BLASTX nr result

ID: Coptis21_contig00003166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003166
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    58   9e-07

>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
 Frame = +1

Query: 139 SFYSVLERKI--YRVEIPHGHRICGTSFGWLIIIGENSDMKLFHPFTGKVLDLPPLQVSN 312
           SFYS+  +K+  + + +P G R CG+S GWLI   E + + L HPF+ +V+ LPPL    
Sbjct: 204 SFYSITHQKLSKFHLPVPPGTRYCGSSHGWLITTDETNAVSLLHPFSRQVIRLPPLTRLK 263

Query: 313 NSLR----YKYSLETGIL 354
              R    ++Y L  G+L
Sbjct: 264 IPQRTVYGFEYHLHKGVL 281


Top