BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003155
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_002524479.1| pentatricopeptide repeat-containing protein,...   143   2e-32
ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containi...   131   7e-29
ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29

>ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/108 (62%), Positives = 83/108 (76%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145
           WN+MLSG  Q+G   LE I VF+ M++EG+KLD VSF+  ++ACGH +  ELGR IH   
Sbjct: 245 WNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLA 304

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           +K GY+THV VCNVLIS YSKCE +EDA  VFES+I+RNVVSWTT IS
Sbjct: 305 VKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS 352



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/108 (32%), Positives = 58/108 (53%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145
           WN++LSG  +      + +   + M   G+  D V+ ++V+A C        G  +H  I
Sbjct: 147 WNTVLSGFQRSD----DALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRI 202

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           LK G +  V V N LI+MYS+C  + +A +VF+ M  +++VSW   +S
Sbjct: 203 LKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLS 250



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/108 (32%), Positives = 61/108 (56%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145
           W +M+S   +D         +F  M R+G+  + V+F  ++ A   +  +E G+ IH   
Sbjct: 347 WTTMISISEEDATS------LFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVC 400

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           +KT + + ++V N LI+MY+K E + D+ KVFE +  R ++SW + IS
Sbjct: 401 VKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLIS 448


>ref|XP_002524479.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536267|gb|EEF37919.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 576

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/108 (62%), Positives = 86/108 (79%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145
           WN+++SG TQ G + LE I +F+ MVR G+KLD VSF+S ++ACGHER+LE+GR +H   
Sbjct: 245 WNAIISGYTQAGIYGLEAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEVGRQVHGLS 304

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           +K GY  HVSV NVLIS YSKCE++EDA  VF++M+ERNVVSWTT IS
Sbjct: 305 IKRGYGKHVSVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSWTTMIS 352



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/108 (34%), Positives = 58/108 (53%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145
           WN++LSG     + + E +   + M   G+  D V++++V+A C        G  +H  I
Sbjct: 147 WNTVLSGF----QRSEEALNFALKMNSNGVVFDAVTYTTVLAFCSRIEEFLFGLQLHSCI 202

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           LK G +  V V N LI+MYS+   + +A +VFE M   ++VSW   IS
Sbjct: 203 LKVGLDCEVFVGNALITMYSRWGCLLEAGRVFEEMQTTDLVSWNAIIS 250


>ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/108 (57%), Positives = 83/108 (76%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145
           W++M++G  Q+G + L+ I VF+ MVREG+K D V  +  ++ CGHER+LELG+ IHC  
Sbjct: 240 WSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLA 299

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           +KTG+ETH SV NVLIS YSKCE++EDA  VFE + +RNV+SWTT IS
Sbjct: 300 VKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMIS 347



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/108 (32%), Positives = 59/108 (54%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145
           WN++LSG  +        +R+ +     G+K D V++++ ++ C        G  +H   
Sbjct: 142 WNTILSGFEKSENALSFALRMNLN----GVKFDSVTYTTALSFCLDGEEFLFGWQLHTLA 197

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           LK G++  V V N L++MYS+ E + DA KVF+ M  R+ VSW+  I+
Sbjct: 198 LKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMIT 245



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = -2

Query: 315 MLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVA---ACGHERSLELGRGIHCSI 145
           +L+ L +DG  A + +R F    R GL  +   F+ V+A    CG  +   LGR IH  +
Sbjct: 45  LLNYLPRDG--AFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGFPK---LGRQIHGFV 99

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           + +G+ +H++V N L++MY K   +E A  VF+++ + ++VSW T +S
Sbjct: 100 ISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILS 147


>ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/109 (58%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
 Frame = -2

Query: 324 WNSMLSGLTQDGR-HALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCS 148
           WN+M+SG  Q+G+ + LE + +F+ MVR G+ +D VS +  V+ACGH ++LELGR IH  
Sbjct: 244 WNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGL 303

Query: 147 ILKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
             K GY THVSVCNVL+S YSKCEV +DA  VFES+  RNVVSWTT IS
Sbjct: 304 TQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMIS 352



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/108 (30%), Positives = 61/108 (56%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145
           WN++LSG  +    +++ +     M   G+  D V+++S +A C  +     G  +H  +
Sbjct: 146 WNTVLSGFEE----SVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLV 201

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           +K G    V + N L++MYS+  ++++A +VF+ M ER++VSW   IS
Sbjct: 202 VKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMIS 249



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVV--AACGHERSLELGRGIHC 151
           WN+++SG  Q+G +  E +  ++  V+E +K +  +F SV+   A   + SL  G+  H 
Sbjct: 443 WNALISGYAQNGSYK-EALLTYLSAVKE-IKPNQYTFGSVLNAIAAAEDISLNHGKSCHS 500

Query: 150 SILKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
            +LK G  T   V   L+ MY K   + ++ +VF   +ER   +WT  IS
Sbjct: 501 HLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIIS 550


>ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|222866931|gb|EEF04062.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/108 (57%), Positives = 84/108 (77%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGHERSLELGRGIHCSI 145
           WN+M+SG +Q+G + LE I +F+ M R G++LD +SF+S V+ACG+E++LEL R IH   
Sbjct: 233 WNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLS 292

Query: 144 LKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
           +KT +E HV+V NVLIS Y KC+V+EDA  VF++M ERNVVSWTT IS
Sbjct: 293 IKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS 340



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACGH--ERSLELGRGIHC 151
           WN++LSG     + + +       M   G+  D V++++V++ C    E    +G  +H 
Sbjct: 133 WNTVLSGC----QTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHS 188

Query: 150 SILKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
            I+K G++  V V N LISMYS+   + +A +VFE M  R++VSW   IS
Sbjct: 189 CIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMIS 238



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
 Frame = -2

Query: 324 WNSMLSGLTQDGRHALEGIRVFMGMVREGLKLDLVSFSSVVAACG--HERSLELGRGIHC 151
           WN+++SG   +G    E IR F   + E  K +  SF S++ A G   + SL+ G+  H 
Sbjct: 431 WNALISGFVHNGL-CQEAIRAFFSGLIES-KPNQYSFGSILNAIGAAEDVSLKYGQRCHS 488

Query: 150 SILKTGYETHVSVCNVLISMYSKCEVVEDANKVFESMIERNVVSWTTAIS 1
            I+K G  T   V + L+ MY+K   + ++ KVF    +++  +WTT IS
Sbjct: 489 QIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIIS 538