BLASTX nr result

ID: Coptis21_contig00003069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003069
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553369.1| PREDICTED: ubiquitin-conjugating enzyme E2 2...   323   6e-86
ref|XP_002278601.2| PREDICTED: ubiquitin-conjugating enzyme E2 2...   318   1e-84
emb|CBI32855.3| unnamed protein product [Vitis vinifera]              318   1e-84
gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]     311   2e-82
ref|XP_002523681.1| ubiquitin-conjugating enzyme e2S, putative [...   311   2e-82

>ref|XP_003553369.1| PREDICTED: ubiquitin-conjugating enzyme E2 22-like [Glycine max]
          Length = 384

 Score =  323 bits (828), Expect = 6e-86
 Identities = 178/281 (63%), Positives = 198/281 (70%), Gaps = 1/281 (0%)
 Frame = -3

Query: 1073 KSPFLLSAIGLSFVFLV*RTLTFYMATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNE 894
            + PFL SA  ++  F++       MATNENLPPNVIKQLAKELKNLDE PPEG+KVVVN+
Sbjct: 109  EGPFLFSAKQIAGAFVL-------MATNENLPPNVIKQLAKELKNLDESPPEGIKVVVND 161

Query: 893  DDLSTIFADIEGPAGTPYENGTFRMKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVN 714
            DD STIFADIEGPAGTPYENG FRMKL LS DFP+SPPKG+FLT+IFHPNIATNGEICVN
Sbjct: 162  DDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGFFLTKIFHPNIATNGEICVN 221

Query: 713  TLKRDWNPSXXXXXXXXXXXXXLIEPFPESALNEQAGKMLLENYEEYARHARLYTGIHAL 534
            TLK+DWNPS             LIEPFPESALNEQAGKMLLENYEEYARHARLYTGIHA 
Sbjct: 222  TLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARLYTGIHA- 280

Query: 533  KSKPKFKTGAISES-TALNIDSTKNVSQKAGDTKTXXXXXXXXXXXXXXXXXXPNKGGPS 357
            K KPKFK+GAISES TALN+D T N S  +GD KT                   N    +
Sbjct: 281  KPKPKFKSGAISESTTALNVDQT-NTSVISGDIKTTPASAALPVPVLATTTTRGN----N 335

Query: 356  AHDQSAVGGLTTEPAVAGSIPLQKAVGGATKVQADKKKIDA 234
                +AV G +    ++ +    K  GG  K QADKKKIDA
Sbjct: 336  QEQAAAVNGSSAATVISAASAPPKKEGGQAKAQADKKKIDA 376


>ref|XP_002278601.2| PREDICTED: ubiquitin-conjugating enzyme E2 22-like [Vitis vinifera]
          Length = 259

 Score =  318 bits (816), Expect = 1e-84
 Identities = 175/263 (66%), Positives = 186/263 (70%), Gaps = 7/263 (2%)
 Frame = -3

Query: 1001 MATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNEDDLSTIFADIEGPAGTPYENGTFR 822
            MATNENLPPNVIKQLAKELKNLDE PPEG+KVVVN+DD STIFAD+EGPAGTPYENG FR
Sbjct: 1    MATNENLPPNVIKQLAKELKNLDETPPEGIKVVVNDDDFSTIFADVEGPAGTPYENGVFR 60

Query: 821  MKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVNTLKRDWNPSXXXXXXXXXXXXXLI 642
            MKL LS DFP+SPPKGYFLT+IFHPNIATNGEICVNTLK+DWNPS             LI
Sbjct: 61   MKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLI 120

Query: 641  EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKSKPKFKTGAISES-TALNIDSTK 465
            EPFPESALNEQAGKMLLENYEEYARHAR+YTGIHALK KPKFKTGAISES TALN+D T 
Sbjct: 121  EPFPESALNEQAGKMLLENYEEYARHARIYTGIHALKPKPKFKTGAISESTTALNVDQTN 180

Query: 464  ----NVSQKAGDTKTXXXXXXXXXXXXXXXXXXPNKGGPSAHDQSAVGGLTTEPAVAGSI 297
                NV QK                          KGG +          TTE  V+GS 
Sbjct: 181  SSVLNVEQK------NTALQLPPSSLATCMTAGGGKGGGNGQ------APTTETGVSGSA 228

Query: 296  PL--QKAVGGATKVQADKKKIDA 234
                 K   G  KVQADKKK+DA
Sbjct: 229  AATPHKKESGLAKVQADKKKMDA 251


>emb|CBI32855.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  318 bits (816), Expect = 1e-84
 Identities = 175/263 (66%), Positives = 186/263 (70%), Gaps = 7/263 (2%)
 Frame = -3

Query: 1001 MATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNEDDLSTIFADIEGPAGTPYENGTFR 822
            MATNENLPPNVIKQLAKELKNLDE PPEG+KVVVN+DD STIFAD+EGPAGTPYENG FR
Sbjct: 53   MATNENLPPNVIKQLAKELKNLDETPPEGIKVVVNDDDFSTIFADVEGPAGTPYENGVFR 112

Query: 821  MKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVNTLKRDWNPSXXXXXXXXXXXXXLI 642
            MKL LS DFP+SPPKGYFLT+IFHPNIATNGEICVNTLK+DWNPS             LI
Sbjct: 113  MKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLI 172

Query: 641  EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKSKPKFKTGAISES-TALNIDSTK 465
            EPFPESALNEQAGKMLLENYEEYARHAR+YTGIHALK KPKFKTGAISES TALN+D T 
Sbjct: 173  EPFPESALNEQAGKMLLENYEEYARHARIYTGIHALKPKPKFKTGAISESTTALNVDQTN 232

Query: 464  ----NVSQKAGDTKTXXXXXXXXXXXXXXXXXXPNKGGPSAHDQSAVGGLTTEPAVAGSI 297
                NV QK                          KGG +          TTE  V+GS 
Sbjct: 233  SSVLNVEQK------NTALQLPPSSLATCMTAGGGKGGGNGQ------APTTETGVSGSA 280

Query: 296  PL--QKAVGGATKVQADKKKIDA 234
                 K   G  KVQADKKK+DA
Sbjct: 281  AATPHKKESGLAKVQADKKKMDA 303


>gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]
          Length = 270

 Score =  311 bits (798), Expect = 2e-82
 Identities = 170/263 (64%), Positives = 186/263 (70%), Gaps = 7/263 (2%)
 Frame = -3

Query: 1001 MATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNEDDLSTIFADIEGPAGTPYENGTFR 822
            MATNENLPPNVIKQLAKELKNLDE PPEG+KV VN+DD S I+ADIEGPAGTPYENG FR
Sbjct: 1    MATNENLPPNVIKQLAKELKNLDETPPEGIKVGVNDDDFSIIYADIEGPAGTPYENGVFR 60

Query: 821  MKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVNTLKRDWNPSXXXXXXXXXXXXXLI 642
            MKL LS DFP+SPPKGYFLT+IFHPNIATNGEICVNTLK+DWNPS             LI
Sbjct: 61   MKLILSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLI 120

Query: 641  EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKSKPKFKTGAISES-TALNIDSTK 465
            EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALK KPKFK+GAISES TALN+D + 
Sbjct: 121  EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKQKPKFKSGAISESTTALNVDQS- 179

Query: 464  NVSQKAGDTKTXXXXXXXXXXXXXXXXXXPNKGG------PSAHDQSAVGGLTTEPAVAG 303
            N S    D K                     KGG       SA + +   G++++   A 
Sbjct: 180  NTSVLNVDEKKASSGAALPLPSPLASTTTFTKGGNGQDQPASALNSTTETGVSSDSVAAP 239

Query: 302  SIPLQKAVGGATKVQADKKKIDA 234
                QK      KVQADKKK+DA
Sbjct: 240  PPVTQKKEVTLAKVQADKKKMDA 262


>ref|XP_002523681.1| ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
            gi|223537081|gb|EEF38716.1| ubiquitin-conjugating enzyme
            e2S, putative [Ricinus communis]
          Length = 269

 Score =  311 bits (798), Expect = 2e-82
 Identities = 170/264 (64%), Positives = 187/264 (70%), Gaps = 8/264 (3%)
 Frame = -3

Query: 1001 MATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNEDDLSTIFADIEGPAGTPYENGTFR 822
            MATNENLPPNV+KQLAKELKNLDE PPEG+KV VN+DD STI+ADIEGPAGTPYENG FR
Sbjct: 1    MATNENLPPNVVKQLAKELKNLDESPPEGIKVGVNDDDFSTIYADIEGPAGTPYENGLFR 60

Query: 821  MKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVNTLKRDWNPSXXXXXXXXXXXXXLI 642
            MKL LS+DFP SPPKGYFLT+IFHPNIATNGEICVNTLK+DWNPS             LI
Sbjct: 61   MKLLLSRDFPYSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLI 120

Query: 641  EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKSKPKFKTGAISES-TALNIDSTK 465
            EPFPESALNEQAGKMLLENY+EYARHARLYT IHA K KPKFK+GAISES TALN+D + 
Sbjct: 121  EPFPESALNEQAGKMLLENYDEYARHARLYTAIHA-KPKPKFKSGAISESTTALNVDQS- 178

Query: 464  NVSQKAGDTKTXXXXXXXXXXXXXXXXXXPNKGGPSAHDQSAVGGLTTEPAVAGSIPL-- 291
            N S    D K                     KGG ++ +QSA      E  V GS+ +  
Sbjct: 179  NTSVLNSDQKNTAVNAAIALPSPLSPCSVATKGG-NSQEQSAAVAPVPETGVGGSVAVAT 237

Query: 290  -----QKAVGGATKVQADKKKIDA 234
                 QK   G  K QADKKK+DA
Sbjct: 238  PTVATQKKEAGPAKAQADKKKLDA 261


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