LOC100499708 [Glycine max]
           gi|255625977|gb|ACU13333.1| unknown [Glycine max]
          Length = 167

 Score =  206 bits (525), Expect = 5e-51
 Identities = 109/167 (65%), Positives = 120/167 (71%), Gaps = 1/167 (0%)
 Frame = +2

Query: 98  MATVTSASVAIPSFTGLKAGAXXXXXXXXXXXXXXXP-MVGVKASLKELGXXXXXXXXXX 274
           MATVTSA+V+IPSFTGLKA A                   G+KASLK++G          
Sbjct: 1   MATVTSAAVSIPSFTGLKASAGKVSAAAVKVSAPQATRFCGIKASLKDVGVAVVATAASA 60

Query: 275 XXXXXXMAVEVLLGGDDGSLAFVPSAISVAPGEKITFKNNAGFPHNVVFLEDEVPEGVDV 454
                 MA+EVLLG DDGSL F P++ SVAPGEKI FKNNAGFPHNVVF EDE+P GVD 
Sbjct: 61  VLASNAMAIEVLLGTDDGSLVFSPNSFSVAPGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 455 SKISMPEEDLLNAPGETYTVSLDAKGTYSFYCSPHQGAGMVGKVTVN 595
            KISM EEDLLNA GETY+V+LDAKGTYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMSEEDLLNAAGETYSVTLDAKGTYSFYCSPHQGAGMVGKVTVN 167


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