BLASTX nr result
ID: Coptis21_contig00003048
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003048
(2061 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated... 683 0.0
ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated... 679 0.0
emb|CBI17936.3| unnamed protein product [Vitis vinifera] 670 0.0
ref|XP_002520985.1| nucleotide binding protein, putative [Ricinu... 640 0.0
ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated... 637 e-180
>ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
[Vitis vinifera]
Length = 569
Score = 683 bits (1763), Expect = 0.0
Identities = 360/571 (63%), Positives = 419/571 (73%), Gaps = 11/571 (1%)
Frame = +2
Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKIRNXXXXXX 256
SLISQ L K + + K+E+ D P L+ +E E KE + K+RKK R
Sbjct: 2 SLISQNILPKNRINKTKREDIDIPSPLEGNEDIEDRKELGPDTSRIKRRKKERKEEEKQL 61
Query: 257 XXXXXXXXXXXXXL-FGSLYSPNEFGK--EEESGNEVKGPYSDPLLFFTDRTANGVVTVX 427
L FGSLY+P EFGK EEE + V+ D LFFTDR+AN V+V
Sbjct: 62 EVEQEREMKKLENLLFGSLYAPVEFGKGGEEEVRDMVE---KDSALFFTDRSANSSVSVY 118
Query: 428 XXXXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGS---D 598
N+ + +KP W D EE+ I+I KVNR+RKL+ EEDE+ I GS
Sbjct: 119 EEDAELPEESNDEEDTKQRKPVWVDEEEERTNINIAKVNRLRKLRKEEDESVISGSAYVS 178
Query: 599 RLRAYHVKTNPPPKWAQ-----RGSGPIHDDESDEEYGALVDQAVEDNQENKSILRTNED 763
RLRA H K NP +WAQ R D+ SDEE GA+V +D + ILRT+ED
Sbjct: 179 RLRAQHAKLNPGTEWAQLDSQLRDCSSYDDESSDEENGAVVAPGYKDVEAVDDILRTDED 238
Query: 764 LVVKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDG 943
L+VKS KLLPG+LEYSRL+DANAEDPSN INSVQFHRN FFQ+DG
Sbjct: 239 LIVKSSTKLLPGLLEYSRLIDANAEDPSNGPINSVQFHRNAQLLLTAGLDRRLRFFQIDG 298
Query: 944 KRNTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKS 1123
KRNT IQSIFL+DCPIRKA+FLPDGS+VI+ GRRKFFYSFDL A+ D+IGPL GREEKS
Sbjct: 299 KRNTKIQSIFLDDCPIRKASFLPDGSEVIIAGRRKFFYSFDLVKARVDKIGPLTGREEKS 358
Query: 1124 LEVFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGD 1303
LEVF+VSPDS TIAF+GNEG ILLVS +TKELIGT+KMNG+ RSLAFTDDG+QLLSSGGD
Sbjct: 359 LEVFEVSPDSGTIAFVGNEGCILLVSSRTKELIGTVKMNGTVRSLAFTDDGKQLLSSGGD 418
Query: 1304 GHIYHWDLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRK 1483
GHIYHWDLRTRTCFHKAIDEGCI G++L SPNGALFAAGSSSGIVN+YN+EEFLGGKRK
Sbjct: 419 GHIYHWDLRTRTCFHKAIDEGCINGTSLCASPNGALFAAGSSSGIVNVYNKEEFLGGKRK 478
Query: 1484 PMKTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPR 1663
P+KTIENLTT+VD+LKFN+DAQILAI S+M+KNSLKL+H+PS+TV+SNWPPP +TLH+PR
Sbjct: 479 PIKTIENLTTKVDFLKFNNDAQILAISSSMKKNSLKLIHIPSYTVYSNWPPPNRTLHYPR 538
Query: 1664 CLDFSPGGGFMATGNADGKVFLYKLHHYQHA 1756
CLDFSPGGGFMA GNA GKV LYKLHHYQHA
Sbjct: 539 CLDFSPGGGFMAVGNAAGKVLLYKLHHYQHA 569
>ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
[Vitis vinifera]
Length = 568
Score = 679 bits (1753), Expect = 0.0
Identities = 359/569 (63%), Positives = 414/569 (72%), Gaps = 9/569 (1%)
Frame = +2
Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKI-RNXXXXX 253
SLISQ LRK V + K+E+ D P L+ +E NE KE L++KKRKK +
Sbjct: 2 SLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQL 60
Query: 254 XXXXXXXXXXXXXXLFGSLYSPNEFGKEEESGNEVKGPYSDPLLFFTDRTANGVVTVXXX 433
LFGSLY P EFGK E + K D LFFTDR+AN ++
Sbjct: 61 EVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAE-KDSTLFFTDRSANSALSFYEE 119
Query: 434 XXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGS---DRL 604
+ + +KP W D EE+ I+I KVNR+RKL+ EEDE+ I GS RL
Sbjct: 120 DAEFPEESSGEEDTKQRKPVWVDEEEEKTNINISKVNRLRKLRKEEDESLISGSVYVSRL 179
Query: 605 RAYHVKTNPPPKWAQRGS-----GPIHDDESDEEYGALVDQAVEDNQENKSILRTNEDLV 769
RA H K NP +WAQ S + + SDEE GA++ +D + ILRTNEDLV
Sbjct: 180 RAQHAKLNPGTEWAQLDSWSRTYSSDYGESSDEENGAVIAPGHKDVEAVDDILRTNEDLV 239
Query: 770 VKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDGKR 949
VKS KLLPG+LEYSRLVDANAEDPSN INSVQFH N FFQ+DG+R
Sbjct: 240 VKSGTKLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRR 299
Query: 950 NTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLE 1129
NT IQSIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYSFDL AK D+IGPL+GREEKSLE
Sbjct: 300 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLE 359
Query: 1130 VFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGH 1309
F+VSPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDGH
Sbjct: 360 AFEVSPDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGH 419
Query: 1310 IYHWDLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRKPM 1489
IYHWDLRTRTCFHK DEGCI G+AL SP+GALFAAGS+SGIVN+YN+EEFLGGKRKPM
Sbjct: 420 IYHWDLRTRTCFHKGTDEGCINGTALCASPSGALFAAGSASGIVNVYNKEEFLGGKRKPM 479
Query: 1490 KTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPRCL 1669
KTIEN+TT+VD++KFN+DAQILAI S+M+KNSLKL+H+PS+TVFSNWPPP +TLH+PRCL
Sbjct: 480 KTIENVTTKVDFMKFNNDAQILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCL 539
Query: 1670 DFSPGGGFMATGNADGKVFLYKLHHYQHA 1756
DFSPGGGFMA G+A GKV LYKLHHYQHA
Sbjct: 540 DFSPGGGFMAVGSAAGKVLLYKLHHYQHA 568
>emb|CBI17936.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 670 bits (1728), Expect = 0.0
Identities = 357/564 (63%), Positives = 409/564 (72%), Gaps = 4/564 (0%)
Frame = +2
Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKI-RNXXXXX 253
SLISQ LRK V + K+E+ D P L+ +E NE KE L++KKRKK +
Sbjct: 39 SLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQL 97
Query: 254 XXXXXXXXXXXXXXLFGSLYSPNEFGKEEESGNEVKGPYSDPLLFFTDRTANGVVTVXXX 433
LFGSLY P EFGK E + K D LFFTDR+AN ++
Sbjct: 98 EVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAE-KDSTLFFTDRSANSALSFYEE 156
Query: 434 XXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGS---DRL 604
+ + +KP W D EE+ I+I KVNR+RKL+ EEDE+ I GS RL
Sbjct: 157 DAEFPEESSGEEDTKQRKPVWVDEEEEKTNINISKVNRLRKLRKEEDESLISGSVYVSRL 216
Query: 605 RAYHVKTNPPPKWAQRGSGPIHDDESDEEYGALVDQAVEDNQENKSILRTNEDLVVKSRV 784
RA H K NP +WAQ S +YG +AV+D ILRTNEDLVVKS
Sbjct: 217 RAQHAKLNPGTEWAQLDSW---SRTYSSDYGHKDVEAVDD------ILRTNEDLVVKSGT 267
Query: 785 KLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDGKRNTMIQ 964
KLLPG+LEYSRLVDANAEDPSN INSVQFH N FFQ+DG+RNT IQ
Sbjct: 268 KLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRRNTKIQ 327
Query: 965 SIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLEVFDVS 1144
SIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYSFDL AK D+IGPL+GREEKSLE F+VS
Sbjct: 328 SIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLEAFEVS 387
Query: 1145 PDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGHIYHWD 1324
PDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDGHIYHWD
Sbjct: 388 PDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGHIYHWD 447
Query: 1325 LRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRKPMKTIEN 1504
LRTRTCFHK DEGCI G+AL SP+GALFAAGS+SGIVN+YN+EEFLGGKRKPMKTIEN
Sbjct: 448 LRTRTCFHKGTDEGCINGTALCASPSGALFAAGSASGIVNVYNKEEFLGGKRKPMKTIEN 507
Query: 1505 LTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPRCLDFSPG 1684
+TT+VD++KFN+DAQILAI S+M+KNSLKL+H+PS+TVFSNWPPP +TLH+PRCLDFSPG
Sbjct: 508 VTTKVDFMKFNNDAQILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCLDFSPG 567
Query: 1685 GGFMATGNADGKVFLYKLHHYQHA 1756
GGFMA G+A GKV LYKLHHYQHA
Sbjct: 568 GGFMAVGSAAGKVLLYKLHHYQHA 591
>ref|XP_002520985.1| nucleotide binding protein, putative [Ricinus communis]
gi|223539822|gb|EEF41402.1| nucleotide binding protein,
putative [Ricinus communis]
Length = 566
Score = 640 bits (1652), Expect = 0.0
Identities = 340/571 (59%), Positives = 406/571 (71%), Gaps = 11/571 (1%)
Frame = +2
Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKN-EVAKESSLVGLKSKKRKKIRNXXXXX 253
SLISQ K V + K+EE D P ++ +E+N E ++S L ++KKR+ R
Sbjct: 2 SLISQNVGSKNRV-KTKKEETDGPAFMEGNEENNEDGRDSELAMSRAKKRR--REKEEQL 58
Query: 254 XXXXXXXXXXXXXXLFGSLYSPNEFGKEEE--SGNEVKGPYSDPLLFFTDRTANGVVTVX 427
LFGSLYSP EFG +EE + +EV+ + LFF DR+A+ + V
Sbjct: 59 EVDEGKEMKRLENFLFGSLYSPIEFGNDEEEKAHDEVE---NGSALFFVDRSASTELCVY 115
Query: 428 XXXXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGSD--- 598
+ E +KP W D EE IDI NR+RKL+ E+ E I G +
Sbjct: 116 KEESEVLEKSDVDEEPRQRKPVWVDEEEAKTTIDIAHTNRLRKLRKEDSENLISGREYVA 175
Query: 599 RLRAYHVKTNPPPKWAQ-----RGSGPIHDDESDEEYGALVDQAVEDNQENKSILRTNED 763
RLRA+H K NP +WA+ R +G D+ SDEE G + + E + + RTNED
Sbjct: 176 RLRAHHAKLNPGTEWARLDLQSRNNGSYDDESSDEENGIVTARGYEVAETFDDVFRTNED 235
Query: 764 LVVKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDG 943
LVVKSR KLLPGILEYSRLVDANA++ SN INSVQFHRN FFQ+DG
Sbjct: 236 LVVKSRKKLLPGILEYSRLVDANAQEASNGPINSVQFHRNAQLLLAAGLDRRLRFFQIDG 295
Query: 944 KRNTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKS 1123
KRNT IQSIF++DCPIRKA+FLPDGSQVI+ GRRKFFYSFDL +AK D+IGPLVGREEKS
Sbjct: 296 KRNTKIQSIFIDDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVNAKVDKIGPLVGREEKS 355
Query: 1124 LEVFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGD 1303
LE F+VSPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+AR+LAF+ +G+QLLS GGD
Sbjct: 356 LEFFEVSPDSSTIAFVGNEGYILLVSSKTKELIGTLKMNGTARALAFSGNGQQLLSHGGD 415
Query: 1304 GHIYHWDLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRK 1483
G +YHWDLRTRTC HKA+DEGCI G+AL SPNG+LFAAGS GIVN+YN E FLGG RK
Sbjct: 416 GQVYHWDLRTRTCIHKAVDEGCINGTALSASPNGSLFAAGSDVGIVNVYNNELFLGGNRK 475
Query: 1484 PMKTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPR 1663
P+KTI+NLTT+VD++KF++DAQILAICS M+KNSLKL+H+PS+TVFSNWPP TLH PR
Sbjct: 476 PIKTIDNLTTKVDFMKFSNDAQILAICSHMKKNSLKLIHLPSYTVFSNWPPGNTTLHFPR 535
Query: 1664 CLDFSPGGGFMATGNADGKVFLYKLHHYQHA 1756
CLDFSPGGGFMA GNA GKV LYKLHHYQHA
Sbjct: 536 CLDFSPGGGFMAVGNAAGKVLLYKLHHYQHA 566
>ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
[Cucumis sativus] gi|449521663|ref|XP_004167849.1|
PREDICTED: U3 small nucleolar RNA-associated protein 18
homolog [Cucumis sativus]
Length = 564
Score = 637 bits (1642), Expect = e-180
Identities = 335/565 (59%), Positives = 393/565 (69%), Gaps = 5/565 (0%)
Frame = +2
Query: 77 SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKIRNXXXXXX 256
SLISQ + ++ +E P S + +S L ++KKRKK
Sbjct: 2 SLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQL 61
Query: 257 XXXXXXXXXXXXXLFGSLYSPNEFGKEEESGNEVKGPYSDPLLFFTDRTANGVVTVXXXX 436
LFGSLYSP EFGK+EE N P L+ DR+A+ ++
Sbjct: 62 VKEQKEMMKLENFLFGSLYSPVEFGKDEEQ-NGFNSEEKTPALYIMDRSADHSLSAYEDD 120
Query: 437 XXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGSD---RLR 607
N E +KP W D EE+ ++I V+R+RKL+ EE E SI GS+ RLR
Sbjct: 121 YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR 180
Query: 608 AYHVKTNPPPKWAQRGSGPIHDDE--SDEEYGALVDQAVEDNQENKSILRTNEDLVVKSR 781
A H K NP +WAQ + DD+ SD+E + ++ ILRT+E LVVKS
Sbjct: 181 AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG 240
Query: 782 VKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDGKRNTMI 961
KL+PG+L YSRLVDANAE+PSN INSVQFHRN FFQ+DGKRNT I
Sbjct: 241 GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI 300
Query: 962 QSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLEVFDV 1141
QSIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYS DL AK D+IGPLVGREEKSLE F++
Sbjct: 301 QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI 360
Query: 1142 SPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGHIYHW 1321
SPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDG IYHW
Sbjct: 361 SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW 420
Query: 1322 DLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRKPMKTIE 1501
DLRTRTC HKA+DEGCI G+AL TSPNG LFAAGS+SGIVNIYNR+EFLGGK+KP+K IE
Sbjct: 421 DLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPLKAIE 479
Query: 1502 NLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPRCLDFSP 1681
NLTT+VD+LKFNHDAQILAICS M+++SLKL+H+PSFT+FSNWPPPK+ L +P CLDFSP
Sbjct: 480 NLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSP 539
Query: 1682 GGGFMATGNADGKVFLYKLHHYQHA 1756
GG+MA GNA GKV LYKLHHY HA
Sbjct: 540 EGGYMAVGNAAGKVLLYKLHHYHHA 564