BLASTX nr result
ID: Coptis21_contig00003165
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003165 (821 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricin... 134 2e-29 ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-... 116 5e-29 ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|... 116 5e-29 gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indi... 115 1e-28 ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Viti... 130 4e-28 >ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricinus communis] gi|223550565|gb|EEF52052.1| Pollen-specific protein SF3, putative [Ricinus communis] Length = 190 Score = 134 bits (338), Expect = 2e-29 Identities = 61/77 (79%), Positives = 70/77 (90%) Frame = +1 Query: 319 RLSNYSSFEGVLYCKPHFDQLFKRTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGG 498 +LSNYSSFEGVLYCKPHFDQLFK TGSLDKSFE P+ V+VD+S D+ ++NS+VS+MF G Sbjct: 46 KLSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGTPKTVRVDRSADQFNSNSRVSSMFAG 105 Query: 499 TQDKCVACKKTVYPIEK 549 TQDKCVACKKTVYPIEK Sbjct: 106 TQDKCVACKKTVYPIEK 122 >ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Brachypodium distachyon] Length = 1888 Score = 116 bits (291), Expect(2) = 5e-29 Identities = 69/121 (57%), Positives = 78/121 (64%), Gaps = 16/121 (13%) Frame = +1 Query: 40 SRVT*IKYPQKHEGQLTRMRQQMVSNMVLYQFALNKRLQSFIQADPFAPSRWATPGVLPV 219 SR +KYPQKHEGQLTRMRQQMVSNMVLYQFALNK LQS+IQAD FAPSRWA PGVLPV Sbjct: 1372 SRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALNKTLQSYIQADRFAPSRWAAPGVLPV 1431 Query: 220 FD----EADTFIFGER------------GRSADTESEKGHRIRKGSPCYRLSNYSSFEGV 351 FD E++ IFGE AD+ E G I S CYR+ + + V Sbjct: 1432 FDEETRESEPSIFGEEPVLGNEVQKDFDDDYADSIQEDG-EIDGDSGCYRVLSSKTLADV 1490 Query: 352 L 354 + Sbjct: 1491 V 1491 Score = 37.7 bits (86), Expect(2) = 5e-29 Identities = 16/16 (100%), Positives = 16/16 (100%) Frame = +2 Query: 2 TAASCQETFCYERAEL 49 TAASCQETFCYERAEL Sbjct: 1346 TAASCQETFCYERAEL 1361 >ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|222844405|gb|EEE81952.1| dicer-like protein [Populus trichocarpa] Length = 1817 Score = 116 bits (291), Expect(2) = 5e-29 Identities = 59/88 (67%), Positives = 67/88 (76%), Gaps = 4/88 (4%) Frame = +1 Query: 40 SRVT*IKYPQKHEGQLTRMRQQMVSNMVLYQFALNKRLQSFIQADPFAPSRWATPGVLPV 219 SR +KYPQKHEGQLTRMRQQMVSNMVLYQ+ALNK LQS+IQAD FAPSRWA PGVLPV Sbjct: 1350 SRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQADRFAPSRWAAPGVLPV 1409 Query: 220 FDE----ADTFIFGERGRSADTESEKGH 291 FDE D++IF + A+ + H Sbjct: 1410 FDEETKDGDSYIFDQEKSLAEDRTGMNH 1437 Score = 37.7 bits (86), Expect(2) = 5e-29 Identities = 16/16 (100%), Positives = 16/16 (100%) Frame = +2 Query: 2 TAASCQETFCYERAEL 49 TAASCQETFCYERAEL Sbjct: 1324 TAASCQETFCYERAEL 1339 >gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indica Group] Length = 1883 Score = 115 bits (288), Expect(2) = 1e-28 Identities = 64/119 (53%), Positives = 75/119 (63%), Gaps = 14/119 (11%) Frame = +1 Query: 40 SRVT*IKYPQKHEGQLTRMRQQMVSNMVLYQFALNKRLQSFIQADPFAPSRWATPGVLPV 219 SR +KYPQKHEGQLTRMRQQMVSNMVLYQ+ALNK LQS+IQAD FAPSRWA PGVLPV Sbjct: 1368 SRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFAPSRWAAPGVLPV 1427 Query: 220 FDEA----DTFIFGERGRSADTESE----------KGHRIRKGSPCYRLSNYSSFEGVL 354 FDE + IF E + + E + I S CYR+ + + V+ Sbjct: 1428 FDEESREYEPSIFDEESTGCELQKESYDDYADNMQEDGEIEGDSSCYRVLSSKTLADVV 1486 Score = 37.7 bits (86), Expect(2) = 1e-28 Identities = 16/16 (100%), Positives = 16/16 (100%) Frame = +2 Query: 2 TAASCQETFCYERAEL 49 TAASCQETFCYERAEL Sbjct: 1342 TAASCQETFCYERAEL 1357 >ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera] gi|297733831|emb|CBI15078.3| unnamed protein product [Vitis vinifera] Length = 182 Score = 130 bits (327), Expect = 4e-28 Identities = 69/104 (66%), Positives = 75/104 (72%), Gaps = 10/104 (9%) Frame = +1 Query: 319 RLSNYSSFEGVLYCKPHFDQLFKRTGSLDKSFESAPRAVKVDKSVDEGHANSKVSNMFGG 498 +LSNYSSFEGVLYCKPHFDQLFK TGSLDKSFE AP+ V +SVD+G NSKVS+MF G Sbjct: 46 KLSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGAPKTV---RSVDQGQTNSKVSSMFAG 102 Query: 499 TQDKCVACKKTVYPIEK*NA*WLSCVAFC----------SPSNY 600 TQ+KCVACKKTVYPIEK S C SPSNY Sbjct: 103 TQEKCVACKKTVYPIEKVGVDGTSYHKACFRCTHGGCTISPSNY 146