BLASTX nr result
ID: Coptis21_contig00003155
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003155 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33 ref|XP_002524479.1| pentatricopeptide repeat-containing protein,... 143 2e-32 ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containi... 136 2e-30 ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containi... 131 7e-29 ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|2... 130 9e-29 >ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Vitis vinifera] Length = 773 Score = 145 bits (365), Expect = 4e-33 Identities = 68/108 (62%), Positives = 83/108 (76%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145 WN+MLSG Q+G LE I VF+ M++EG+KLD VSF+ ++ACGH + ELGR IH Sbjct: 245 WNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLA 304 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 +K GY+THV VCNVLIS YSKCE +EDA VFES+I+RNVVSWTT IS Sbjct: 305 VKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS 352 Score = 65.5 bits (158), Expect = 4e-09 Identities = 35/108 (32%), Positives = 58/108 (53%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145 WN++LSG + + + + M G+ D V+ ++V+A C G +H I Sbjct: 147 WNTVLSGFQRSD----DALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRI 202 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 LK G + V V N LI+MYS+C + +A +VF+ M +++VSW +S Sbjct: 203 LKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLS 250 Score = 60.1 bits (144), Expect = 2e-07 Identities = 35/108 (32%), Positives = 61/108 (56%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145 W +M+S +D +F M R+G+ + V+F ++ A + +E G+ IH Sbjct: 347 WTTMISISEEDATS------LFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVC 400 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 +KT + + ++V N LI+MY+K E + D+ KVFE + R ++SW + IS Sbjct: 401 VKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLIS 448 >ref|XP_002524479.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223536267|gb|EEF37919.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 576 Score = 143 bits (360), Expect = 2e-32 Identities = 67/108 (62%), Positives = 86/108 (79%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145 WN+++SG TQ G + LE I +F+ MVR G+KLD VSF+S ++ACGHER+LE+GR +H Sbjct: 245 WNAIISGYTQAGIYGLEAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEVGRQVHGLS 304 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 +K GY HVSV NVLIS YSKCE++EDA VF++M+ERNVVSWTT IS Sbjct: 305 IKRGYGKHVSVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSWTTMIS 352 Score = 66.6 bits (161), Expect = 2e-09 Identities = 37/108 (34%), Positives = 58/108 (53%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145 WN++LSG + + E + + M G+ D V++++V+A C G +H I Sbjct: 147 WNTVLSGF----QRSEEALNFALKMNSNGVVFDAVTYTTVLAFCSRIEEFLFGLQLHSCI 202 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 LK G + V V N LI+MYS+ + +A +VFE M ++VSW IS Sbjct: 203 LKVGLDCEVFVGNALITMYSRWGCLLEAGRVFEEMQTTDLVSWNAIIS 250 >ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like [Cucumis sativus] Length = 781 Score = 136 bits (342), Expect = 2e-30 Identities = 62/108 (57%), Positives = 83/108 (76%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145 W++M++G Q+G + L+ I VF+ MVREG+K D V + ++ CGHER+LELG+ IHC Sbjct: 240 WSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLA 299 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 +KTG+ETH SV NVLIS YSKCE++EDA VFE + +RNV+SWTT IS Sbjct: 300 VKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMIS 347 Score = 63.2 bits (152), Expect = 2e-08 Identities = 35/108 (32%), Positives = 59/108 (54%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145 WN++LSG + +R+ + G+K D V++++ ++ C G +H Sbjct: 142 WNTILSGFEKSENALSFALRMNLN----GVKFDSVTYTTALSFCLDGEEFLFGWQLHTLA 197 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 LK G++ V V N L++MYS+ E + DA KVF+ M R+ VSW+ I+ Sbjct: 198 LKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMIT 245 Score = 60.8 bits (146), Expect = 1e-07 Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 3/108 (2%) Frame = -2 Query: 315 MLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVA---ACGHERSLELGRGIHCSI 145 +L+ L +DG A + +R F R GL + F+ V+A CG + LGR IH + Sbjct: 45 LLNYLPRDG--AFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGFPK---LGRQIHGFV 99 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 + +G+ +H++V N L++MY K +E A VF+++ + ++VSW T +S Sbjct: 100 ISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILS 147 >ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like [Glycine max] Length = 895 Score = 131 bits (329), Expect = 7e-29 Identities = 64/109 (58%), Positives = 81/109 (74%), Gaps = 1/109 (0%) Frame = -2 Query: 324 WNSMLSGLTQDGR-HALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCS 148 WN+M+SG Q+G+ + LE + +F+ MVR G+ +D VS + V+ACGH ++LELGR IH Sbjct: 244 WNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGL 303 Query: 147 ILKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 K GY THVSVCNVL+S YSKCEV +DA VFES+ RNVVSWTT IS Sbjct: 304 TQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMIS 352 Score = 65.9 bits (159), Expect = 3e-09 Identities = 33/108 (30%), Positives = 61/108 (56%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145 WN++LSG + +++ + M G+ D V+++S +A C + G +H + Sbjct: 146 WNTVLSGFEE----SVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLV 201 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 +K G V + N L++MYS+ ++++A +VF+ M ER++VSW IS Sbjct: 202 VKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMIS 249 Score = 59.3 bits (142), Expect = 3e-07 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVV--AACGHERSLELGRGIHC 151 WN+++SG Q+G + E + ++ V+E +K + +F SV+ A + SL G+ H Sbjct: 443 WNALISGYAQNGSYK-EALLTYLSAVKE-IKPNQYTFGSVLNAIAAAEDISLNHGKSCHS 500 Query: 150 SILKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 +LK G T V L+ MY K + ++ +VF +ER +WT IS Sbjct: 501 HLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIIS 550 >ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa] Length = 770 Score = 130 bits (328), Expect = 9e-29 Identities = 62/108 (57%), Positives = 84/108 (77%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145 WN+M+SG +Q+G + LE I +F+ M R G++LD +SF+S V+ACG+E++LEL R IH Sbjct: 233 WNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLS 292 Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 +KT +E HV+V NVLIS Y KC+V+EDA VF++M ERNVVSWTT IS Sbjct: 293 IKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS 340 Score = 60.5 bits (145), Expect = 1e-07 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGH--ERSLELGRGIHC 151 WN++LSG + + + M G+ D V++++V++ C E +G +H Sbjct: 133 WNTVLSGC----QTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHS 188 Query: 150 SILKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 I+K G++ V V N LISMYS+ + +A +VFE M R++VSW IS Sbjct: 189 CIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMIS 238 Score = 57.8 bits (138), Expect = 9e-07 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Frame = -2 Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACG--HERSLELGRGIHC 151 WN+++SG +G E IR F + E K + SF S++ A G + SL+ G+ H Sbjct: 431 WNALISGFVHNGL-CQEAIRAFFSGLIES-KPNQYSFGSILNAIGAAEDVSLKYGQRCHS 488 Query: 150 SILKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1 I+K G T V + L+ MY+K + ++ KVF +++ +WTT IS Sbjct: 489 QIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIIS 538