BLASTX nr result
ID: Coptis21_contig00003055
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003055 (931 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containi... 442 e-122 ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containi... 441 e-121 ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|2... 439 e-121 ref|XP_003606459.1| Pentatricopeptide repeat-containing protein ... 432 e-119 ref|XP_003540749.1| PREDICTED: pentatricopeptide repeat-containi... 389 e-106 >ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis sativus] Length = 428 Score = 442 bits (1138), Expect = e-122 Identities = 212/302 (70%), Positives = 258/302 (85%), Gaps = 1/302 (0%) Frame = -2 Query: 930 LYKMLNLHDDALVCLELFNYASQQPRFRHDVSTYHLTIKKLGSAELYEEMDGVVNQVLAV 751 L +++L D LVC ELFN+ASQQPRFRHD S+Y +TIKKLG A++YEEMD VVNQ LAV Sbjct: 123 LCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAV 182 Query: 750 PAIGSEALFNTVIYFYTEARKLSKAIDVYKHMRKSMDEGCRPSIRTYNLLFTSFLSKRSN 571 +IGSE L+NT+IYF+TEARKL++A++++KHM+ + + CRPSIRTYNLLFT+FLS+ N Sbjct: 183 SSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRN 242 Query: 570 TYINHLYMETIRSLFKQMVND-GIEPDIFSMNSVIKGYVLSLHVNDALRVFHQMGVVYSC 394 TYINH+YMETIR LF+QMVND GIEPDIFS+N +IKGYVLSLHVNDALR+FHQMGVVYSC Sbjct: 243 TYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSC 302 Query: 393 HPDSHSYSYIIHGLCCQGRTNNAKELYAEMKSKGFVPSGKAYNSLANSLAIIGEVEEAVR 214 P+S+SY Y+IHGLC Q RT+NAKEL EMK KGFVPS +YNS+ N+LA+ GEVE+AV Sbjct: 303 LPNSYSYDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVN 362 Query: 213 LLWEMNEKRKSADFITYRTVLDEICRQGKIGEAIRLLKEFQEKDLVDGFTYNKLLYVIED 34 LWEM + R+S DFITY+TVLDE+CRQGK+ EA LL+E QEKDLVDG TY KLLYV+ED Sbjct: 363 YLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLED 422 Query: 33 EF 28 ++ Sbjct: 423 DY 424 >ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucumis sativus] Length = 428 Score = 441 bits (1134), Expect = e-121 Identities = 211/302 (69%), Positives = 258/302 (85%), Gaps = 1/302 (0%) Frame = -2 Query: 930 LYKMLNLHDDALVCLELFNYASQQPRFRHDVSTYHLTIKKLGSAELYEEMDGVVNQVLAV 751 L +++L D LVC ELFN+ASQQPRFRHD S+Y +TIKKLG A++YEEMD VVNQ LAV Sbjct: 123 LCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAV 182 Query: 750 PAIGSEALFNTVIYFYTEARKLSKAIDVYKHMRKSMDEGCRPSIRTYNLLFTSFLSKRSN 571 +IGSE L+NT+IYF+TEARKL++A++++KHM+ + + CRPSIRTYNLLFT+FLS+ N Sbjct: 183 SSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRN 242 Query: 570 TYINHLYMETIRSLFKQMVND-GIEPDIFSMNSVIKGYVLSLHVNDALRVFHQMGVVYSC 394 TYINH+YMETIR LF+QMVND GIEPDIFS+N +IKGYVLSLHVNDALR+FHQMGVVYSC Sbjct: 243 TYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSC 302 Query: 393 HPDSHSYSYIIHGLCCQGRTNNAKELYAEMKSKGFVPSGKAYNSLANSLAIIGEVEEAVR 214 P+S+S+ Y+IHGLC Q RT+NAKEL EMK KGFVPS +YNS+ N+LA+ GEVE+AV Sbjct: 303 LPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVN 362 Query: 213 LLWEMNEKRKSADFITYRTVLDEICRQGKIGEAIRLLKEFQEKDLVDGFTYNKLLYVIED 34 LWEM + R+S DFITY+TVLDE+CRQGK+ EA LL+E QEKDLVDG TY KLLYV+ED Sbjct: 363 YLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLED 422 Query: 33 EF 28 ++ Sbjct: 423 DY 424 >ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|222865910|gb|EEF03041.1| predicted protein [Populus trichocarpa] Length = 440 Score = 439 bits (1130), Expect = e-121 Identities = 206/297 (69%), Positives = 256/297 (86%) Frame = -2 Query: 918 LNLHDDALVCLELFNYASQQPRFRHDVSTYHLTIKKLGSAELYEEMDGVVNQVLAVPAIG 739 + L DD LVCLELFN+ASQQ RFRHD STYH+TIKKLG A++Y+EMD VVNQ+LAVP IG Sbjct: 133 ITLEDDPLVCLELFNWASQQHRFRHDASTYHVTIKKLGIAKMYQEMDDVVNQLLAVPHIG 192 Query: 738 SEALFNTVIYFYTEARKLSKAIDVYKHMRKSMDEGCRPSIRTYNLLFTSFLSKRSNTYIN 559 +EAL+N++IY++TEARKL++A++++K M+ S + CRPSI+TYN+L T+ LS+ N+YIN Sbjct: 193 NEALYNSIIYYFTEARKLTRAVNIFKRMKSSRNLDCRPSIKTYNILLTAMLSRGRNSYIN 252 Query: 558 HLYMETIRSLFKQMVNDGIEPDIFSMNSVIKGYVLSLHVNDALRVFHQMGVVYSCHPDSH 379 H+YMET+R LFKQMV+DG+EPDIFS+NS+IKGY LSLHVNDALRVFHQMGVVY C P+S Sbjct: 253 HMYMETMRCLFKQMVDDGVEPDIFSLNSMIKGYALSLHVNDALRVFHQMGVVYKCLPNSF 312 Query: 378 SYSYIIHGLCCQGRTNNAKELYAEMKSKGFVPSGKAYNSLANSLAIIGEVEEAVRLLWEM 199 SY Y++HGLC QGRTNNA+EL+ EMK KGFV S K++NSL N+LA+ GEV EAV LWEM Sbjct: 313 SYDYLVHGLCAQGRTNNARELFDEMKEKGFVLSNKSFNSLVNALALGGEVGEAVNYLWEM 372 Query: 198 NEKRKSADFITYRTVLDEICRQGKIGEAIRLLKEFQEKDLVDGFTYNKLLYVIEDEF 28 +K +S D ITY+TVLDEICRQG+IGEA LLKE+QEKDLVDG TY +LL+V+ED+F Sbjct: 373 IDKHRSVDLITYKTVLDEICRQGRIGEATSLLKEWQEKDLVDGITYRELLHVLEDDF 429 >ref|XP_003606459.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355507514|gb|AES88656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 418 Score = 432 bits (1110), Expect = e-119 Identities = 206/296 (69%), Positives = 257/296 (86%), Gaps = 2/296 (0%) Frame = -2 Query: 903 DALVCLELFNYASQQPRFRHDVSTYHLTIKKLGSAELYEEMDGVVNQVLAVPAIGSEALF 724 D LVCLELF++AS QPRFRH+ S++H+TIKKLG A++Y+EMD VVNQ+LAV +IG+EALF Sbjct: 109 DPLVCLELFHWASHQPRFRHNESSFHVTIKKLGDAKMYQEMDDVVNQLLAVRSIGNEALF 168 Query: 723 NTVIYFYTEARKLSKAIDVYKHMRKSMDE--GCRPSIRTYNLLFTSFLSKRSNTYINHLY 550 N +IY++TEARKL++A+ V+KHM+ S + G RPSIRTYN+LF +FLS+ NT+IN +Y Sbjct: 169 NMIIYYFTEARKLTRAVIVFKHMKCSRNPNFGFRPSIRTYNILFGAFLSRGYNTHINLVY 228 Query: 549 METIRSLFKQMVNDGIEPDIFSMNSVIKGYVLSLHVNDALRVFHQMGVVYSCHPDSHSYS 370 MET+R LF+QMVN+ IEPDIFS+NS+IKGYVLSLHVNDALR+FHQMGVVY C P+S +Y Sbjct: 229 METMRCLFRQMVNEHIEPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYDCKPNSLTYD 288 Query: 369 YIIHGLCCQGRTNNAKELYAEMKSKGFVPSGKAYNSLANSLAIIGEVEEAVRLLWEMNEK 190 Y+IHGLC +GRT NAKELY EMK+KGFVPS K+YNSL NSLA++G+VEEAV LWEM EK Sbjct: 289 YLIHGLCAKGRTENAKELYHEMKAKGFVPSSKSYNSLVNSLALVGDVEEAVNYLWEMTEK 348 Query: 189 RKSADFITYRTVLDEICRQGKIGEAIRLLKEFQEKDLVDGFTYNKLLYVIEDEFAE 22 +KS DFITYRTVLDEICR+G++ EA+R L+E QEKDLVDG TY KLLYV+ED++ + Sbjct: 349 QKSVDFITYRTVLDEICRRGRVQEAMRFLQELQEKDLVDGHTYRKLLYVLEDDYGD 404 >ref|XP_003540749.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Glycine max] Length = 438 Score = 389 bits (999), Expect = e-106 Identities = 182/264 (68%), Positives = 228/264 (86%), Gaps = 2/264 (0%) Frame = -2 Query: 813 KLGSAELYEEMDGVVNQVLAVPAIGSEALFNTVIYFYTEARKLSKAIDVYKHMRKSMDEG 634 KLG+A++Y+EMD +VNQ+LAVP IGSEALFN VIY++T+ARKL++A++V+KHM+ + Sbjct: 145 KLGAAKMYQEMDDIVNQLLAVPLIGSEALFNMVIYYFTQARKLTRAVNVFKHMKSRRNLN 204 Query: 633 C--RPSIRTYNLLFTSFLSKRSNTYINHLYMETIRSLFKQMVNDGIEPDIFSMNSVIKGY 460 C RPSIRTYN+LF +FL + SN+YINH+YMETIR LF+QMV DGI+PDIFS+NS+IKGY Sbjct: 205 CFFRPSIRTYNILFAAFLGRGSNSYINHVYMETIRCLFRQMVKDGIKPDIFSLNSMIKGY 264 Query: 459 VLSLHVNDALRVFHQMGVVYSCHPDSHSYSYIIHGLCCQGRTNNAKELYAEMKSKGFVPS 280 VLSLHVNDALR+FHQMGV+Y C P++ +Y +IHGLC QGRTNNAKELY+EMK+KGFVPS Sbjct: 265 VLSLHVNDALRIFHQMGVIYDCPPNALTYDCLIHGLCAQGRTNNAKELYSEMKTKGFVPS 324 Query: 279 GKAYNSLANSLAIIGEVEEAVRLLWEMNEKRKSADFITYRTVLDEICRQGKIGEAIRLLK 100 K+YNSL NSLA+ GE+EEAV LWEM +K++SADFITY+TVLDEICR+G + E R L+ Sbjct: 325 SKSYNSLVNSLALGGEIEEAVNYLWEMTDKQRSADFITYKTVLDEICRRGTVQEGTRFLQ 384 Query: 99 EFQEKDLVDGFTYNKLLYVIEDEF 28 E QEKDLVDG Y KLLYV+ED++ Sbjct: 385 ELQEKDLVDGHAYRKLLYVLEDDY 408