BLASTX nr result
ID: Coptis21_contig00003082
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003082 (409 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI16283.3| unnamed protein product [Vitis vinifera] 207 9e-52 ref|XP_002284994.1| PREDICTED: general transcription factor IIH ... 207 9e-52 ref|XP_003624959.1| General transcription factor IIH subunit [Me... 202 2e-50 ref|NP_001142175.1| uncharacterized protein LOC100274342 [Zea ma... 199 2e-49 ref|XP_004143721.1| PREDICTED: general transcription factor IIH ... 198 4e-49 >emb|CBI16283.3| unnamed protein product [Vitis vinifera] Length = 494 Score = 207 bits (526), Expect = 9e-52 Identities = 98/136 (72%), Positives = 112/136 (82%) Frame = +1 Query: 1 EEGNENDMEAWERAYADERSWESLQEDESGLLRPIDTDSLHHAQYXXXXXXXXXXXXXXX 180 +EGN ++AWERAYADERSWESLQEDESGLLRPID +++HAQY Sbjct: 90 DEGNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTAR 149 Query: 181 IQKGLIRYLYIVIDFSRAAAEMDFRPSRMVVVAKHVEAFIREFFDQNPLSHVGLVSIKDG 360 IQKGLIRYLYIV+D SRAA+EMDF+PSRM VVAKH+EAFIREFFDQNPLS +GLV+IKDG Sbjct: 150 IQKGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDG 209 Query: 361 VAHCLTDLGGSPDSHI 408 +A CLTDLGGSPDSH+ Sbjct: 210 LAQCLTDLGGSPDSHV 225 >ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis vinifera] Length = 433 Score = 207 bits (526), Expect = 9e-52 Identities = 98/136 (72%), Positives = 112/136 (82%) Frame = +1 Query: 1 EEGNENDMEAWERAYADERSWESLQEDESGLLRPIDTDSLHHAQYXXXXXXXXXXXXXXX 180 +EGN ++AWERAYADERSWESLQEDESGLLRPID +++HAQY Sbjct: 29 DEGNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTAR 88 Query: 181 IQKGLIRYLYIVIDFSRAAAEMDFRPSRMVVVAKHVEAFIREFFDQNPLSHVGLVSIKDG 360 IQKGLIRYLYIV+D SRAA+EMDF+PSRM VVAKH+EAFIREFFDQNPLS +GLV+IKDG Sbjct: 89 IQKGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDG 148 Query: 361 VAHCLTDLGGSPDSHI 408 +A CLTDLGGSPDSH+ Sbjct: 149 LAQCLTDLGGSPDSHV 164 >ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula] gi|355499974|gb|AES81177.1| General transcription factor IIH subunit [Medicago truncatula] Length = 426 Score = 202 bits (514), Expect = 2e-50 Identities = 96/136 (70%), Positives = 111/136 (81%) Frame = +1 Query: 1 EEGNENDMEAWERAYADERSWESLQEDESGLLRPIDTDSLHHAQYXXXXXXXXXXXXXXX 180 +E N++ +EAWERAY ++RSWESLQEDESGLLRPIDT ++HHAQY Sbjct: 19 DEANDDGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALASNAATAR 78 Query: 181 IQKGLIRYLYIVIDFSRAAAEMDFRPSRMVVVAKHVEAFIREFFDQNPLSHVGLVSIKDG 360 IQKGLIRYLYIV+D S+AA+E DFRPSRM V+AK VE FIREFFDQNPLSHVGLV+ KDG Sbjct: 79 IQKGLIRYLYIVVDLSKAASERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDG 138 Query: 361 VAHCLTDLGGSPDSHI 408 VA+CLTDLGGSP+SHI Sbjct: 139 VANCLTDLGGSPESHI 154 >ref|NP_001142175.1| uncharacterized protein LOC100274342 [Zea mays] gi|194707472|gb|ACF87820.1| unknown [Zea mays] gi|414586431|tpg|DAA37002.1| TPA: hypothetical protein ZEAMMB73_625811 [Zea mays] Length = 428 Score = 199 bits (506), Expect = 2e-49 Identities = 99/136 (72%), Positives = 109/136 (80%) Frame = +1 Query: 1 EEGNENDMEAWERAYADERSWESLQEDESGLLRPIDTDSLHHAQYXXXXXXXXXXXXXXX 180 E G +EAWERAYADERSWESLQEDESGLLRP+DT +L HAQY Sbjct: 31 EGGEGRVLEAWERAYADERSWESLQEDESGLLRPVDTKTLVHAQYRRRLLLRSAAAAAAR 90 Query: 181 IQKGLIRYLYIVIDFSRAAAEMDFRPSRMVVVAKHVEAFIREFFDQNPLSHVGLVSIKDG 360 IQKGLIRYLYIVID SRAA+EMD+RPSRM VVAKH EAFIREFFDQNPLSHVGLV+IKDG Sbjct: 91 IQKGLIRYLYIVIDLSRAASEMDYRPSRMAVVAKHAEAFIREFFDQNPLSHVGLVTIKDG 150 Query: 361 VAHCLTDLGGSPDSHI 408 +AH LT++GGSP+S I Sbjct: 151 IAHRLTEIGGSPESQI 166 >ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis sativus] Length = 423 Score = 198 bits (503), Expect = 4e-49 Identities = 93/136 (68%), Positives = 110/136 (80%) Frame = +1 Query: 1 EEGNENDMEAWERAYADERSWESLQEDESGLLRPIDTDSLHHAQYXXXXXXXXXXXXXXX 180 ++ + N + AWER YAD+RSWE+LQEDESGLLRPID +++HAQY Sbjct: 18 DDDDANGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTAR 77 Query: 181 IQKGLIRYLYIVIDFSRAAAEMDFRPSRMVVVAKHVEAFIREFFDQNPLSHVGLVSIKDG 360 IQKGLIRYLYIVIDFS+AA EMDFRPSRM VVAKHV+AF+REFFDQNPLS +GLV+IKDG Sbjct: 78 IQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAFVREFFDQNPLSQIGLVTIKDG 137 Query: 361 VAHCLTDLGGSPDSHI 408 A+CLTDLGGSP+SH+ Sbjct: 138 FANCLTDLGGSPESHV 153