BLASTX nr result
ID: Coptis21_contig00003135
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003135 (1197 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524784.1| PREDICTED: tubulin beta-1 chain-like [Glycin... 582 e-164 gb|ABY86660.1| beta-tubulin 14 [Gossypium hirsutum] 582 e-164 ref|XP_003531075.1| PREDICTED: tubulin beta-1 chain-like [Glycin... 582 e-164 ref|XP_003594596.1| Tubulin beta chain [Medicago truncatula] gi|... 580 e-163 gb|ACM89774.1| beta-tubulin 14 [Gossypium hirsutum] 580 e-163 >ref|XP_003524784.1| PREDICTED: tubulin beta-1 chain-like [Glycine max] Length = 442 Score = 582 bits (1501), Expect = e-164 Identities = 286/302 (94%), Positives = 287/302 (95%) Frame = +1 Query: 1 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSD 180 DVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSD Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177 Query: 181 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGST 360 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSG T Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237 Query: 361 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDSK 540 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDSK Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDSK 297 Query: 541 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 720 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357 Query: 721 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 900 PKGLKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND Sbjct: 358 PKGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417 Query: 901 LV 906 LV Sbjct: 418 LV 419 >gb|ABY86660.1| beta-tubulin 14 [Gossypium hirsutum] Length = 445 Score = 582 bits (1501), Expect = e-164 Identities = 286/302 (94%), Positives = 287/302 (95%) Frame = +1 Query: 1 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSD 180 DVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSD Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177 Query: 181 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGST 360 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSG T Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237 Query: 361 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDSK 540 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWD+K Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAK 297 Query: 541 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 720 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357 Query: 721 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 900 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND Sbjct: 358 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417 Query: 901 LV 906 LV Sbjct: 418 LV 419 >ref|XP_003531075.1| PREDICTED: tubulin beta-1 chain-like [Glycine max] Length = 443 Score = 582 bits (1499), Expect = e-164 Identities = 285/302 (94%), Positives = 287/302 (95%) Frame = +1 Query: 1 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSD 180 DVVRKEAENCDC+QGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSD Sbjct: 118 DVVRKEAENCDCMQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177 Query: 181 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGST 360 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSG T Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237 Query: 361 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDSK 540 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDSK Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDSK 297 Query: 541 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 720 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357 Query: 721 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 900 PKGLKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND Sbjct: 358 PKGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417 Query: 901 LV 906 LV Sbjct: 418 LV 419 >ref|XP_003594596.1| Tubulin beta chain [Medicago truncatula] gi|355483644|gb|AES64847.1| Tubulin beta chain [Medicago truncatula] Length = 445 Score = 580 bits (1496), Expect = e-163 Identities = 286/302 (94%), Positives = 286/302 (94%) Frame = +1 Query: 1 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSD 180 DVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSD Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177 Query: 181 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGST 360 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSG T Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237 Query: 361 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDSK 540 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR LTVPELTQQMWDSK Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSK 297 Query: 541 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 720 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357 Query: 721 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 900 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND Sbjct: 358 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417 Query: 901 LV 906 LV Sbjct: 418 LV 419 >gb|ACM89774.1| beta-tubulin 14 [Gossypium hirsutum] Length = 445 Score = 580 bits (1494), Expect = e-163 Identities = 285/302 (94%), Positives = 286/302 (94%) Frame = +1 Query: 1 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSD 180 DVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSD Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177 Query: 181 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGST 360 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSG T Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237 Query: 361 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDSK 540 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFM GFAPLTSRGSQQYRNLTVPELTQQMWD+K Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMDGFAPLTSRGSQQYRNLTVPELTQQMWDAK 297 Query: 541 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 720 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357 Query: 721 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 900 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND Sbjct: 358 PKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417 Query: 901 LV 906 LV Sbjct: 418 LV 419