BLASTX nr result

ID: Coptis21_contig00003066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003066
         (2275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261...   223   2e-55
emb|CBI24989.3| unnamed protein product [Vitis vinifera]              212   4e-52
emb|CAN70065.1| hypothetical protein VITISV_015730 [Vitis vinifera]   212   4e-52
ref|XP_002310979.1| predicted protein [Populus trichocarpa] gi|2...   176   3e-41
ref|XP_002315412.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-40

>ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261025 [Vitis vinifera]
          Length = 1285

 Score =  223 bits (568), Expect = 2e-55
 Identities = 193/558 (34%), Positives = 269/558 (48%), Gaps = 56/558 (10%)
 Frame = +2

Query: 110  GEQQIVPVQENE------LKKMNSSF--LEENVSSPVELAKAYMG-RSSKVTPSTLGLHN 262
            GE    PVQENE      L+ +++    LEE+V+SP ELAKAYMG R SKV+PS L L  
Sbjct: 181  GEISNNPVQENETESHRFLEAVSTPIRVLEEDVASPAELAKAYMGSRPSKVSPSMLSLRG 240

Query: 263  QASRGDVSRGTTIPFSPMSHSRSLVP---APVHNACVSKVYDSGYLTPVPRGRSAVYSMA 433
            QA R D +  + I   P     S+VP   APV       V ++G++ P  RGRSA+YSMA
Sbjct: 241  QAFREDSTLPSNISLHPKLPIMSIVPKSPAPVG------VSENGFMIPRSRGRSALYSMA 294

Query: 434  RTPSSRFHQTASLKGVQSMTEGNAGPSTSSRRSWEDNLLNGAKQA-SKRRISVLDSDIGS 610
            RTP SR + T ++KGV S  +   GPS+S   S E N  +G+KQ   KRR SVLDSDIGS
Sbjct: 295  RTPYSRVNPTTTIKGVTSTLDVYGGPSSSQSAS-EQNRFSGSKQGLLKRRSSVLDSDIGS 353

Query: 611  VDSIRRTRRKTNVMSPSDNLGLSIHRSSLPIPSALIGTDATKGHLSSVQNQLRLDGHKHN 790
            V  IRR R+K N++SP  +LG ++  S L      + +D  +  LS ++   RL G   +
Sbjct: 354  VGPIRRIRQKPNLLSPK-SLGTAVGGSPLSATGTGVRSDVAQLPLSLIEKP-RLLGESKH 411

Query: 791  ASSRALVQNGKSSIASKRFVSVPSHSTEMANKILQQLDKLVPSPKEKSYERKTATLMETS 970
              S+ L++NG +S+    F  VPS S+EMA KIL+QLDKL PSPKEKS E K A   E S
Sbjct: 412  KFSKTLIENGYNSVPGISFAHVPSQSSEMAEKILEQLDKLAPSPKEKSSELKLAAAREKS 471

Query: 971  PSKLTDGGAGDFMSRKQARVDGTHLKHISALEEKV------------------------G 1078
            P+KLT         +    VD + +        K+                        G
Sbjct: 472  PAKLTPTMLRGQALKSLENVDSSKILENVPNNNKLSDMLTACVPDARDSTFQKPDKVQNG 531

Query: 1079 PES---------SGMVTTRLKYETASSLNTAIVA-SSSSLERFSQKKQGFEEIANKDSPE 1228
            P           + + TT     T  S+ TA  A  +S++   +QKK+ F+  A++   E
Sbjct: 532  PTKFFDGSISVVNNVDTTTSSKGTMPSVKTADSAMMNSAIHPPTQKKRAFQMSAHEVYLE 591

Query: 1229 LEKNKLSSRIGCNPSVVS--------VKDKKDTPVVESKEIVDGTVTVGNPPGIFTVKKS 1384
            L+ +   + +  NP V S        V  K +T  VES +    +++    P    + KS
Sbjct: 592  LDDDFYPNGLASNPLVESREKLDKSLVDRKMETVAVESVKAEKPSISSEKSPSSSVLNKS 651

Query: 1385 RDTGASDNYRVIEKDVGFXXXXXXXXXXXXXXXXXXXMSPSSFDRISSANQPTDVGLLTS 1564
                 S+ + V EK+  F                      S+ D++    +      + S
Sbjct: 652  SYAETSETHVVAEKNPSFTFPVAPVSSMTVPPVMLAPQPSSTLDKVVPPKELYSAPPVFS 711

Query: 1565 V-SKSVEKAALFTFSSES 1615
              SK+V K    TFSS S
Sbjct: 712  FDSKNVNKFPPITFSSSS 729


>emb|CBI24989.3| unnamed protein product [Vitis vinifera]
          Length = 1196

 Score =  212 bits (539), Expect = 4e-52
 Identities = 192/558 (34%), Positives = 263/558 (47%), Gaps = 56/558 (10%)
 Frame = +2

Query: 110  GEQQIVPVQENE------LKKMNSSF--LEENVSSPVELAKAYMG-RSSKVTPSTLGLHN 262
            GE    PVQENE      L+ +++    LEE+V+SP ELAKAYMG R SKV+PS L L  
Sbjct: 115  GEISNNPVQENETESHRFLEAVSTPIRVLEEDVASPAELAKAYMGSRPSKVSPSMLSLRG 174

Query: 263  QASRGDVSRGTTIPFSPMSHSRSLVP---APVHNACVSKVYDSGYLTPVPRGRSAVYSMA 433
            QA R D +  + I   P     S+VP   APV       V ++G++ P  RGRSA+YSMA
Sbjct: 175  QAFREDSTLPSNISLHPKLPIMSIVPKSPAPVG------VSENGFMIPRSRGRSALYSMA 228

Query: 434  RTPSSRFHQTASLKGVQSMTEGNAGPSTSSRRSWEDNLLNGAKQA-SKRRISVLDSDIGS 610
            RTP SR + T ++KGV S  +   GPS+S   S E N  +G+KQ   KRR SVLDSDIGS
Sbjct: 229  RTPYSRVNPTTTIKGVTSTLDVYGGPSSSQSAS-EQNRFSGSKQGLLKRRSSVLDSDIGS 287

Query: 611  VDSIRRTRRKTNVMSPSDNLGLSIHRSSLPIPSALIGTDATKGHLSSVQNQLRLDGHKHN 790
            V  IRR R+K N++SP  +LG ++  S    P +  GT                 GHK  
Sbjct: 288  VGPIRRIRQKPNLLSPK-SLGTAVGGS----PLSATGT-----------------GHKF- 324

Query: 791  ASSRALVQNGKSSIASKRFVSVPSHSTEMANKILQQLDKLVPSPKEKSYERKTATLMETS 970
              S+ L++NG +S+    F  VPS S+EMA KIL+QLDKL PSPKEKS E K A   E S
Sbjct: 325  --SKTLIENGYNSVPGISFAHVPSQSSEMAEKILEQLDKLAPSPKEKSSELKLAAAREKS 382

Query: 971  PSKLTDGGAGDFMSRKQARVDGTHLKHISALEEKV------------------------G 1078
            P+KLT         +    VD + +        K+                        G
Sbjct: 383  PAKLTPTMLRGQALKSLENVDSSKILENVPNNNKLSDMLTACVPDARDSTFQKPDKVQNG 442

Query: 1079 PES---------SGMVTTRLKYETASSLNTAIVA-SSSSLERFSQKKQGFEEIANKDSPE 1228
            P           + + TT     T  S+ TA  A  +S++   +QKK+ F+  A++   E
Sbjct: 443  PTKFFDGSISVVNNVDTTTSSKGTMPSVKTADSAMMNSAIHPPTQKKRAFQMSAHEVYLE 502

Query: 1229 LEKNKLSSRIGCNPSVVS--------VKDKKDTPVVESKEIVDGTVTVGNPPGIFTVKKS 1384
            L+ +   + +  NP V S        V  K +T  VES +    +++    P    + KS
Sbjct: 503  LDDDFYPNGLASNPLVESREKLDKSLVDRKMETVAVESVKAEKPSISSEKSPSSSVLNKS 562

Query: 1385 RDTGASDNYRVIEKDVGFXXXXXXXXXXXXXXXXXXXMSPSSFDRISSANQPTDVGLLTS 1564
                 S+ + V EK+  F                      S+ D++    +      + S
Sbjct: 563  SYAETSETHVVAEKNPSFTFPVAPVSSMTVPPVMLAPQPSSTLDKVVPPKELYSAPPVFS 622

Query: 1565 V-SKSVEKAALFTFSSES 1615
              SK+V K    TFSS S
Sbjct: 623  FDSKNVNKFPPITFSSSS 640


>emb|CAN70065.1| hypothetical protein VITISV_015730 [Vitis vinifera]
          Length = 1389

 Score =  212 bits (539), Expect = 4e-52
 Identities = 169/449 (37%), Positives = 231/449 (51%), Gaps = 47/449 (10%)
 Frame = +2

Query: 110  GEQQIVPVQENELKKMNS--------SFLEENVSSPVELAKAYMG-RSSKVTPSTLGLHN 262
            GE    PVQENE +              LEE+V+SP ELAKAYMG R SKV+PS L L  
Sbjct: 282  GEISNNPVQENETESXRXLEAVSTPIRVLEEDVASPAELAKAYMGSRPSKVSPSMLSLRG 341

Query: 263  QASRGDVSRGTTIPFSPMSHSRSLVP---APVHNACVSKVYDSGYLTPVPRGRSAVYSMA 433
            QA R D +  + I   P     S+VP   APV       V ++G++ P  RGRSA+YSMA
Sbjct: 342  QAFREDSTLPSNISLHPKLPIMSIVPKSPAPVG------VSENGFMIPRSRGRSALYSMA 395

Query: 434  RTPSSRFHQTASLKGVQSMTEGNAGPSTSSRRSWEDNLLNGAKQA-SKRRISVLDSDIGS 610
            RTP SR + T ++KGV S  +   GPS+S   S E N  +G+KQ   KRR SVLDSDIGS
Sbjct: 396  RTPYSRVNPTTTIKGVTSTLDVYGGPSSSQSAS-EQNRFSGSKQGLLKRRSSVLDSDIGS 454

Query: 611  VDSIRRTRRKTNVMSPSDNLGLSIHRSSLPIPSALIGTDATKGHLSSVQNQLRLDGHKHN 790
            V  IRR R+K N++SP  +LG ++  S L      + +D  +  LS ++   RL G   +
Sbjct: 455  VGPIRRIRQKPNLLSPK-SLGTAVGGSPLSATGTGVRSDVAQLPLSLIEKP-RLLGESKH 512

Query: 791  ASSRALVQNGKSSIASKRFVSVPSHSTEMANKILQQLDKLVPSPKEKSYERKTATLMETS 970
              S+ L++NG +S+    F  VPS S+EMA KIL+QLDKL PSPKEKS E K A   E S
Sbjct: 513  KFSKTLIENGYNSVPGISFAHVPSQSSEMAEKILEQLDKLAPSPKEKSSELKLAAAREKS 572

Query: 971  PSKLTDGGAGDFMSRKQARVDGTHLKHISALEEKV------------------------G 1078
            P+KLT         +    VD + +        K+                        G
Sbjct: 573  PAKLTPTMLRGQALKSLENVDSSKILENVPNNNKLSDMLTACVPDARDSTFQKPDKVQNG 632

Query: 1079 PES---------SGMVTTRLKYETASSLNTAIVA-SSSSLERFSQKKQGFEEIANKDSPE 1228
            P           + + TT     T  S+ TA  A  +S++   +QKK+ F+  A++   E
Sbjct: 633  PTKFFDGSISVVNNVDTTTSSKGTMPSVKTADSAMMNSAIHPPTQKKRAFQMSAHEVYLE 692

Query: 1229 LEKNKLSSRIGCNPSVVSVKDKKDTPVVE 1315
            L+ +   + +  NP V S ++K D  +V+
Sbjct: 693  LDDDFYPNGLASNPLVES-REKLDKSLVD 720


>ref|XP_002310979.1| predicted protein [Populus trichocarpa] gi|222850799|gb|EEE88346.1|
            predicted protein [Populus trichocarpa]
          Length = 717

 Score =  176 bits (445), Expect = 3e-41
 Identities = 162/488 (33%), Positives = 238/488 (48%), Gaps = 42/488 (8%)
 Frame = +2

Query: 101  EAPGEQQIVPVQENELKKMNS------SFLEENVSSPVELAKAYMG-RSSKVTPSTLGLH 259
            E   E   VPV      ++NS      S + E+V+SP ELAKAYMG R SKV+PS L   
Sbjct: 152  EGKKELLTVPVTNGFESRINSTPIVCSSVVNEDVASPTELAKAYMGSRPSKVSPSMLESR 211

Query: 260  NQASRGDVSRGTTIPFSPMSHSRSLVPAPVHNACVSKVYDSGYLTPVPRGRSAVYSMART 439
             Q  R + +      F+P S   SL P    + C   V ++ ++TP  RGRSA+Y+MART
Sbjct: 212  CQPFRDNSTALINHTFTPKSPMMSLTPRS--SGCPG-VPENYFVTPRSRGRSAIYNMART 268

Query: 440  PSSRFHQTASLKGVQSMTEGNAGPSTSSRRSWEDNLLNGAKQ-ASKRRISVLDSDIGSVD 616
            P SR H +  L+G  + ++  AGPS SS+ + E +  +G+KQ A KRR SVLD+DIGSV 
Sbjct: 269  PYSRVHASTRLQGAGTSSDAFAGPSFSSQNALESSRFSGSKQGALKRRSSVLDNDIGSVG 328

Query: 617  SIRRTRRKTNVMSPSDNLGLSIHRSSLPIPSALIGTDATKGHLSSVQNQLRLDGHKHNAS 796
             IRR R+K+N++  S          +L I  A IG++A +   S+ +  L  +  K    
Sbjct: 329  PIRRIRQKSNLLPTS---------GTLSIRGAGIGSNAAQKLPSTEKPVLVGEPSK---- 375

Query: 797  SRALVQNGKSSIASKRFVSVPSHSTEMANKILQQLDKLVPSPKEKSYERKTATLM----- 961
                  NG +++    F  VPS S+EMA+KIL QLD LV S +EKS  + + +++     
Sbjct: 376  -----DNGDNNVHGTTFTPVPSKSSEMASKILHQLDVLV-SSREKSPAKLSPSMLRGPAL 429

Query: 962  ----ETSPSKLTD----------------GGAGDFMSRKQARVDGTHLKHISALEEKVGP 1081
                    SK  +                  A + +S+KQ +++        A   K   
Sbjct: 430  RSLENVDSSKFVEIDNDTNKLALKHDTLLPDARESVSQKQDKIEEKGPSKPIAPCGKSAL 489

Query: 1082 ESSGMVTTR-LKYETASSLNTAIVASSSSLERFSQKKQGFEEIANKDSPELEKNKLSSRI 1258
              +GM TT  LK + A    +A    S+  +   QKK+ F+  A +D  EL+ +  S+  
Sbjct: 490  AGNGMDTTSLLKNDLAGVKTSAFPVMSTFAQAPVQKKRAFQMSAQEDFLELDDDDYSNGT 549

Query: 1259 GCNPSVVSVKDKKDTPVVESKEIVDGTVTVG--------NPPGIFTVKKSRDTGASDNYR 1414
              +  +   ++K DT +VE K IV   V V         N P  +T+ K       D   
Sbjct: 550  -ASGMLAEGREKVDTKLVEKKTIVAEAVVVEKSPVQSEVNSPSSYTLNKK--NAGIDGSV 606

Query: 1415 VIEKDVGF 1438
            V+EK +GF
Sbjct: 607  VVEKSIGF 614


>ref|XP_002315412.1| predicted protein [Populus trichocarpa] gi|222864452|gb|EEF01583.1|
            predicted protein [Populus trichocarpa]
          Length = 1309

 Score =  172 bits (436), Expect = 3e-40
 Identities = 145/461 (31%), Positives = 225/461 (48%), Gaps = 38/461 (8%)
 Frame = +2

Query: 170  LEENVSSPVELAKAYM-GRSSKVTPSTLGLHNQASRGDVSRGTTIPFSPMSHSRSLVPAP 346
            LEE+V SP ELAK+YM  R  KV+PS L   +QA R + +  T   F+P S   S+ P  
Sbjct: 235  LEEDVGSPTELAKSYMRSRPLKVSPSMLESQSQALRENPTVLTNHTFTPKSPMISIAPRS 294

Query: 347  VHNACVSKVYDSGYLTPVPRGRSAVYSMARTPSSRFHQTASLKGVQSMTEGNAGPSTSSR 526
              +A   +  ++G+ TP  RGR A+YSM RTP SR H T  L+G ++ ++  AGPS+S +
Sbjct: 295  SGHA---EFPENGFATPRSRGRFAIYSMTRTPYSRVHATTGLQGTRTASDAFAGPSSSFQ 351

Query: 527  RSWEDNLLNGAKQ-ASKRRISVLDSDIGSVDSIRRTRRKTNVMSPSDNLGLSIHRSSLPI 703
             +WE+N  +G+KQ ASKRR SVLD+D+GSV  IRR R+K+N++  S  L +         
Sbjct: 352  NAWENNGFSGSKQGASKRRSSVLDNDMGSVGPIRRIRQKSNLLPMSGTLSI--------- 402

Query: 704  PSALIGTDATKGHLSSVQNQLRLDGHKHNASSRALVQNGKSSIASKRFVSVPSHSTEMAN 883
                       G +S+   +L     K   +   L  N  S++    F  VPS S+EMA+
Sbjct: 403  --------RGNGMVSNAARRL-TSTEKPVLAGEPLKDNANSNVHGTTFTPVPSKSSEMAS 453

Query: 884  KILQQLDKLVPSPKEKSYERKTATLMETSPSKLTDGGAGDFMSRKQARV--DGTHL---- 1045
            KILQQLD LV S +EKS  R + +++     +  +    DF S K   +  D   L    
Sbjct: 454  KILQQLDVLV-SSREKSPARLSPSMLRGQALRSLE----DFDSSKLLEIVNDNNKLDAKP 508

Query: 1046 --------KHISALEEKV---GPESS------------GM-VTTRLKYETASSLNTAIVA 1153
                    + +  +++K+   GP  S            GM  T+ +K + A    TA   
Sbjct: 509  NTSLPDARESVFKMKDKIEENGPSKSILPYDKSASAVNGMGATSSMKNDVAGVKTTAFPV 568

Query: 1154 SSSSLERFSQKKQGFEEIANKDSPELEKNKLSSRIGCNPSVVSVKDKKDTPVVESKEIVD 1333
            +S+ ++   QKK+ F+  A++D  EL+ +        +  +   ++K  + +VE K I  
Sbjct: 569  TSTIVQSPQQKKRAFQMSAHEDFLELDDDDDYLNRTVSGMLAEGREKIGSELVERKTIGA 628

Query: 1334 GTVTVGNPPGIFTVKK------SRDTGASDNYRVIEKDVGF 1438
              + +   P +  V        ++     D   + EK + F
Sbjct: 629  EAIVLEKSPALSEVNSPSTSTLNQKNAGIDGSVIAEKSISF 669


Top