BLASTX nr result
ID: Coptis21_contig00003147
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003147 (1087 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635074.1| PREDICTED: uncharacterized protein LOC100855... 277 3e-72 emb|CBI40929.3| unnamed protein product [Vitis vinifera] 269 8e-70 ref|XP_002524363.1| transcription factor, putative [Ricinus comm... 266 5e-69 ref|XP_002326480.1| light harvesting-like protein 3 [Populus tri... 266 5e-69 ref|XP_002329601.1| light harvesting-like protein 3 [Populus tri... 264 3e-68 >ref|XP_003635074.1| PREDICTED: uncharacterized protein LOC100855146 [Vitis vinifera] Length = 251 Score = 277 bits (709), Expect = 3e-72 Identities = 140/225 (62%), Positives = 156/225 (69%), Gaps = 3/225 (1%) Frame = +3 Query: 126 KPHYLQRPYLSSLCKKKDLIFLSIKAT--GDGTMGSAXXXXXXXXXXXXXXXXXXXAS-N 296 KP++ +P L KK L+ LS KAT G GT SA + N Sbjct: 20 KPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTSTSATTVEPEKAEEKAPEAAVLDSQPN 79 Query: 297 GXXXXXXXXXXXXFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESSNN 476 G F D +W+GGTWDLKQF DGKTNWDAVIDAEVRRRKWL+DNPESS+N Sbjct: 80 GAAAAGDVVLVTKFEDLKWVGGTWDLKQFETDGKTNWDAVIDAEVRRRKWLEDNPESSSN 139 Query: 477 DEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFC 656 D+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFC Sbjct: 140 DDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFC 199 Query: 657 KTXXXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDET 791 KT RKNED+E LK L+ ETT YDKQWQA+W+DET Sbjct: 200 KTLLFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDET 244 >emb|CBI40929.3| unnamed protein product [Vitis vinifera] Length = 227 Score = 269 bits (688), Expect = 8e-70 Identities = 134/222 (60%), Positives = 152/222 (68%) Frame = +3 Query: 126 KPHYLQRPYLSSLCKKKDLIFLSIKATGDGTMGSAXXXXXXXXXXXXXXXXXXXASNGXX 305 KP++ +P L KK L+ LS KAT +G S ++ Sbjct: 18 KPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTST-------------------SATTVE 58 Query: 306 XXXXXXXXXXFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESSNNDEP 485 D +W+GGTWDLKQF DGKTNWDAVIDAEVRRRKWL+DNPESS+ND+P Sbjct: 59 PEKAEEKAPEAADLKWVGGTWDLKQFETDGKTNWDAVIDAEVRRRKWLEDNPESSSNDDP 118 Query: 486 VVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKTX 665 VVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKT Sbjct: 119 VVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKTL 178 Query: 666 XXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDET 791 RKNED+E LK L+ ETT YDKQWQA+W+DET Sbjct: 179 LFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDET 220 >ref|XP_002524363.1| transcription factor, putative [Ricinus communis] gi|223536324|gb|EEF37974.1| transcription factor, putative [Ricinus communis] Length = 259 Score = 266 bits (681), Expect = 5e-69 Identities = 123/167 (73%), Positives = 133/167 (79%) Frame = +3 Query: 291 SNGXXXXXXXXXXXXFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESS 470 SNG F DPRWIGGTWDLKQF KDG T+WD+VIDAEVRRRKWL+ NPESS Sbjct: 86 SNGAVKDAEVKLESKFVDPRWIGGTWDLKQFQKDGSTDWDSVIDAEVRRRKWLESNPESS 145 Query: 471 NNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNF 650 ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAM+GFFMAY VDSLTGVGLVDQMGNF Sbjct: 146 TNDDPVVFDTSIIPWWAWMKRFHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVDQMGNF 205 Query: 651 FCKTXXXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDET 791 FCKT RKNED+E LK L+ ETT YDKQWQATW+DET Sbjct: 206 FCKTLLFIAVAGVLLIRKNEDIETLKKLVDETTFYDKQWQATWQDET 252 >ref|XP_002326480.1| light harvesting-like protein 3 [Populus trichocarpa] gi|118482026|gb|ABK92944.1| unknown [Populus trichocarpa] gi|222833802|gb|EEE72279.1| light harvesting-like protein 3 [Populus trichocarpa] Length = 257 Score = 266 bits (681), Expect = 5e-69 Identities = 121/153 (79%), Positives = 134/153 (87%) Frame = +3 Query: 336 FGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESSNNDEPVVFDTSIIPW 515 F DPRWI GTWDLKQF KDGKT+WDAVIDAEVRRRKWL+ NPESS+ND+PVVFDTSIIPW Sbjct: 99 FEDPRWISGTWDLKQFEKDGKTDWDAVIDAEVRRRKWLEGNPESSSNDDPVVFDTSIIPW 158 Query: 516 WSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKTXXXXXXXXXXX 695 W+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG+VDQMGNFFCKT Sbjct: 159 WAWMKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGVVDQMGNFFCKTLLFVAVVGVLL 218 Query: 696 XRKNEDVENLKNLLQETTLYDKQWQATWKDETT 794 RKNED+E +K LL+ETT YD+QWQATW+DET+ Sbjct: 219 IRKNEDLETIKTLLEETTFYDRQWQATWQDETS 251 >ref|XP_002329601.1| light harvesting-like protein 3 [Populus trichocarpa] gi|222870310|gb|EEF07441.1| light harvesting-like protein 3 [Populus trichocarpa] Length = 258 Score = 264 bits (675), Expect = 3e-68 Identities = 121/151 (80%), Positives = 131/151 (86%) Frame = +3 Query: 336 FGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESSNNDEPVVFDTSIIPW 515 FGDPRWI GTWDLKQF KDGKT+WDAVIDAE RRRKWLQ NPESS+N++PVVFDTSIIPW Sbjct: 100 FGDPRWISGTWDLKQFQKDGKTDWDAVIDAEARRRKWLQCNPESSSNNDPVVFDTSIIPW 159 Query: 516 WSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKTXXXXXXXXXXX 695 W+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM NFFCKT Sbjct: 160 WTWMKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLL 219 Query: 696 XRKNEDVENLKNLLQETTLYDKQWQATWKDE 788 RKNED+E +K LL+ETT YDKQWQATW+DE Sbjct: 220 IRKNEDLETIKKLLEETTFYDKQWQATWQDE 250