BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003147
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635074.1| PREDICTED: uncharacterized protein LOC100855...   277   3e-72
emb|CBI40929.3| unnamed protein product [Vitis vinifera]              269   8e-70
ref|XP_002524363.1| transcription factor, putative [Ricinus comm...   266   5e-69
ref|XP_002326480.1| light harvesting-like protein 3 [Populus tri...   266   5e-69
ref|XP_002329601.1| light harvesting-like protein 3 [Populus tri...   264   3e-68

>ref|XP_003635074.1| PREDICTED: uncharacterized protein LOC100855146 [Vitis vinifera]
          Length = 251

 Score =  277 bits (709), Expect = 3e-72
 Identities = 140/225 (62%), Positives = 156/225 (69%), Gaps = 3/225 (1%)
 Frame = +3

Query: 126 KPHYLQRPYLSSLCKKKDLIFLSIKAT--GDGTMGSAXXXXXXXXXXXXXXXXXXXAS-N 296
           KP++  +P L    KK  L+ LS KAT  G GT  SA                   +  N
Sbjct: 20  KPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTSTSATTVEPEKAEEKAPEAAVLDSQPN 79

Query: 297 GXXXXXXXXXXXXFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESSNN 476
           G            F D +W+GGTWDLKQF  DGKTNWDAVIDAEVRRRKWL+DNPESS+N
Sbjct: 80  GAAAAGDVVLVTKFEDLKWVGGTWDLKQFETDGKTNWDAVIDAEVRRRKWLEDNPESSSN 139

Query: 477 DEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFC 656
           D+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFC
Sbjct: 140 DDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFC 199

Query: 657 KTXXXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDET 791
           KT            RKNED+E LK L+ ETT YDKQWQA+W+DET
Sbjct: 200 KTLLFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDET 244


>emb|CBI40929.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  269 bits (688), Expect = 8e-70
 Identities = 134/222 (60%), Positives = 152/222 (68%)
 Frame = +3

Query: 126 KPHYLQRPYLSSLCKKKDLIFLSIKATGDGTMGSAXXXXXXXXXXXXXXXXXXXASNGXX 305
           KP++  +P L    KK  L+ LS KAT +G   S                    ++    
Sbjct: 18  KPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTST-------------------SATTVE 58

Query: 306 XXXXXXXXXXFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESSNNDEP 485
                       D +W+GGTWDLKQF  DGKTNWDAVIDAEVRRRKWL+DNPESS+ND+P
Sbjct: 59  PEKAEEKAPEAADLKWVGGTWDLKQFETDGKTNWDAVIDAEVRRRKWLEDNPESSSNDDP 118

Query: 486 VVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKTX 665
           VVFDTSIIPWW+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKT 
Sbjct: 119 VVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKTL 178

Query: 666 XXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDET 791
                      RKNED+E LK L+ ETT YDKQWQA+W+DET
Sbjct: 179 LFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDET 220


>ref|XP_002524363.1| transcription factor, putative [Ricinus communis]
           gi|223536324|gb|EEF37974.1| transcription factor,
           putative [Ricinus communis]
          Length = 259

 Score =  266 bits (681), Expect = 5e-69
 Identities = 123/167 (73%), Positives = 133/167 (79%)
 Frame = +3

Query: 291 SNGXXXXXXXXXXXXFGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESS 470
           SNG            F DPRWIGGTWDLKQF KDG T+WD+VIDAEVRRRKWL+ NPESS
Sbjct: 86  SNGAVKDAEVKLESKFVDPRWIGGTWDLKQFQKDGSTDWDSVIDAEVRRRKWLESNPESS 145

Query: 471 NNDEPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNF 650
            ND+PVVFDTSIIPWW+W+KRFHLPEAELLNGRAAM+GFFMAY VDSLTGVGLVDQMGNF
Sbjct: 146 TNDDPVVFDTSIIPWWAWMKRFHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVDQMGNF 205

Query: 651 FCKTXXXXXXXXXXXXRKNEDVENLKNLLQETTLYDKQWQATWKDET 791
           FCKT            RKNED+E LK L+ ETT YDKQWQATW+DET
Sbjct: 206 FCKTLLFIAVAGVLLIRKNEDIETLKKLVDETTFYDKQWQATWQDET 252


>ref|XP_002326480.1| light harvesting-like protein 3 [Populus trichocarpa]
           gi|118482026|gb|ABK92944.1| unknown [Populus
           trichocarpa] gi|222833802|gb|EEE72279.1| light
           harvesting-like protein 3 [Populus trichocarpa]
          Length = 257

 Score =  266 bits (681), Expect = 5e-69
 Identities = 121/153 (79%), Positives = 134/153 (87%)
 Frame = +3

Query: 336 FGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESSNNDEPVVFDTSIIPW 515
           F DPRWI GTWDLKQF KDGKT+WDAVIDAEVRRRKWL+ NPESS+ND+PVVFDTSIIPW
Sbjct: 99  FEDPRWISGTWDLKQFEKDGKTDWDAVIDAEVRRRKWLEGNPESSSNDDPVVFDTSIIPW 158

Query: 516 WSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKTXXXXXXXXXXX 695
           W+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG+VDQMGNFFCKT           
Sbjct: 159 WAWMKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGVVDQMGNFFCKTLLFVAVVGVLL 218

Query: 696 XRKNEDVENLKNLLQETTLYDKQWQATWKDETT 794
            RKNED+E +K LL+ETT YD+QWQATW+DET+
Sbjct: 219 IRKNEDLETIKTLLEETTFYDRQWQATWQDETS 251


>ref|XP_002329601.1| light harvesting-like protein 3 [Populus trichocarpa]
           gi|222870310|gb|EEF07441.1| light harvesting-like
           protein 3 [Populus trichocarpa]
          Length = 258

 Score =  264 bits (675), Expect = 3e-68
 Identities = 121/151 (80%), Positives = 131/151 (86%)
 Frame = +3

Query: 336 FGDPRWIGGTWDLKQFGKDGKTNWDAVIDAEVRRRKWLQDNPESSNNDEPVVFDTSIIPW 515
           FGDPRWI GTWDLKQF KDGKT+WDAVIDAE RRRKWLQ NPESS+N++PVVFDTSIIPW
Sbjct: 100 FGDPRWISGTWDLKQFQKDGKTDWDAVIDAEARRRKWLQCNPESSSNNDPVVFDTSIIPW 159

Query: 516 WSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKTXXXXXXXXXXX 695
           W+W+KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM NFFCKT           
Sbjct: 160 WTWMKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLL 219

Query: 696 XRKNEDVENLKNLLQETTLYDKQWQATWKDE 788
            RKNED+E +K LL+ETT YDKQWQATW+DE
Sbjct: 220 IRKNEDLETIKKLLEETTFYDKQWQATWQDE 250