BLASTX nr result

ID: Coptis21_contig00003065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003065
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70065.1| hypothetical protein VITISV_015730 [Vitis vinifera]    80   1e-12
emb|CBI24989.3| unnamed protein product [Vitis vinifera]               79   2e-12
ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261...    79   2e-12
ref|XP_002514439.1| conserved hypothetical protein [Ricinus comm...    65   3e-08
ref|XP_004171213.1| PREDICTED: uncharacterized protein LOC101225...    63   2e-07

>emb|CAN70065.1| hypothetical protein VITISV_015730 [Vitis vinifera]
          Length = 1389

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 83/269 (30%), Positives = 101/269 (37%), Gaps = 25/269 (9%)
 Frame = +1

Query: 382  GTVSAPFTQSVPNQLDSFTSSKASVFSTGGSP----FASSAPGANLFAXXXXXXXXXXXX 549
            GT  A  TQS+P Q    TSS   +  TG +P    F SS P     +            
Sbjct: 1123 GTGIASSTQSMPIQFGLSTSSPFGM--TGAAPLNSLFGSSTPAKLFGSSSSGLSSSVSLS 1180

Query: 550  XXXXXXXXXXXXXXXXXXXXXXXXXXXVFG---TGFKFGSSSAVXXXXXXXXXXXXXXXX 720
                                       +FG   TGF FG SSA                 
Sbjct: 1181 EASTSLSSTSGITSNVFSSNWPTTKSPIFGSTSTGFPFGGSSASVAGSNSAPMVFGSSTS 1240

Query: 721  XXXXXXXXFTSAAPVTTAPMSRFDSASP----------------GNDQM-IEDSMTEDTV 849
                    F  +A   TA +S F S+ P                 +DQM +EDSM EDTV
Sbjct: 1241 ASSANMFSFNPSAG--TASLSSFPSSQPVFGNANSVFPFGSATGNHDQMNMEDSMAEDTV 1298

Query: 850  QASTALASGFAQPTIPPQAN-SFAFTTPSSGGPPLFQFGSQQNPATPQTLSPFQPPXXXX 1026
            QAST   S   Q  I P  + +F F + +S G   FQFGSQQNPATPQ+ SPFQ      
Sbjct: 1299 QASTPAVSVLGQQAISPSPSPAFMFNSTASSGANPFQFGSQQNPATPQSPSPFQASSSLD 1358

Query: 1027 XXXXXXXXXXXXXXVDKSNRRIFKARRKR 1113
                           DK+NRR+ K +  R
Sbjct: 1359 FNAGGSFSLGTGGG-DKANRRMVKVKHPR 1386


>emb|CBI24989.3| unnamed protein product [Vitis vinifera]
          Length = 1196

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 86/271 (31%), Positives = 104/271 (38%), Gaps = 27/271 (9%)
 Frame = +1

Query: 382  GTVSAPFTQSVPNQLDSFTSSKASVFSTGGSP----FASSAPGANLF--AXXXXXXXXXX 543
            GT  A  TQS+P Q    TSS   +  TG +P    F SS P A LF  +          
Sbjct: 929  GTGIASSTQSMPIQFGLSTSSSFGM--TGAAPLNSLFGSSTP-AKLFGSSSSGLSSSVSL 985

Query: 544  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFG---TGFKFGSSSAVXXXXXXXXXXXXXX 714
                                         +FG   TGF FG SSA               
Sbjct: 986  SEVSTSLSSTSGITSNVFSSNWPPTTKSPIFGSTSTGFPFGGSSASVAGSNSAPMVFGSS 1045

Query: 715  XXXXXXXXXXFTSAAPVTTAPMSRFDSASP----------------GNDQM-IEDSMTED 843
                      F  +A   TA +S F S+ P                 +DQM +EDSM ED
Sbjct: 1046 TSASSANMFSFNPSAG--TASLSSFPSSQPVFGNANSVFPFGSATGNHDQMNMEDSMAED 1103

Query: 844  TVQASTALASGFAQPTIPPQAN-SFAFTTPSSGGPPLFQFGSQQNPATPQTLSPFQPPXX 1020
            TVQAST   S   Q  I P  + +F F + +S G   FQFGSQQNPATPQ+ SPFQ    
Sbjct: 1104 TVQASTPAVSVLGQQAISPSPSPAFMFNSTASSGANPFQFGSQQNPATPQSPSPFQTSSS 1163

Query: 1021 XXXXXXXXXXXXXXXXVDKSNRRIFKARRKR 1113
                             DK+NRR+ K +  R
Sbjct: 1164 LDFNAGGSFSLGTGGG-DKANRRMVKVKHPR 1193


>ref|XP_002264162.1| PREDICTED: uncharacterized protein LOC100261025 [Vitis vinifera]
          Length = 1285

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 86/271 (31%), Positives = 104/271 (38%), Gaps = 27/271 (9%)
 Frame = +1

Query: 382  GTVSAPFTQSVPNQLDSFTSSKASVFSTGGSP----FASSAPGANLF--AXXXXXXXXXX 543
            GT  A  TQS+P Q    TSS   +  TG +P    F SS P A LF  +          
Sbjct: 1018 GTGIASSTQSMPIQFGLSTSSSFGM--TGAAPLNSLFGSSTP-AKLFGSSSSGLSSSVSL 1074

Query: 544  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFG---TGFKFGSSSAVXXXXXXXXXXXXXX 714
                                         +FG   TGF FG SSA               
Sbjct: 1075 SEVSTSLSSTSGITSNVFSSNWPPTTKSPIFGSTSTGFPFGGSSASVAGSNSAPMVFGSS 1134

Query: 715  XXXXXXXXXXFTSAAPVTTAPMSRFDSASP----------------GNDQM-IEDSMTED 843
                      F  +A   TA +S F S+ P                 +DQM +EDSM ED
Sbjct: 1135 TSASSANMFSFNPSAG--TASLSSFPSSQPVFGNANSVFPFGSATGNHDQMNMEDSMAED 1192

Query: 844  TVQASTALASGFAQPTIPPQAN-SFAFTTPSSGGPPLFQFGSQQNPATPQTLSPFQPPXX 1020
            TVQAST   S   Q  I P  + +F F + +S G   FQFGSQQNPATPQ+ SPFQ    
Sbjct: 1193 TVQASTPAVSVLGQQAISPSPSPAFMFNSTASSGANPFQFGSQQNPATPQSPSPFQTSSS 1252

Query: 1021 XXXXXXXXXXXXXXXXVDKSNRRIFKARRKR 1113
                             DK+NRR+ K +  R
Sbjct: 1253 LDFNAGGSFSLGTGGG-DKANRRMVKVKHPR 1282


>ref|XP_002514439.1| conserved hypothetical protein [Ricinus communis]
            gi|223546435|gb|EEF47935.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1241

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 76/277 (27%), Positives = 95/277 (34%), Gaps = 34/277 (12%)
 Frame = +1

Query: 382  GTVSAPFTQSVPNQLDS-----FTSSKASVFSTGGSPFASSAPGANLFAXXXXXXXXXXX 546
            G V +  TQS+P Q  S     F  S ++ FS+G S F+SS+    LF            
Sbjct: 963  GAVFSTSTQSMPTQFGSTALSPFGFSGSTAFSSGSSLFSSSSSSGKLFGSGTTFGSTSST 1022

Query: 547  XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFG--------TGFKFGSSSAVXXXXXXXXXX 702
                                         FG        T F FG+SSA           
Sbjct: 1023 SEANPVSSTTTTTPVFGSNWPTTKSP--TFGSSNSASSSTAFVFGASSASNAVASTTSVM 1080

Query: 703  XXXXXXXXXXXXXXFTSAAPVTT--------APMSRFDSASPGNDQM-IEDSMTEDTVQA 855
                          F SAA  T         +  S F S+   NDQM +EDSM EDTVQA
Sbjct: 1081 FGSSPSGSSGSVFNFGSAASATQLQPAFASPSSASTFGSSPGNNDQMNMEDSMAEDTVQA 1140

Query: 856  STALASGFAQPTIPPQANSFAFTTPSSGGPPL------------FQFGSQQNPATPQTLS 999
            ++ +     Q T PP +     +T  +GG               FQFG Q N A PQ   
Sbjct: 1141 TSTVPVFGQQSTAPPSSGFVFGSTAPTGGNQFVSTPTVPAATNPFQFGGQSNLAAPQNQP 1200

Query: 1000 PFQPPXXXXXXXXXXXXXXXXXXVDKSNRRIFKARRK 1110
            PFQ                     DKSNR+  +  RK
Sbjct: 1201 PFQASGSLEFNAGGSFSLGTNGG-DKSNRKFIRVNRK 1236


>ref|XP_004171213.1| PREDICTED: uncharacterized protein LOC101225577 [Cucumis sativus]
          Length = 1254

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 57/171 (33%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
 Frame = +1

Query: 643  GFKFGSSSAVXXXXXXXXXXXXXXXXXXXXXXXXFTSAAPVTTAPMS--------RFDSA 798
            GF FG SS+                         FTSAA  TT+  +         F S 
Sbjct: 1082 GFSFGLSSSSSASNSAPMVFGSSSTGAPSASMFSFTSAASATTSQPAFGNSNNAFTFGST 1141

Query: 799  SPGNDQ---MIEDSMTEDTVQASTALASGFAQPTIPPQANSFAF--TTPSSGGPPLFQF- 960
             P N+     +EDSM EDT+Q ++ + S   QP  PP ++ F F  T PS  G   FQF 
Sbjct: 1142 PPANNNEQASMEDSMAEDTIQTASPMPSFGQQPLTPPPSSGFMFGSTAPSPLGANPFQFS 1201

Query: 961  GSQQNPATPQTLSPFQPP-XXXXXXXXXXXXXXXXXXVDKSNRRIFKARRK 1110
            GSQQN   PQ  SPFQ                      DKSNR+  K + K
Sbjct: 1202 GSQQN--LPQNPSPFQASGSLDFNASAGGSFSLGAGGGDKSNRKYVKVKSK 1250


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