BLASTX nr result

ID: Coptis21_contig00003074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003074
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU16688.1| unknown [Glycine max]                                   77   1e-12
ref|XP_004138041.1| PREDICTED: uncharacterized protein LOC101212...    62   4e-08
ref|XP_002514896.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|NP_190435.1| uncharacterized protein [Arabidopsis thaliana] ...    60   2e-07
ref|XP_003525413.1| PREDICTED: uncharacterized protein LOC100805...    59   3e-07

>gb|ACU16688.1| unknown [Glycine max]
          Length = 70

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/65 (53%), Positives = 46/65 (70%)
 Frame = +3

Query: 225 VNTYGNKKDSNKPKENDTVNYNRRHTCLHVTKLHHPSFPGKLKQ*SWL*QHKQHHCYYHW 404
           ++T  NKKD N+ KE+D V+ +R  T LHV KL+H + P +LKQ +   QHKQHHCY+HW
Sbjct: 1   MHTNSNKKDGNETKEDDCVDQDRNCTGLHVPKLYHSAPPRQLKQKTRAKQHKQHHCYHHW 60

Query: 405 PPICH 419
            PI H
Sbjct: 61  TPIRH 65


>ref|XP_004138041.1| PREDICTED: uncharacterized protein LOC101212373 [Cucumis sativus]
           gi|449520509|ref|XP_004167276.1| PREDICTED:
           uncharacterized LOC101212373 [Cucumis sativus]
          Length = 69

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/69 (52%), Positives = 37/69 (53%)
 Frame = -1

Query: 419 MADWGPVIIAVXXXXXXXXXXXXXXXGKGRVVEFGNMQTSVASIVVHCXXXXXXXXXXXX 240
           MADWGPVIIAV                KGRVVEFGNMQTS ASI+VH             
Sbjct: 1   MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60

Query: 239 XXGVHIYTG 213
             GVHIYTG
Sbjct: 61  AIGVHIYTG 69


>ref|XP_002514896.1| conserved hypothetical protein [Ricinus communis]
           gi|223545947|gb|EEF47450.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/69 (50%), Positives = 37/69 (53%)
 Frame = -1

Query: 419 MADWGPVIIAVXXXXXXXXXXXXXXXGKGRVVEFGNMQTSVASIVVHCXXXXXXXXXXXX 240
           MADWGPV+IAV               GKGRVVEFGNMQTS  SI+VH             
Sbjct: 1   MADWGPVVIAVVLFVLLSPGLLFQLPGKGRVVEFGNMQTSGLSILVHTIIFFALVTIFLI 60

Query: 239 XXGVHIYTG 213
             GVHIYTG
Sbjct: 61  AIGVHIYTG 69


>ref|NP_190435.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6523097|emb|CAB62355.1| putative protein [Arabidopsis
           thaliana] gi|332644920|gb|AEE78441.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 89

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/72 (44%), Positives = 38/72 (52%)
 Frame = -1

Query: 419 MADWGPVIIAVXXXXXXXXXXXXXXXGKGRVVEFGNMQTSVASIVVHCXXXXXXXXXXXX 240
           MADWGPV++AV                +GRVVEFGNMQTS ASI+VH             
Sbjct: 1   MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 239 XXGVHIYTG*RK 204
              +HIYTG R+
Sbjct: 61  AIRLHIYTGTRQ 72


>ref|XP_003525413.1| PREDICTED: uncharacterized protein LOC100805083 [Glycine max]
          Length = 103

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/69 (47%), Positives = 36/69 (52%)
 Frame = -1

Query: 419 MADWGPVIIAVXXXXXXXXXXXXXXXGKGRVVEFGNMQTSVASIVVHCXXXXXXXXXXXX 240
           MADWGPV+IAV                +GRV EFGNMQTS ASI+VH             
Sbjct: 35  MADWGPVVIAVVLFVLLSPGLLFQMPARGRVAEFGNMQTSGASILVHAIIYFGLITIFLI 94

Query: 239 XXGVHIYTG 213
             GVHIYTG
Sbjct: 95  AIGVHIYTG 103


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