BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003150
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...    80   2e-13
ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...    79   3e-13
ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [...    77   2e-12
ref|XP_002308530.1| predicted protein [Populus trichocarpa] gi|1...    76   2e-12
ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3-like [...    76   3e-12

>ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297743020|emb|CBI35887.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 3   LDWDPKGKQGPMTPLPDLVTIHMPKDEEEYVRPALMATEIDVAAA 137
           LDWDPKGKQGP TPLPDLVTIH PK+EEEY+RP + A +I+VAAA
Sbjct: 190 LDWDPKGKQGPKTPLPDLVTIHTPKEEEEYLRPPIPAADIEVAAA 234


>ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297738588|emb|CBI27833.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   LDWDPKGKQGPMTPLPDLVTIHMPKDEEEYVRPALMATEIDVAAA 137
           LDWDPKGKQGP TPLPDLVTIH PK+EEEY+RP  +AT+I+V  A
Sbjct: 190 LDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPEKLATDIEVPTA 234


>ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
          Length = 235

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +3

Query: 3   LDWDPKGKQGPMTPLPDLVTIHMPKDEEEYVRP-ALMATEIDVAAA 137
           LDWDPKGKQGP TPLPDLVTIH PK+EEEY RP A++AT+I+V  A
Sbjct: 190 LDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATDIEVPVA 235


>ref|XP_002308530.1| predicted protein [Populus trichocarpa] gi|118483836|gb|ABK93809.1|
           unknown [Populus trichocarpa]
           gi|118485378|gb|ABK94546.1| unknown [Populus
           trichocarpa] gi|222854506|gb|EEE92053.1| predicted
           protein [Populus trichocarpa]
          Length = 236

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = +3

Query: 3   LDWDPKGKQGPMTPLPDLVTIHMPKDEEEYVRPALMATEIDVAAA 137
           LDWDPKGK GPMTPLPDLVTIH PK+EEEYV P +M T I++  A
Sbjct: 190 LDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVAPPVMTTNIEIPVA 234


>ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
          Length = 236

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/46 (76%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = +3

Query: 3   LDWDPKGKQGPMTPLPDLVTIHMPKDEEEYVRP-ALMATEIDVAAA 137
           LDWDPKGKQGP TPLPDLVTIH PK+EEEY RP A++AT I+V  A
Sbjct: 190 LDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATNIEVPVA 235