BLASTX nr result

ID: Coptis21_contig00003077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003077
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277175.1| PREDICTED: coatomer subunit zeta-2 [Vitis vi...   272   9e-71
ref|NP_001233898.1| nonclathrin coat protein zeta1-COP [Solanum ...   270   3e-70
ref|NP_001233904.1| nonclathrin coat protein zeta2-COP [Solanum ...   267   3e-69
emb|CBI30821.3| unnamed protein product [Vitis vinifera]              266   6e-69
ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isof...   265   1e-68

>ref|XP_002277175.1| PREDICTED: coatomer subunit zeta-2 [Vitis vinifera]
           gi|297743043|emb|CBI35910.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  272 bits (695), Expect = 9e-71
 Identities = 140/185 (75%), Positives = 158/185 (85%)
 Frame = +2

Query: 44  MSSFSAYQGSCPFIKSILLLDSEGKRVAIKYYSEDDWPTLNNKLAFEKSVFTKTQKTNAR 223
           M++FS + G+CP IK+ILLLDSEGKRVA+KYYS DDWPT   KLAFEKSVFTKTQKTNAR
Sbjct: 1   MANFSTH-GACPSIKNILLLDSEGKRVAVKYYS-DDWPTNAAKLAFEKSVFTKTQKTNAR 58

Query: 224 TEAEITMFENNIIVYKFIQDLHFFVIGGDDENELILSTVLQGFYDAVALLLRGNVDKREA 403
           TEAEI MFENN+++YKFIQDLHFFV GGDDENELIL+TVLQGF DAVALLLR N+DKREA
Sbjct: 59  TEAEIAMFENNVVIYKFIQDLHFFVTGGDDENELILATVLQGFSDAVALLLRNNIDKREA 118

Query: 404 XXXXXXXXXXXXXXVDGGMVLETDASIIAGKVASHSVDSTAPLSEQTISQALATAREHLT 583
                         VDGGM+LETDAS+I GKVA+HS+D+ APLSEQT++QALATAREHLT
Sbjct: 119 LENLDLILLCLDEIVDGGMILETDASVIEGKVAAHSIDAGAPLSEQTLTQALATAREHLT 178

Query: 584 RSLLK 598
           RSLLK
Sbjct: 179 RSLLK 183


>ref|NP_001233898.1| nonclathrin coat protein zeta1-COP [Solanum lycopersicum]
           gi|7259352|dbj|BAA92781.1| nonclathrin coat protein
           zeta1-COP [Solanum lycopersicum]
          Length = 184

 Score =  270 bits (690), Expect = 3e-70
 Identities = 138/185 (74%), Positives = 154/185 (83%)
 Frame = +2

Query: 44  MSSFSAYQGSCPFIKSILLLDSEGKRVAIKYYSEDDWPTLNNKLAFEKSVFTKTQKTNAR 223
           M+ F     SCP +K+ILLLDSEGKRVA+KYYS DDWPT N K+AFEKS+FTKTQKTNAR
Sbjct: 1   MAGFLLNYDSCPVVKNILLLDSEGKRVAVKYYS-DDWPTNNAKVAFEKSIFTKTQKTNAR 59

Query: 224 TEAEITMFENNIIVYKFIQDLHFFVIGGDDENELILSTVLQGFYDAVALLLRGNVDKREA 403
           TEAEITMFENNIIVYKF+QDLHFFV GGDDENEL+L+TVLQGFYDAV LLLR NVD+REA
Sbjct: 60  TEAEITMFENNIIVYKFVQDLHFFVTGGDDENELVLATVLQGFYDAVTLLLRNNVDQREA 119

Query: 404 XXXXXXXXXXXXXXVDGGMVLETDASIIAGKVASHSVDSTAPLSEQTISQALATAREHLT 583
                         VDGGMVLETD + IAGKV+SH++D  APLSEQTI+QALATAREHLT
Sbjct: 120 LENLDLILLCLDEIVDGGMVLETDGNTIAGKVSSHNMDDGAPLSEQTITQALATAREHLT 179

Query: 584 RSLLK 598
           RSLL+
Sbjct: 180 RSLLR 184


>ref|NP_001233904.1| nonclathrin coat protein zeta2-COP [Solanum lycopersicum]
           gi|7259354|dbj|BAA92782.1| nonclathrin coat protein
           zeta2-COP [Solanum lycopersicum]
          Length = 183

 Score =  267 bits (682), Expect = 3e-69
 Identities = 133/183 (72%), Positives = 154/183 (84%)
 Frame = +2

Query: 50  SFSAYQGSCPFIKSILLLDSEGKRVAIKYYSEDDWPTLNNKLAFEKSVFTKTQKTNARTE 229
           +F  + GSCP +K+ILLLDSEGKRVA+KYY  DDWPT + KLAFEKS+FTKTQKTNARTE
Sbjct: 2   AFPLHYGSCPVVKNILLLDSEGKRVAVKYYC-DDWPTYSAKLAFEKSIFTKTQKTNARTE 60

Query: 230 AEITMFENNIIVYKFIQDLHFFVIGGDDENELILSTVLQGFYDAVALLLRGNVDKREAXX 409
           AEI MF++NI+VYKF+QDLHFFV GGDDENELIL+TVLQGFYDAV LLLR NV++REA  
Sbjct: 61  AEIAMFDSNIVVYKFVQDLHFFVTGGDDENELILATVLQGFYDAVTLLLRSNVEQREALE 120

Query: 410 XXXXXXXXXXXXVDGGMVLETDASIIAGKVASHSVDSTAPLSEQTISQALATAREHLTRS 589
                       VDGGM+LETD S+IAGKVASH++D  +P+SEQTISQALATAREHLTRS
Sbjct: 121 NLDLILLCLDEIVDGGMILETDGSVIAGKVASHNMDDGSPISEQTISQALATAREHLTRS 180

Query: 590 LLK 598
           LL+
Sbjct: 181 LLR 183


>emb|CBI30821.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  266 bits (679), Expect = 6e-69
 Identities = 137/188 (72%), Positives = 154/188 (81%)
 Frame = +2

Query: 35  RINMSSFSAYQGSCPFIKSILLLDSEGKRVAIKYYSEDDWPTLNNKLAFEKSVFTKTQKT 214
           R N  +  +   SCP +K+ILLLDSEGKRVA+KYY  DDWPT N K  FEKSVF+KTQKT
Sbjct: 14  RTNFPAKPSNMESCPSVKNILLLDSEGKRVAVKYYC-DDWPTNNAKETFEKSVFSKTQKT 72

Query: 215 NARTEAEITMFENNIIVYKFIQDLHFFVIGGDDENELILSTVLQGFYDAVALLLRGNVDK 394
           NARTEAEI MFENNI+VYKF+QDLHFFV GG+DENELIL+TVLQGF+DAV LLLRGNVDK
Sbjct: 73  NARTEAEIAMFENNIVVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDK 132

Query: 395 REAXXXXXXXXXXXXXXVDGGMVLETDASIIAGKVASHSVDSTAPLSEQTISQALATARE 574
           +EA              +DGG+VLETDA++IAGKVASHS+DS APLSEQTISQALATARE
Sbjct: 133 KEALENLDLILLCLDEIIDGGIVLETDANVIAGKVASHSLDSGAPLSEQTISQALATARE 192

Query: 575 HLTRSLLK 598
           HL RSLLK
Sbjct: 193 HLARSLLK 200


>ref|XP_002273766.1| PREDICTED: coatomer subunit zeta-1-like isoform 1 [Vitis vinifera]
          Length = 177

 Score =  265 bits (676), Expect = 1e-68
 Identities = 135/176 (76%), Positives = 150/176 (85%)
 Frame = +2

Query: 71  SCPFIKSILLLDSEGKRVAIKYYSEDDWPTLNNKLAFEKSVFTKTQKTNARTEAEITMFE 250
           SCP +K+ILLLDSEGKRVA+KYY  DDWPT N K  FEKSVF+KTQKTNARTEAEI MFE
Sbjct: 3   SCPSVKNILLLDSEGKRVAVKYYC-DDWPTNNAKETFEKSVFSKTQKTNARTEAEIAMFE 61

Query: 251 NNIIVYKFIQDLHFFVIGGDDENELILSTVLQGFYDAVALLLRGNVDKREAXXXXXXXXX 430
           NNI+VYKF+QDLHFFV GG+DENELIL+TVLQGF+DAV LLLRGNVDK+EA         
Sbjct: 62  NNIVVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEALENLDLILL 121

Query: 431 XXXXXVDGGMVLETDASIIAGKVASHSVDSTAPLSEQTISQALATAREHLTRSLLK 598
                +DGG+VLETDA++IAGKVASHS+DS APLSEQTISQALATAREHL RSLLK
Sbjct: 122 CLDEIIDGGIVLETDANVIAGKVASHSLDSGAPLSEQTISQALATAREHLARSLLK 177


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