BLASTX nr result
ID: Coptis21_contig00003048
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003048 (2061 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated... 683 0.0 ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated... 679 0.0 emb|CBI17936.3| unnamed protein product [Vitis vinifera] 670 0.0 ref|XP_002520985.1| nucleotide binding protein, putative [Ricinu... 640 0.0 ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated... 637 e-180 >ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Vitis vinifera] Length = 569 Score = 683 bits (1763), Expect = 0.0 Identities = 360/571 (63%), Positives = 419/571 (73%), Gaps = 11/571 (1%) Frame = +2 Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKIRNXXXXXX 256 SLISQ L K + + K+E+ D P L+ +E E KE + K+RKK R Sbjct: 2 SLISQNILPKNRINKTKREDIDIPSPLEGNEDIEDRKELGPDTSRIKRRKKERKEEEKQL 61 Query: 257 XXXXXXXXXXXXXL-FGSLYSPNEFGK--EEESGNEVKGPYSDPLLFFTDRTANGVVTVX 427 L FGSLY+P EFGK EEE + V+ D LFFTDR+AN V+V Sbjct: 62 EVEQEREMKKLENLLFGSLYAPVEFGKGGEEEVRDMVE---KDSALFFTDRSANSSVSVY 118 Query: 428 XXXXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGS---D 598 N+ + +KP W D EE+ I+I KVNR+RKL+ EEDE+ I GS Sbjct: 119 EEDAELPEESNDEEDTKQRKPVWVDEEEERTNINIAKVNRLRKLRKEEDESVISGSAYVS 178 Query: 599 RLRAYHVKTNPPPKWAQ-----RGSGPIHDDESDEEYGALVDQAVEDNQENKSILRTNED 763 RLRA H K NP +WAQ R D+ SDEE GA+V +D + ILRT+ED Sbjct: 179 RLRAQHAKLNPGTEWAQLDSQLRDCSSYDDESSDEENGAVVAPGYKDVEAVDDILRTDED 238 Query: 764 LVVKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDG 943 L+VKS KLLPG+LEYSRL+DANAEDPSN INSVQFHRN FFQ+DG Sbjct: 239 LIVKSSTKLLPGLLEYSRLIDANAEDPSNGPINSVQFHRNAQLLLTAGLDRRLRFFQIDG 298 Query: 944 KRNTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKS 1123 KRNT IQSIFL+DCPIRKA+FLPDGS+VI+ GRRKFFYSFDL A+ D+IGPL GREEKS Sbjct: 299 KRNTKIQSIFLDDCPIRKASFLPDGSEVIIAGRRKFFYSFDLVKARVDKIGPLTGREEKS 358 Query: 1124 LEVFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGD 1303 LEVF+VSPDS TIAF+GNEG ILLVS +TKELIGT+KMNG+ RSLAFTDDG+QLLSSGGD Sbjct: 359 LEVFEVSPDSGTIAFVGNEGCILLVSSRTKELIGTVKMNGTVRSLAFTDDGKQLLSSGGD 418 Query: 1304 GHIYHWDLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRK 1483 GHIYHWDLRTRTCFHKAIDEGCI G++L SPNGALFAAGSSSGIVN+YN+EEFLGGKRK Sbjct: 419 GHIYHWDLRTRTCFHKAIDEGCINGTSLCASPNGALFAAGSSSGIVNVYNKEEFLGGKRK 478 Query: 1484 PMKTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPR 1663 P+KTIENLTT+VD+LKFN+DAQILAI S+M+KNSLKL+H+PS+TV+SNWPPP +TLH+PR Sbjct: 479 PIKTIENLTTKVDFLKFNNDAQILAISSSMKKNSLKLIHIPSYTVYSNWPPPNRTLHYPR 538 Query: 1664 CLDFSPGGGFMATGNADGKVFLYKLHHYQHA 1756 CLDFSPGGGFMA GNA GKV LYKLHHYQHA Sbjct: 539 CLDFSPGGGFMAVGNAAGKVLLYKLHHYQHA 569 >ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Vitis vinifera] Length = 568 Score = 679 bits (1753), Expect = 0.0 Identities = 359/569 (63%), Positives = 414/569 (72%), Gaps = 9/569 (1%) Frame = +2 Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKI-RNXXXXX 253 SLISQ LRK V + K+E+ D P L+ +E NE KE L++KKRKK + Sbjct: 2 SLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQL 60 Query: 254 XXXXXXXXXXXXXXLFGSLYSPNEFGKEEESGNEVKGPYSDPLLFFTDRTANGVVTVXXX 433 LFGSLY P EFGK E + K D LFFTDR+AN ++ Sbjct: 61 EVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAE-KDSTLFFTDRSANSALSFYEE 119 Query: 434 XXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGS---DRL 604 + + +KP W D EE+ I+I KVNR+RKL+ EEDE+ I GS RL Sbjct: 120 DAEFPEESSGEEDTKQRKPVWVDEEEEKTNINISKVNRLRKLRKEEDESLISGSVYVSRL 179 Query: 605 RAYHVKTNPPPKWAQRGS-----GPIHDDESDEEYGALVDQAVEDNQENKSILRTNEDLV 769 RA H K NP +WAQ S + + SDEE GA++ +D + ILRTNEDLV Sbjct: 180 RAQHAKLNPGTEWAQLDSWSRTYSSDYGESSDEENGAVIAPGHKDVEAVDDILRTNEDLV 239 Query: 770 VKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDGKR 949 VKS KLLPG+LEYSRLVDANAEDPSN INSVQFH N FFQ+DG+R Sbjct: 240 VKSGTKLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRR 299 Query: 950 NTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLE 1129 NT IQSIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYSFDL AK D+IGPL+GREEKSLE Sbjct: 300 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLE 359 Query: 1130 VFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGH 1309 F+VSPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDGH Sbjct: 360 AFEVSPDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGH 419 Query: 1310 IYHWDLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRKPM 1489 IYHWDLRTRTCFHK DEGCI G+AL SP+GALFAAGS+SGIVN+YN+EEFLGGKRKPM Sbjct: 420 IYHWDLRTRTCFHKGTDEGCINGTALCASPSGALFAAGSASGIVNVYNKEEFLGGKRKPM 479 Query: 1490 KTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPRCL 1669 KTIEN+TT+VD++KFN+DAQILAI S+M+KNSLKL+H+PS+TVFSNWPPP +TLH+PRCL Sbjct: 480 KTIENVTTKVDFMKFNNDAQILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCL 539 Query: 1670 DFSPGGGFMATGNADGKVFLYKLHHYQHA 1756 DFSPGGGFMA G+A GKV LYKLHHYQHA Sbjct: 540 DFSPGGGFMAVGSAAGKVLLYKLHHYQHA 568 >emb|CBI17936.3| unnamed protein product [Vitis vinifera] Length = 591 Score = 670 bits (1728), Expect = 0.0 Identities = 357/564 (63%), Positives = 409/564 (72%), Gaps = 4/564 (0%) Frame = +2 Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKI-RNXXXXX 253 SLISQ LRK V + K+E+ D P L+ +E NE KE L++KKRKK + Sbjct: 39 SLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQL 97 Query: 254 XXXXXXXXXXXXXXLFGSLYSPNEFGKEEESGNEVKGPYSDPLLFFTDRTANGVVTVXXX 433 LFGSLY P EFGK E + K D LFFTDR+AN ++ Sbjct: 98 EVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAE-KDSTLFFTDRSANSALSFYEE 156 Query: 434 XXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGS---DRL 604 + + +KP W D EE+ I+I KVNR+RKL+ EEDE+ I GS RL Sbjct: 157 DAEFPEESSGEEDTKQRKPVWVDEEEEKTNINISKVNRLRKLRKEEDESLISGSVYVSRL 216 Query: 605 RAYHVKTNPPPKWAQRGSGPIHDDESDEEYGALVDQAVEDNQENKSILRTNEDLVVKSRV 784 RA H K NP +WAQ S +YG +AV+D ILRTNEDLVVKS Sbjct: 217 RAQHAKLNPGTEWAQLDSW---SRTYSSDYGHKDVEAVDD------ILRTNEDLVVKSGT 267 Query: 785 KLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDGKRNTMIQ 964 KLLPG+LEYSRLVDANAEDPSN INSVQFH N FFQ+DG+RNT IQ Sbjct: 268 KLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRRNTKIQ 327 Query: 965 SIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLEVFDVS 1144 SIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYSFDL AK D+IGPL+GREEKSLE F+VS Sbjct: 328 SIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLEAFEVS 387 Query: 1145 PDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGHIYHWD 1324 PDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDGHIYHWD Sbjct: 388 PDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGHIYHWD 447 Query: 1325 LRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRKPMKTIEN 1504 LRTRTCFHK DEGCI G+AL SP+GALFAAGS+SGIVN+YN+EEFLGGKRKPMKTIEN Sbjct: 448 LRTRTCFHKGTDEGCINGTALCASPSGALFAAGSASGIVNVYNKEEFLGGKRKPMKTIEN 507 Query: 1505 LTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPRCLDFSPG 1684 +TT+VD++KFN+DAQILAI S+M+KNSLKL+H+PS+TVFSNWPPP +TLH+PRCLDFSPG Sbjct: 508 VTTKVDFMKFNNDAQILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCLDFSPG 567 Query: 1685 GGFMATGNADGKVFLYKLHHYQHA 1756 GGFMA G+A GKV LYKLHHYQHA Sbjct: 568 GGFMAVGSAAGKVLLYKLHHYQHA 591 >ref|XP_002520985.1| nucleotide binding protein, putative [Ricinus communis] gi|223539822|gb|EEF41402.1| nucleotide binding protein, putative [Ricinus communis] Length = 566 Score = 640 bits (1652), Expect = 0.0 Identities = 340/571 (59%), Positives = 406/571 (71%), Gaps = 11/571 (1%) Frame = +2 Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKN-EVAKESSLVGLKSKKRKKIRNXXXXX 253 SLISQ K V + K+EE D P ++ +E+N E ++S L ++KKR+ R Sbjct: 2 SLISQNVGSKNRV-KTKKEETDGPAFMEGNEENNEDGRDSELAMSRAKKRR--REKEEQL 58 Query: 254 XXXXXXXXXXXXXXLFGSLYSPNEFGKEEE--SGNEVKGPYSDPLLFFTDRTANGVVTVX 427 LFGSLYSP EFG +EE + +EV+ + LFF DR+A+ + V Sbjct: 59 EVDEGKEMKRLENFLFGSLYSPIEFGNDEEEKAHDEVE---NGSALFFVDRSASTELCVY 115 Query: 428 XXXXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGSD--- 598 + E +KP W D EE IDI NR+RKL+ E+ E I G + Sbjct: 116 KEESEVLEKSDVDEEPRQRKPVWVDEEEAKTTIDIAHTNRLRKLRKEDSENLISGREYVA 175 Query: 599 RLRAYHVKTNPPPKWAQ-----RGSGPIHDDESDEEYGALVDQAVEDNQENKSILRTNED 763 RLRA+H K NP +WA+ R +G D+ SDEE G + + E + + RTNED Sbjct: 176 RLRAHHAKLNPGTEWARLDLQSRNNGSYDDESSDEENGIVTARGYEVAETFDDVFRTNED 235 Query: 764 LVVKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDG 943 LVVKSR KLLPGILEYSRLVDANA++ SN INSVQFHRN FFQ+DG Sbjct: 236 LVVKSRKKLLPGILEYSRLVDANAQEASNGPINSVQFHRNAQLLLAAGLDRRLRFFQIDG 295 Query: 944 KRNTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKS 1123 KRNT IQSIF++DCPIRKA+FLPDGSQVI+ GRRKFFYSFDL +AK D+IGPLVGREEKS Sbjct: 296 KRNTKIQSIFIDDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVNAKVDKIGPLVGREEKS 355 Query: 1124 LEVFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGD 1303 LE F+VSPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+AR+LAF+ +G+QLLS GGD Sbjct: 356 LEFFEVSPDSSTIAFVGNEGYILLVSSKTKELIGTLKMNGTARALAFSGNGQQLLSHGGD 415 Query: 1304 GHIYHWDLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRK 1483 G +YHWDLRTRTC HKA+DEGCI G+AL SPNG+LFAAGS GIVN+YN E FLGG RK Sbjct: 416 GQVYHWDLRTRTCIHKAVDEGCINGTALSASPNGSLFAAGSDVGIVNVYNNELFLGGNRK 475 Query: 1484 PMKTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPR 1663 P+KTI+NLTT+VD++KF++DAQILAICS M+KNSLKL+H+PS+TVFSNWPP TLH PR Sbjct: 476 PIKTIDNLTTKVDFMKFSNDAQILAICSHMKKNSLKLIHLPSYTVFSNWPPGNTTLHFPR 535 Query: 1664 CLDFSPGGGFMATGNADGKVFLYKLHHYQHA 1756 CLDFSPGGGFMA GNA GKV LYKLHHYQHA Sbjct: 536 CLDFSPGGGFMAVGNAAGKVLLYKLHHYQHA 566 >ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Cucumis sativus] gi|449521663|ref|XP_004167849.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Cucumis sativus] Length = 564 Score = 637 bits (1642), Expect = e-180 Identities = 335/565 (59%), Positives = 393/565 (69%), Gaps = 5/565 (0%) Frame = +2 Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKIRNXXXXXX 256 SLISQ + ++ +E P S + +S L ++KKRKK Sbjct: 2 SLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQL 61 Query: 257 XXXXXXXXXXXXXLFGSLYSPNEFGKEEESGNEVKGPYSDPLLFFTDRTANGVVTVXXXX 436 LFGSLYSP EFGK+EE N P L+ DR+A+ ++ Sbjct: 62 VKEQKEMMKLENFLFGSLYSPVEFGKDEEQ-NGFNSEEKTPALYIMDRSADHSLSAYEDD 120 Query: 437 XXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGSD---RLR 607 N E +KP W D EE+ ++I V+R+RKL+ EE E SI GS+ RLR Sbjct: 121 YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR 180 Query: 608 AYHVKTNPPPKWAQRGSGPIHDDE--SDEEYGALVDQAVEDNQENKSILRTNEDLVVKSR 781 A H K NP +WAQ + DD+ SD+E + ++ ILRT+E LVVKS Sbjct: 181 AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG 240 Query: 782 VKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDGKRNTMI 961 KL+PG+L YSRLVDANAE+PSN INSVQFHRN FFQ+DGKRNT I Sbjct: 241 GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI 300 Query: 962 QSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLEVFDV 1141 QSIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYS DL AK D+IGPLVGREEKSLE F++ Sbjct: 301 QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI 360 Query: 1142 SPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGHIYHW 1321 SPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDG IYHW Sbjct: 361 SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW 420 Query: 1322 DLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRKPMKTIE 1501 DLRTRTC HKA+DEGCI G+AL TSPNG LFAAGS+SGIVNIYNR+EFLGGK+KP+K IE Sbjct: 421 DLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPLKAIE 479 Query: 1502 NLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPRCLDFSP 1681 NLTT+VD+LKFNHDAQILAICS M+++SLKL+H+PSFT+FSNWPPPK+ L +P CLDFSP Sbjct: 480 NLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSP 539 Query: 1682 GGGFMATGNADGKVFLYKLHHYQHA 1756 GG+MA GNA GKV LYKLHHY HA Sbjct: 540 EGGYMAVGNAAGKVLLYKLHHYHHA 564