BLASTX nr result

ID: Coptis21_contig00003078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003078
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277175.1| PREDICTED: coatomer subunit zeta-2 [Vitis vi...   154   9e-36
ref|NP_001233898.1| nonclathrin coat protein zeta1-COP [Solanum ...   154   9e-36
ref|NP_001233904.1| nonclathrin coat protein zeta2-COP [Solanum ...   152   4e-35
emb|CBI30821.3| unnamed protein product [Vitis vinifera]              147   9e-34
ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isof...   147   9e-34

>ref|XP_002277175.1| PREDICTED: coatomer subunit zeta-2 [Vitis vinifera]
           gi|297743043|emb|CBI35910.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/106 (72%), Positives = 85/106 (80%)
 Frame = +1

Query: 1   PTLSSKLAFEKSVFTKTQKTNARTEAEISMFENNIIVYKFIQDLHFFVIGSDDENELILG 180
           PT ++KLAFEKSVFTKTQKTNARTEAEI+MFENN+++YKFIQDLHFFV G DDENELIL 
Sbjct: 36  PTNAAKLAFEKSVFTKTQKTNARTEAEIAMFENNVVIYKFIQDLHFFVTGGDDENELILA 95

Query: 181 NVLQGFYDAVALLLRGNVDKREAXXXXXXXXXXXXXXVDGGMVLET 318
            VLQGF DAVALLLR N+DKREA              VDGGM+LET
Sbjct: 96  TVLQGFSDAVALLLRNNIDKREALENLDLILLCLDEIVDGGMILET 141


>ref|NP_001233898.1| nonclathrin coat protein zeta1-COP [Solanum lycopersicum]
           gi|7259352|dbj|BAA92781.1| nonclathrin coat protein
           zeta1-COP [Solanum lycopersicum]
          Length = 184

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/106 (72%), Positives = 85/106 (80%)
 Frame = +1

Query: 1   PTLSSKLAFEKSVFTKTQKTNARTEAEISMFENNIIVYKFIQDLHFFVIGSDDENELILG 180
           PT ++K+AFEKS+FTKTQKTNARTEAEI+MFENNIIVYKF+QDLHFFV G DDENEL+L 
Sbjct: 37  PTNNAKVAFEKSIFTKTQKTNARTEAEITMFENNIIVYKFVQDLHFFVTGGDDENELVLA 96

Query: 181 NVLQGFYDAVALLLRGNVDKREAXXXXXXXXXXXXXXVDGGMVLET 318
            VLQGFYDAV LLLR NVD+REA              VDGGMVLET
Sbjct: 97  TVLQGFYDAVTLLLRNNVDQREALENLDLILLCLDEIVDGGMVLET 142


>ref|NP_001233904.1| nonclathrin coat protein zeta2-COP [Solanum lycopersicum]
           gi|7259354|dbj|BAA92782.1| nonclathrin coat protein
           zeta2-COP [Solanum lycopersicum]
          Length = 183

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/106 (70%), Positives = 85/106 (80%)
 Frame = +1

Query: 1   PTLSSKLAFEKSVFTKTQKTNARTEAEISMFENNIIVYKFIQDLHFFVIGSDDENELILG 180
           PT S+KLAFEKS+FTKTQKTNARTEAEI+MF++NI+VYKF+QDLHFFV G DDENELIL 
Sbjct: 36  PTYSAKLAFEKSIFTKTQKTNARTEAEIAMFDSNIVVYKFVQDLHFFVTGGDDENELILA 95

Query: 181 NVLQGFYDAVALLLRGNVDKREAXXXXXXXXXXXXXXVDGGMVLET 318
            VLQGFYDAV LLLR NV++REA              VDGGM+LET
Sbjct: 96  TVLQGFYDAVTLLLRSNVEQREALENLDLILLCLDEIVDGGMILET 141


>emb|CBI30821.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/106 (68%), Positives = 84/106 (79%)
 Frame = +1

Query: 1   PTLSSKLAFEKSVFTKTQKTNARTEAEISMFENNIIVYKFIQDLHFFVIGSDDENELILG 180
           PT ++K  FEKSVF+KTQKTNARTEAEI+MFENNI+VYKF+QDLHFFV G +DENELIL 
Sbjct: 53  PTNNAKETFEKSVFSKTQKTNARTEAEIAMFENNIVVYKFVQDLHFFVTGGEDENELILA 112

Query: 181 NVLQGFYDAVALLLRGNVDKREAXXXXXXXXXXXXXXVDGGMVLET 318
            VLQGF+DAV LLLRGNVDK+EA              +DGG+VLET
Sbjct: 113 TVLQGFFDAVGLLLRGNVDKKEALENLDLILLCLDEIIDGGIVLET 158


>ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isoform 1 [Vitis vinifera]
          Length = 177

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/106 (68%), Positives = 84/106 (79%)
 Frame = +1

Query: 1   PTLSSKLAFEKSVFTKTQKTNARTEAEISMFENNIIVYKFIQDLHFFVIGSDDENELILG 180
           PT ++K  FEKSVF+KTQKTNARTEAEI+MFENNI+VYKF+QDLHFFV G +DENELIL 
Sbjct: 30  PTNNAKETFEKSVFSKTQKTNARTEAEIAMFENNIVVYKFVQDLHFFVTGGEDENELILA 89

Query: 181 NVLQGFYDAVALLLRGNVDKREAXXXXXXXXXXXXXXVDGGMVLET 318
            VLQGF+DAV LLLRGNVDK+EA              +DGG+VLET
Sbjct: 90  TVLQGFFDAVGLLLRGNVDKKEALENLDLILLCLDEIIDGGIVLET 135


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