BLASTX nr result

ID: Coptis21_contig00003092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003092
         (2908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...   226   3e-56
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   226   4e-56
emb|CBI40193.3| unnamed protein product [Vitis vinifera]              226   4e-56
ref|XP_002274375.1| PREDICTED: putative disease resistance prote...   225   5e-56
ref|XP_002525457.1| leucine-rich repeat containing protein, puta...   225   6e-56

>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548089|gb|EEF49581.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score =  226 bits (576), Expect = 3e-56
 Identities = 139/387 (35%), Positives = 205/387 (52%), Gaps = 7/387 (1%)
 Frame = +3

Query: 1266 RLEDGNLNGISQGTLHSSVLYESTVDPMIFKSFH-KXXXXXXXXXXYDTRTYIKQIP--Y 1436
            RLE   L  I +   H+SV  +     +I+++ H K           +T   +  +   +
Sbjct: 503  RLEGEKLQDIPENVRHTSVSVDKCKS-VIYEALHMKKGLRTMLLLCSETSREVSNVKVLH 561

Query: 1437 DLFLSLRGLHVLDLSGTQIKELPGSIGNMEALHYLDLSGTSIRSLPQSIGRLSSLQTMKL 1616
            DL  SL+ L  LD+S   IK+LPGS+G++  + YL+LS T I+ LP SI  L +LQT+ L
Sbjct: 562  DLISSLKCLRSLDMSHIAIKDLPGSVGDLMHMRYLNLSYTEIKELPDSICNLCNLQTLIL 621

Query: 1617 RDCFNFVELPKNMKNLINLRHLELDIIRQLTFMPQKMGKLTNLQTLSAFIAEKGRGFQIA 1796
              C  F+ LPK  K+L+NLRHL L     L  MP   GKLT+LQ L  F+  KG    + 
Sbjct: 622  VGCNKFLTLPKCTKDLVNLRHLNLTGCWHLKSMPPSFGKLTSLQRLHRFVVGKGVECGLN 681

Query: 1797 ELKDMIDLRGSLRIVKLENVLTVXXXXXXXVYDKQYLHRLELQWSLACTEA----REALE 1964
            ELK+M +LR +L I ++E+VL +       +  KQY+H+L L+WS +         E LE
Sbjct: 682  ELKNMNELRDTLCIDRVEDVLNIEDAKEVSLKSKQYIHKLVLRWSRSQYSQDAIDEELLE 741

Query: 1965 GLEPHKNLVELEVVCYGGRTFPTWLGDSTFSKLADINIYYCKNCNXXXXXXXXXXXXXXX 2144
             LEPH NL EL V  Y G  FP W+G+S  S L  I   +C +C                
Sbjct: 742  YLEPHTNLRELMVDVYPGTRFPKWMGNSLLSHLESIEFIHCNHCKTLPPLGQLPFLKSLT 801

Query: 2145 XXEMHALKKVDHQFCGGGRSKGFPKLEILEFDGMPILEEWTGVEENGMPCLRRLTIVDCP 2324
               M  L+ +  +F G G+ KGFP L+IL+ + M  L++W  +++   P L++L +++CP
Sbjct: 802  ISMMQELESIGREFYGEGKIKGFPSLKILKLEDMIRLKKWQEIDQGEFPVLQQLALLNCP 861

Query: 2325 NLVKLPELSNFKSLRHLEISLCFKLSL 2405
            N++ LP    F +L  L +  C +  L
Sbjct: 862  NVINLP---RFPALEDLLLDNCHETVL 885


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score =  226 bits (575), Expect = 4e-56
 Identities = 144/404 (35%), Positives = 213/404 (52%), Gaps = 7/404 (1%)
 Frame = +3

Query: 1266 RLEDGNLNGISQGTLHSSVLYESTVDPMIFKSFHKXXXXXXXXXXYD---TRTYIKQIPY 1436
            RLE+G    IS+   H++VL+ +    + F++             +    + T    + +
Sbjct: 495  RLEEGKSQSISERARHAAVLHNTFKSGVTFEALGTTTNLRTVILLHGNERSETPKAIVLH 554

Query: 1437 DLFLSLRGLHVLDLSGTQIKELPGSIGNMEALHYLDLSGTSIRSLPQSIGRLSSLQTMKL 1616
            DL  +LR L VLDLS   ++E+P  +G ++ L YL+LS T I+ LP S+  L +LQ++ L
Sbjct: 555  DLLPTLRCLRVLDLSHIAVEEIPDMVGRLKHLRYLNLSSTRIKMLPPSVCTLYNLQSLIL 614

Query: 1617 RDCFNFVELPKNMKNLINLRHLELDIIRQLTFMPQKMGKLTNLQTLSAFIAEKGRGFQIA 1796
             +C N   LP +MK L+NLRHL L     L  MP ++G+LT L+TL  F+  K +G  I 
Sbjct: 615  MNCNNLKGLPNDMKKLLNLRHLNLTGCWHLICMPPQIGELTCLRTLHRFVVAKEKGCGIG 674

Query: 1797 ELKDMIDLRGSLRIVKLENVLTVXXXXXXXVYDKQYLHRLELQWS----LACTEAREALE 1964
            ELK M +LR +L I +LE+V  V       + +KQYL RLEL+WS    +      E LE
Sbjct: 675  ELKGMTELRATLIIDRLEDVSMVSEGREANLKNKQYLRRLELKWSPGHHMPHAIGEELLE 734

Query: 1965 GLEPHKNLVELEVVCYGGRTFPTWLGDSTFSKLADINIYYCKNCNXXXXXXXXXXXXXXX 2144
             LEPH NL EL++  Y G  FP W+G S  S+L  I +  C                   
Sbjct: 735  CLEPHGNLKELKIDVYHGAKFPNWMGYSLLSRLERIELSQCTYSRILPPLGQLPLLKYLS 794

Query: 2145 XXEMHALKKVDHQFCGGGRSKGFPKLEILEFDGMPILEEWTGVEENGMPCLRRLTIVDCP 2324
               M  L+ +  +FCG G+ +GFP LE ++ + M  L+EW  +EE   P L  LTI + P
Sbjct: 795  IDTMSELESISCEFCGEGQIRGFPSLEKMKLEDMKNLKEWHEIEEGDFPRLHELTIKNSP 854

Query: 2325 NLVKLPELSNFKSLRHLEISLCFKLSLLAEKRLPASLQTLIITD 2456
            N   LP+   F SL  L +  C ++ +L   +  +SL +L I++
Sbjct: 855  NFASLPK---FPSLCDLVLDECNEM-ILGSVQFLSSLSSLKISN 894


>emb|CBI40193.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score =  226 bits (575), Expect = 4e-56
 Identities = 146/369 (39%), Positives = 197/369 (53%), Gaps = 11/369 (2%)
 Frame = +3

Query: 1401 YDTRTYIKQIPYDLFLSLRGLHVLDLSGTQIKELPGSIGNMEALHYLDLSGTSIRSLPQS 1580
            YD      ++ +DL   LR L VL LS  +I+ELP SIG+++ L YL+LS T I+ LP S
Sbjct: 248  YDFFHLTDKVSHDLLPKLRYLRVLSLSHYEIRELPNSIGDLKHLRYLNLSCTIIQELPDS 307

Query: 1581 IGRLSSLQTMKLRDCFNFVELPKNMKNLINLRHLELDIIRQLTFMPQKMGKLTNLQTLSA 1760
            +  L +LQT+ L  C     LP+  KNLINLRHL++    QL  MP +MGKL +LQTLS 
Sbjct: 308  LSDLHNLQTLVLFRCRRLNRLPRGFKNLINLRHLDIAHTHQLEVMPPQMGKLKSLQTLSK 367

Query: 1761 FIAEKGRGFQIAELKDMIDLRGSLRIVKLENVLTVXXXXXXXVYDKQYLHRLELQWSLAC 1940
            FI  K +   I EL D++ LRG L I+ L+NV+ +       + DK +L  L ++WS   
Sbjct: 368  FIVGKSKELGIKELGDLLHLRGKLSILDLQNVVDIQDARDANLKDKHHLEELLMEWSSNM 427

Query: 1941 -------TEAREALEGLEPHKNLVELEVVCYGGRTFPTWLGDSTFSKLADINIYYCKNCN 2099
                   T     L  L+P+ NL +L +  YGG TFP W+GD +FSK+  + + YC+ C 
Sbjct: 428  FDDSQNETIELNVLHFLQPNTNLKKLTIQSYGGLTFPYWIGDPSFSKMVCLELNYCRKCT 487

Query: 2100 XXXXXXXXXXXXXXXXXEMHALKKVDHQFCGGGR--SKGFPKLEILEFDGMPILEEWTGV 2273
                              M  +K V  +F G      K FP LE L F+ MP  EEW   
Sbjct: 488  LLPSLGRLSSLKKLCVKGMQGVKSVGIEFYGEPSLCVKPFPSLEFLRFEDMPEWEEWCSS 547

Query: 2274 EENGMPCLRRLTIVDCPNLV-KLPELSNFKSLRHLEISLCFKL-SLLAEKRLPASLQTLI 2447
            E    P LR L I  CP L+ KLP  S+  SL  L+I  C KL + L  + LP +L+ L 
Sbjct: 548  E--SYPRLRELEIHHCPKLIQKLP--SHLPSLVKLDIIDCPKLVAPLPNQPLPCNLEYLE 603

Query: 2448 ITDCPELKE 2474
            I  C  L++
Sbjct: 604  INKCASLEK 612


>ref|XP_002274375.1| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1427

 Score =  225 bits (574), Expect = 5e-56
 Identities = 146/374 (39%), Positives = 200/374 (53%), Gaps = 24/374 (6%)
 Frame = +3

Query: 1425 QIPYDLFLSLRGLHVLDLSGTQIKELPGSIGNMEALHYLDLSGTSIRSLPQSIGRLSSLQ 1604
            ++  +LF  L+ L VL L    + E P SI N++ L YLDLS T+I  LP+S+  L SLQ
Sbjct: 578  KVQSNLFPVLKCLRVLSLRWYNMTEFPDSISNLKHLRYLDLSHTNIVRLPESMSTLYSLQ 637

Query: 1605 TMKLRDCFNFVELPKNMKNLINLRHLELDIIRQLTFMPQKMGKLTNLQTLSAFIAEKGRG 1784
            ++ L DC++   L  NM NLI+LRHL+     +L  MP  +  LT+LQTLS+F+  +   
Sbjct: 638  SLMLIDCYHLTGLVDNMGNLIHLRHLDTRGSFKLQKMPVGIDNLTSLQTLSSFVVGENGS 697

Query: 1785 FQIAELKDMIDLRGSLRIVKLENVLTVXXXXXXXVYDKQYLHRLELQWSLACTEA----- 1949
             +I +L+DM +LRG L I+KLENV  +       + +K++LH LEL W      A     
Sbjct: 698  SRIRDLRDMSNLRGKLCILKLENVADIIDVVEANIKNKEHLHELELAWGYHENNAHSQDR 757

Query: 1950 ---REALEGLEPHKNLVELEVVCYGGRTFPTWLGDSTFSKLADINIYYCKNCNXXXXXXX 2120
                  L+ L PH N+ EL +  Y G  FP+W+GD   S LA + +  C  C        
Sbjct: 758  GFDENVLDELRPHWNIKELTIKSYDGARFPSWMGDPLLSNLARLELIGCTKCESLPSLGL 817

Query: 2121 XXXXXXXXXXEMHALKKVDHQFCGGGRS-KGFPKLEILEFDGMPILEEW-TGVEENGM-- 2288
                       MH +K++ H+F G G S + F  LE L  D M  LEEW +GVEE+G+  
Sbjct: 818  LPSLRNLVIDGMHGVKRMGHEFYGDGCSLQPFQSLETLMLDNMLELEEWSSGVEESGVRE 877

Query: 2289 -PCLRRLTIVDCPNLVKLPELSNFKSLRHLEISLCFKLSLLAEKRLPA-----------S 2432
             PCL  LTI +CPNL +L     F +L +LEI  C KL  L  KRLP+            
Sbjct: 878  FPCLHELTIWNCPNLRRLS--PRFPALTNLEIRYCEKLDSL--KRLPSVGNSVDSGELPC 933

Query: 2433 LQTLIITDCPELKE 2474
            L  L I  CP+L+E
Sbjct: 934  LHQLSILGCPKLRE 947


>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223535270|gb|EEF36947.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1177

 Score =  225 bits (573), Expect = 6e-56
 Identities = 150/405 (37%), Positives = 211/405 (52%), Gaps = 1/405 (0%)
 Frame = +3

Query: 1257 EYARLEDGNLNGISQGTLHSSVLYESTVDPMIFKSFHKXXXXXXXXXXYDTRTYIKQIPY 1436
            E + LE G+   I +GT H S++     +  I K F+K           + +  + Q+P 
Sbjct: 508  ECSVLEAGSNQIIPKGTRHLSLVCNKVTEN-IPKCFYKAKNLHTLLALTEKQEAV-QVPR 565

Query: 1437 DLFLSLRGLHVLDLSGTQIKELPGSIGNMEALHYLDLSGTSIRSLPQSIGRLSSLQTMKL 1616
             LFL  R LHVL L+ T I++LP S+G +  L  LD+S T I +LP+SI  L +LQT+ L
Sbjct: 566  SLFLKFRYLHVLILNSTCIRKLPNSLGKLIHLRLLDVSHTDIEALPKSITSLVNLQTLNL 625

Query: 1617 RDCFNFVELPKNMKNLINLRHLELDIIRQLTFMPQKMGKLTNLQTLSAFIAEKGRGFQIA 1796
              CF   ELPKN +NLI+LRH  +D    L+ MP ++G+LT+LQTLS FI  K  G ++ 
Sbjct: 626  SHCFELQELPKNTRNLISLRHTIIDHCHSLSKMPSRIGELTSLQTLSQFIVGKEYGCRLG 685

Query: 1797 ELKDMIDLRGSLRIVKLENVLTVXXXXXXXVYDKQYLHRLELQWSLACTEAREALEGLEP 1976
            ELK +++LRG L I KLENV+         + +K  L  L+L W      +   LE L+P
Sbjct: 686  ELK-LLNLRGELVIKKLENVMYRRDAKEARLQEKHNLSLLKLSWDRPHDISEIVLEALKP 744

Query: 1977 HKNLVELEVVCYGGRTFPTWLGDSTFSKLADINIYYCKNCNXXXXXXXXXXXXXXXXXEM 2156
            H+NL    +  Y G  FPTW+ D+  SKL +I +  C  C                   M
Sbjct: 745  HENLKRFHLKGYMGVKFPTWMMDAILSKLVEIKLKKCMRCEFLPPLGQLPVLKALYIRGM 804

Query: 2157 HALKKVDHQFCGGGRSKGFPKLEILEFDGMPILEEWTGVEE-NGMPCLRRLTIVDCPNLV 2333
             A+  V  +F G G   GFP LE  E   MP LEEW   +E   +  +++L +  CP L 
Sbjct: 805  DAVTYVGKEFYGNGVINGFPLLEHFEIHAMPNLEEWLNFDEGQALTRVKKLVVKGCPKLR 864

Query: 2334 KLPELSNFKSLRHLEISLCFKLSLLAEKRLPASLQTLIITDCPEL 2468
             +P   N  SL  LE+S   ++ L     L  SL TL I++  E+
Sbjct: 865  NMPR--NLSSLEELELSDSNEMLLRVLPSL-TSLATLRISEFSEV 906


Top