BLASTX nr result

ID: Coptis21_contig00003095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003095
         (1839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30061.3| unnamed protein product [Vitis vinifera]              179   6e-43
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   179   2e-42
ref|XP_002530101.1| conserved hypothetical protein [Ricinus comm...   168   5e-39
ref|XP_002332417.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-37
ref|XP_004136680.1| PREDICTED: uncharacterized protein LOC101209...   157   1e-35

>emb|CBI30061.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  179 bits (455), Expect(2) = 6e-43
 Identities = 125/366 (34%), Positives = 177/366 (48%), Gaps = 12/366 (3%)
 Frame = +1

Query: 292  DYRKQPPQQAGSW-QQPSGPSWEPAQPNVPSWEKKFVTTVGRIPWGRLVHAHKDLYLYKD 468
            DY  Q  Q+  S  ++P   +W   QP VPSWEKKF ++VG   W RL+   + +YLY +
Sbjct: 9    DYHHQESQKTRSLNRKPPLGNW---QPTVPSWEKKFCSSVGSFSWQRLLENKRFIYLYDN 65

Query: 469  VLQWDDSAGEEAFHNAKARYWAMINRLPCEISIPNPDMYIDEIYWNAEVDHQLYLDLEKV 648
            VLQW+DSAGEEAFHNAK R+WA IN LPC+IS+P+PD+YIDEI WN  +D ++ LDLE+ 
Sbjct: 66   VLQWNDSAGEEAFHNAKNRFWAQINGLPCDISLPDPDIYIDEIDWNCSIDPEMILDLERE 125

Query: 649  PEFSGVETKD-VNADKVVNTNNYQDQPIVPTXXXXXXXXXXXXXKNASNKNNPWTVQYGK 825
            P    V+  D V ++KV +  N                      K A   + P     G 
Sbjct: 126  P----VDPDDCVKSEKVSSLGNSLLLLNQSFSCTGWGDAEEDIGKAADIPSGP-----GL 176

Query: 826  TNTNTWDDVPWGLNSLMK--PIITSEGGDGDDYPSRTSNKLSPPLDQPIVPSGWGG-DEP 996
             + N   D PW L+      P+  +  G+ ++    T    S   ++P+  +GWG  D  
Sbjct: 177  WHHNQNVDNPWELSCTQNKGPVEATGWGNTNEPVKATGWGNS---NEPVKATGWGDWDHQ 233

Query: 997  NLQGGNKKGINKDNPWESSCGGWEAVPWGSNTLTNKACNQFENLTNSWGSGNQRRENDNW 1176
             ++            W    G  E   W      +   NQ+EN  N   +   RR    W
Sbjct: 234  PVEA---------TGWGDYYGAMEVPIWKDGWNNSSGWNQYENKYNDLENLKDRRAGGVW 284

Query: 1177 -----RKRESDGQHMSRYKTTRFQGDYYQTSNGWRSNRGKKRVTFTHEQSPM--EPWAPQ 1335
                   R  +  +MSRY+++RF  + YQ   GWRS  G+KR  F  ++     +  A Q
Sbjct: 285  GTGNGNSRGEEVGYMSRYRSSRFHDNEYQADRGWRSG-GRKRANFLFDEGSFLDKKAASQ 343

Query: 1336 QWNSIH 1353
              N+IH
Sbjct: 344  PRNTIH 349



 Score = 23.1 bits (48), Expect(2) = 6e-43
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 1361 GLIGCHWPCEAGTAWSWK 1414
            G +  H   +AG +WSWK
Sbjct: 352  GPVSHHGSGKAGNSWSWK 369


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  179 bits (454), Expect = 2e-42
 Identities = 133/391 (34%), Positives = 180/391 (46%), Gaps = 37/391 (9%)
 Frame = +1

Query: 292  DYRKQPPQQAGSW-QQPSGPSWEPAQPNVPSWEKKFVTTVGRIPWGRLVHAHKDLYLYKD 468
            DY  Q  Q+  S  ++P   +W   QP VPSWEKKF ++VG   W RL+   + +YLY +
Sbjct: 9    DYHHQESQKTRSLNRKPPLGNW---QPTVPSWEKKFCSSVGSFSWQRLLENKRFIYLYDN 65

Query: 469  VLQWDDSAGEEAFHNAKARYWAMINRLPCEISIPNPDMYIDEIYWNAEVDHQLYLDLEKV 648
            VLQW+DSAGEEAFHNAK R+WA IN LPC+IS+P+PD+YIDEI WN  +D ++ LDLE+ 
Sbjct: 66   VLQWNDSAGEEAFHNAKNRFWAQINGLPCDISLPDPDIYIDEIDWNCSIDPEMILDLERE 125

Query: 649  PEFSGVETKD-VNADKVVNTNNYQDQPIVPTXXXXXXXXXXXXXKNASNKNNPWTVQYGK 825
            P    V+  D V ++KV +  N                      K A   + P     G 
Sbjct: 126  P----VDPDDCVKSEKVSSLGNSLLLLNQSFSCTGWGDAEEDIGKXADIPSGP-----GL 176

Query: 826  TNTNTWDDVPWGLNSLMKPIITSEGGDGDDYPSRTSNKLSPPLDQPIVPSGWG--GDEPN 999
             + N   D PW L+           G GD              ++P+  +GWG  G+   
Sbjct: 177  WHHNQNVDNPWELSCTQNKGAVKATGWGDS-------------EEPVEATGWGDCGEPVE 223

Query: 1000 LQG-GNKKGINKDNPWESS-----CGGW--------EAVPWGSNTLT------------N 1101
              G GN     K   W +S       GW        EA  WG    T            +
Sbjct: 224  ATGWGNTNEPVKATGWGNSNEPVKATGWGDWDHQPVEATGWGDYYGTMEVPIWKDGWNNS 283

Query: 1102 KACNQFENLTNSWGSGNQRRENDNW-----RKRESDGQHMSRYKTTRFQGDYYQTSNGWR 1266
               NQ+EN  N   +   RR    W       R  +  +MSRY+++RF  + YQ   GWR
Sbjct: 284  SGWNQYENKYNDLENLKDRRAGGVWGTGNGNSRGEEVGYMSRYRSSRFHDNEYQADRGWR 343

Query: 1267 SNRGKKRVTFTHEQSPM--EPWAPQQWNSIH 1353
            S  G+KR  F  ++     +  A Q  N+IH
Sbjct: 344  SG-GRKRANFLFDEGSFLDKKAASQPRNTIH 373


>ref|XP_002530101.1| conserved hypothetical protein [Ricinus communis]
            gi|223530412|gb|EEF32300.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 291

 Score =  168 bits (425), Expect = 5e-39
 Identities = 113/346 (32%), Positives = 165/346 (47%), Gaps = 2/346 (0%)
 Frame = +1

Query: 271  SRNFKGSDYRKQPPQQAGSWQQPSGPSWEPAQPNVPSWEKKFVTTVGRIPWGRLVHAHKD 450
            ++  +G+  + + P   G+WQ           P VPSWEK+F   VG +PW +L+   K 
Sbjct: 13   NQEVQGTRSQHRKPPFHGNWQ-----------PTVPSWEKRFCYAVGLVPWRKLLETKKS 61

Query: 451  LYLYKDVLQWDDSAGEEAFHNAKARYWAMINRLPCEISIPNPDMYIDEIYWNAEVDHQLY 630
            +YLY++V+QW+DSAGEEAFHNAK R+WA IN L C+IS+P+PD+YIDEI W++ +D +LY
Sbjct: 62   MYLYENVVQWNDSAGEEAFHNAKNRFWAEINGLHCDISLPDPDIYIDEIDWSSNIDSELY 121

Query: 631  LDLEKVPEFSGVETKDVNADKVVNTNNYQDQPIVPTXXXXXXXXXXXXXKNASNKNNPWT 810
            LDLE+ P++     KD   + V+  ++  +Q    T               A +      
Sbjct: 122  LDLEREPKYPA--EKDKGEEVVIFGSSLLNQSFSCTGWGEAEEELQKAGTRALDSGYRDC 179

Query: 811  VQYGKTNTNTWDDVPWGLNSLMKPIITSEGGDGDDYPSRTSNKLSPPLDQPIVPSGWGGD 990
             Q G  N N     P+  +  M   I +E G+  + P    N                  
Sbjct: 180  GQKG-NNENPQASNPYQADGAM---INNEWGNRWNDPYEWKNSY---------------- 219

Query: 991  EPNLQGGNKKGINKDNPWESSCGGWEAVPWGSNTLTNKACNQFENLTNSWGSGNQRREND 1170
              N +GG+      +N W +  G      WG                 +W        ++
Sbjct: 220  --NERGGD------NNEW-NEVGDRTGGDWG-----------------TW--------DE 245

Query: 1171 NWRKRESDGQHMSRYKTTRFQGDYYQTSNG--WRSNRGKKRVTFTH 1302
            N RKRE  G +MSRYKT+RF  D +Q   G  WR+ RG+KR  F +
Sbjct: 246  NSRKREGAGWNMSRYKTSRFHNDEHQMDRGGWWRNGRGRKRTNFVY 291


>ref|XP_002332417.1| predicted protein [Populus trichocarpa] gi|222832370|gb|EEE70847.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  163 bits (413), Expect = 1e-37
 Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 55/382 (14%)
 Frame = +1

Query: 325  SWQQPSGPSWEP-AQPNVPSWEKKFVTTVGRIPWGRLVHAHKDLYLYKDVLQWDDSAGEE 501
            S+  P  P         +PSWEKKF + +G +PW ++V A K +Y + ++L WDDSAGEE
Sbjct: 21   SYDYPESPPHSSFVDDGIPSWEKKFCSLIGSVPWRKVVDAKKYMYCHGNILNWDDSAGEE 80

Query: 502  AFHNAKARYWAMINRLPCEISIPNPDMYIDEIYWNAEVDHQLYLDLEK---VPE------ 654
            AFHNAK R+WA IN + C IS P+P+++IDEI WNA +D ++  DLE+   VP+      
Sbjct: 81   AFHNAKKRFWAEINGVSCGISPPDPNLFIDEIKWNAYIDPEVIKDLEQDLFVPDEGDTGG 140

Query: 655  -----------FSGVETKDV--NADKVVN---TNNYQDQPIVPTXXXXXXXXXXXXXKNA 786
                       F  + +     N D V N   +NN     +                  +
Sbjct: 141  KVGRKNKKRRNFVSIPSNGCYENTDDVKNPWESNNNTQSSLSLIDKAKSWNQWDSDINKS 200

Query: 787  SNKN---NPWTVQYGKTNT----NTW---DDVPWGLNSLMKPIITSEGGDGDDYPSRTSN 936
            SN N   NPW   + + +      TW    +  WG N     +  S   + +  P + S 
Sbjct: 201  SNLNKVDNPWERGFSQESEAVKGKTWGVCGNKSWGWNHSGNHVDQSNDWNNNSNPWQHSR 260

Query: 937  KLSPPLDQPIVPSGWGGDEPNLQGGNKKGINKDNPWESSC-----------GGWEAVPWG 1083
            +   P +      GWG    + +G N+   ++   W + C           G  +   W 
Sbjct: 261  QGVDPAND----KGWGNLRDSSRGYNQ---HESRKWNNDCKSSGNGFFQGSGASKDRKWE 313

Query: 1084 SNTLTNKACNQFENLTNS--------WGSGNQRRENDNWRKRESDGQHMSRYKTTRFQGD 1239
             N   ++   Q++N   +         G G + R   +W +RE   QH++ Y++TRFQGD
Sbjct: 314  DNGSNSQGWKQWDNYGKNTKGLDFRKHGGGWETRNEGSW-QREGAHQHITGYESTRFQGD 372

Query: 1240 YYQTSNGWRSNRGKKRVTFTHE 1305
             +QT + W   R K+RV+F  E
Sbjct: 373  GFQTGHSWSGGRTKRRVSFAFE 394


>ref|XP_004136680.1| PREDICTED: uncharacterized protein LOC101209753 [Cucumis sativus]
          Length = 325

 Score =  157 bits (396), Expect = 1e-35
 Identities = 115/348 (33%), Positives = 159/348 (45%), Gaps = 3/348 (0%)
 Frame = +1

Query: 331  QQPSGPSWEPAQPNVPSWEKKFVTTVGRIPWGRLVHAHKDLYLYKDVLQWDDSAGEEAFH 510
            + P  PS +     VPSWEKKF ++VG I W +L+   K +YLY +V++W+DSAGEEAFH
Sbjct: 19   KSPRNPSPDNWHAGVPSWEKKFCSSVGLISWKKLLDTKKCMYLYDNVVKWNDSAGEEAFH 78

Query: 511  NAKARYWAMINRLPCEISIPNPDMYIDEIYWNAEVDHQLYLDLEKVPEFSGVETKDVNAD 690
            NAK+R+WA IN LPC+IS+P+PD+YIDEI WN  VD  L LDLE+       E   V A 
Sbjct: 79   NAKSRFWAEINGLPCDISLPDPDIYIDEIDWNCNVDPDLMLDLEREQIAPVREGDVVIAS 138

Query: 691  KVVNTNNYQDQPIVPTXXXXXXXXXXXXXKNASNKNNPWTVQYGKTNTNTWDDVPWGLNS 870
                   YQ      T               A   N    V  G+   N+W+        
Sbjct: 139  LYEALGLYQSY----TCVGWGEAKEDLQKPKAEPGNCDQKVDDGQ---NSWE-------- 183

Query: 871  LMKPIITSEGGDGDDYPSRTSNKLSPPLDQPIVPSGWGGDEPNLQGGNKKGINKDNPWES 1050
             M     +  G  D+Y           L+  +  + WG +  +    N+   +K++    
Sbjct: 184  -MSSATKNNVGLRDEY-----------LNNSVGWNDWGNNHTHNPSYNQNHNHKES---- 227

Query: 1051 SCGGWEAVPWGSNTLTNKACNQFE-NLTNSWGSGNQRRENDNWRKRESDGQHMSRYKTTR 1227
                        N  TN+     + N  NS G         NW        H S +K +R
Sbjct: 228  -----------DNRFTNRIWRTCDVNCKNSGG---------NW-------YHSSTFKGSR 260

Query: 1228 FQGDYYQTSNGWRSNR--GKKRVTFTHEQSPMEPWAPQQWNSIHT*RP 1365
            F  D YQ  NGWR++R  G+KRV F HE +     +P+ W + +  RP
Sbjct: 261  FHYDGYQKENGWRNSRRGGRKRVNFAHEPNN----SPECWKNSNPNRP 304


Top