BLASTX nr result

ID: Coptis21_contig00003048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003048
         (2061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated...   683   0.0  
ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated...   679   0.0  
emb|CBI17936.3| unnamed protein product [Vitis vinifera]              670   0.0  
ref|XP_002520985.1| nucleotide binding protein, putative [Ricinu...   640   0.0  
ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated...   637   e-180

>ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Vitis vinifera]
          Length = 569

 Score =  683 bits (1763), Expect = 0.0
 Identities = 360/571 (63%), Positives = 419/571 (73%), Gaps = 11/571 (1%)
 Frame = +2

Query: 77   SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKIRNXXXXXX 256
            SLISQ  L K  + + K+E+ D P  L+ +E  E  KE      + K+RKK R       
Sbjct: 2    SLISQNILPKNRINKTKREDIDIPSPLEGNEDIEDRKELGPDTSRIKRRKKERKEEEKQL 61

Query: 257  XXXXXXXXXXXXXL-FGSLYSPNEFGK--EEESGNEVKGPYSDPLLFFTDRTANGVVTVX 427
                         L FGSLY+P EFGK  EEE  + V+    D  LFFTDR+AN  V+V 
Sbjct: 62   EVEQEREMKKLENLLFGSLYAPVEFGKGGEEEVRDMVE---KDSALFFTDRSANSSVSVY 118

Query: 428  XXXXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGS---D 598
                      N+  +   +KP W D EE+   I+I KVNR+RKL+ EEDE+ I GS    
Sbjct: 119  EEDAELPEESNDEEDTKQRKPVWVDEEEERTNINIAKVNRLRKLRKEEDESVISGSAYVS 178

Query: 599  RLRAYHVKTNPPPKWAQ-----RGSGPIHDDESDEEYGALVDQAVEDNQENKSILRTNED 763
            RLRA H K NP  +WAQ     R      D+ SDEE GA+V    +D +    ILRT+ED
Sbjct: 179  RLRAQHAKLNPGTEWAQLDSQLRDCSSYDDESSDEENGAVVAPGYKDVEAVDDILRTDED 238

Query: 764  LVVKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDG 943
            L+VKS  KLLPG+LEYSRL+DANAEDPSN  INSVQFHRN              FFQ+DG
Sbjct: 239  LIVKSSTKLLPGLLEYSRLIDANAEDPSNGPINSVQFHRNAQLLLTAGLDRRLRFFQIDG 298

Query: 944  KRNTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKS 1123
            KRNT IQSIFL+DCPIRKA+FLPDGS+VI+ GRRKFFYSFDL  A+ D+IGPL GREEKS
Sbjct: 299  KRNTKIQSIFLDDCPIRKASFLPDGSEVIIAGRRKFFYSFDLVKARVDKIGPLTGREEKS 358

Query: 1124 LEVFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGD 1303
            LEVF+VSPDS TIAF+GNEG ILLVS +TKELIGT+KMNG+ RSLAFTDDG+QLLSSGGD
Sbjct: 359  LEVFEVSPDSGTIAFVGNEGCILLVSSRTKELIGTVKMNGTVRSLAFTDDGKQLLSSGGD 418

Query: 1304 GHIYHWDLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRK 1483
            GHIYHWDLRTRTCFHKAIDEGCI G++L  SPNGALFAAGSSSGIVN+YN+EEFLGGKRK
Sbjct: 419  GHIYHWDLRTRTCFHKAIDEGCINGTSLCASPNGALFAAGSSSGIVNVYNKEEFLGGKRK 478

Query: 1484 PMKTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPR 1663
            P+KTIENLTT+VD+LKFN+DAQILAI S+M+KNSLKL+H+PS+TV+SNWPPP +TLH+PR
Sbjct: 479  PIKTIENLTTKVDFLKFNNDAQILAISSSMKKNSLKLIHIPSYTVYSNWPPPNRTLHYPR 538

Query: 1664 CLDFSPGGGFMATGNADGKVFLYKLHHYQHA 1756
            CLDFSPGGGFMA GNA GKV LYKLHHYQHA
Sbjct: 539  CLDFSPGGGFMAVGNAAGKVLLYKLHHYQHA 569


>ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Vitis vinifera]
          Length = 568

 Score =  679 bits (1753), Expect = 0.0
 Identities = 359/569 (63%), Positives = 414/569 (72%), Gaps = 9/569 (1%)
 Frame = +2

Query: 77   SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKI-RNXXXXX 253
            SLISQ  LRK  V + K+E+ D P  L+ +E NE  KE     L++KKRKK  +      
Sbjct: 2    SLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQL 60

Query: 254  XXXXXXXXXXXXXXLFGSLYSPNEFGKEEESGNEVKGPYSDPLLFFTDRTANGVVTVXXX 433
                          LFGSLY P EFGK  E   + K    D  LFFTDR+AN  ++    
Sbjct: 61   EVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAE-KDSTLFFTDRSANSALSFYEE 119

Query: 434  XXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGS---DRL 604
                    +   +   +KP W D EE+   I+I KVNR+RKL+ EEDE+ I GS    RL
Sbjct: 120  DAEFPEESSGEEDTKQRKPVWVDEEEEKTNINISKVNRLRKLRKEEDESLISGSVYVSRL 179

Query: 605  RAYHVKTNPPPKWAQRGS-----GPIHDDESDEEYGALVDQAVEDNQENKSILRTNEDLV 769
            RA H K NP  +WAQ  S        + + SDEE GA++    +D +    ILRTNEDLV
Sbjct: 180  RAQHAKLNPGTEWAQLDSWSRTYSSDYGESSDEENGAVIAPGHKDVEAVDDILRTNEDLV 239

Query: 770  VKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDGKR 949
            VKS  KLLPG+LEYSRLVDANAEDPSN  INSVQFH N              FFQ+DG+R
Sbjct: 240  VKSGTKLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRR 299

Query: 950  NTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLE 1129
            NT IQSIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYSFDL  AK D+IGPL+GREEKSLE
Sbjct: 300  NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLE 359

Query: 1130 VFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGH 1309
             F+VSPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDGH
Sbjct: 360  AFEVSPDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGH 419

Query: 1310 IYHWDLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRKPM 1489
            IYHWDLRTRTCFHK  DEGCI G+AL  SP+GALFAAGS+SGIVN+YN+EEFLGGKRKPM
Sbjct: 420  IYHWDLRTRTCFHKGTDEGCINGTALCASPSGALFAAGSASGIVNVYNKEEFLGGKRKPM 479

Query: 1490 KTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPRCL 1669
            KTIEN+TT+VD++KFN+DAQILAI S+M+KNSLKL+H+PS+TVFSNWPPP +TLH+PRCL
Sbjct: 480  KTIENVTTKVDFMKFNNDAQILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCL 539

Query: 1670 DFSPGGGFMATGNADGKVFLYKLHHYQHA 1756
            DFSPGGGFMA G+A GKV LYKLHHYQHA
Sbjct: 540  DFSPGGGFMAVGSAAGKVLLYKLHHYQHA 568


>emb|CBI17936.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  670 bits (1728), Expect = 0.0
 Identities = 357/564 (63%), Positives = 409/564 (72%), Gaps = 4/564 (0%)
 Frame = +2

Query: 77   SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKI-RNXXXXX 253
            SLISQ  LRK  V + K+E+ D P  L+ +E NE  KE     L++KKRKK  +      
Sbjct: 39   SLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQL 97

Query: 254  XXXXXXXXXXXXXXLFGSLYSPNEFGKEEESGNEVKGPYSDPLLFFTDRTANGVVTVXXX 433
                          LFGSLY P EFGK  E   + K    D  LFFTDR+AN  ++    
Sbjct: 98   EVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAE-KDSTLFFTDRSANSALSFYEE 156

Query: 434  XXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGS---DRL 604
                    +   +   +KP W D EE+   I+I KVNR+RKL+ EEDE+ I GS    RL
Sbjct: 157  DAEFPEESSGEEDTKQRKPVWVDEEEEKTNINISKVNRLRKLRKEEDESLISGSVYVSRL 216

Query: 605  RAYHVKTNPPPKWAQRGSGPIHDDESDEEYGALVDQAVEDNQENKSILRTNEDLVVKSRV 784
            RA H K NP  +WAQ  S          +YG    +AV+D      ILRTNEDLVVKS  
Sbjct: 217  RAQHAKLNPGTEWAQLDSW---SRTYSSDYGHKDVEAVDD------ILRTNEDLVVKSGT 267

Query: 785  KLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDGKRNTMIQ 964
            KLLPG+LEYSRLVDANAEDPSN  INSVQFH N              FFQ+DG+RNT IQ
Sbjct: 268  KLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRRNTKIQ 327

Query: 965  SIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLEVFDVS 1144
            SIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYSFDL  AK D+IGPL+GREEKSLE F+VS
Sbjct: 328  SIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLEAFEVS 387

Query: 1145 PDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGHIYHWD 1324
            PDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDGHIYHWD
Sbjct: 388  PDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGHIYHWD 447

Query: 1325 LRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRKPMKTIEN 1504
            LRTRTCFHK  DEGCI G+AL  SP+GALFAAGS+SGIVN+YN+EEFLGGKRKPMKTIEN
Sbjct: 448  LRTRTCFHKGTDEGCINGTALCASPSGALFAAGSASGIVNVYNKEEFLGGKRKPMKTIEN 507

Query: 1505 LTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPRCLDFSPG 1684
            +TT+VD++KFN+DAQILAI S+M+KNSLKL+H+PS+TVFSNWPPP +TLH+PRCLDFSPG
Sbjct: 508  VTTKVDFMKFNNDAQILAISSSMKKNSLKLIHIPSYTVFSNWPPPNRTLHYPRCLDFSPG 567

Query: 1685 GGFMATGNADGKVFLYKLHHYQHA 1756
            GGFMA G+A GKV LYKLHHYQHA
Sbjct: 568  GGFMAVGSAAGKVLLYKLHHYQHA 591


>ref|XP_002520985.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223539822|gb|EEF41402.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 566

 Score =  640 bits (1652), Expect = 0.0
 Identities = 340/571 (59%), Positives = 406/571 (71%), Gaps = 11/571 (1%)
 Frame = +2

Query: 77   SLISQKALRKKPVYELKQEENDEPLSLQESEKN-EVAKESSLVGLKSKKRKKIRNXXXXX 253
            SLISQ    K  V + K+EE D P  ++ +E+N E  ++S L   ++KKR+  R      
Sbjct: 2    SLISQNVGSKNRV-KTKKEETDGPAFMEGNEENNEDGRDSELAMSRAKKRR--REKEEQL 58

Query: 254  XXXXXXXXXXXXXXLFGSLYSPNEFGKEEE--SGNEVKGPYSDPLLFFTDRTANGVVTVX 427
                          LFGSLYSP EFG +EE  + +EV+   +   LFF DR+A+  + V 
Sbjct: 59   EVDEGKEMKRLENFLFGSLYSPIEFGNDEEEKAHDEVE---NGSALFFVDRSASTELCVY 115

Query: 428  XXXXXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGSD--- 598
                      +   E   +KP W D EE    IDI   NR+RKL+ E+ E  I G +   
Sbjct: 116  KEESEVLEKSDVDEEPRQRKPVWVDEEEAKTTIDIAHTNRLRKLRKEDSENLISGREYVA 175

Query: 599  RLRAYHVKTNPPPKWAQ-----RGSGPIHDDESDEEYGALVDQAVEDNQENKSILRTNED 763
            RLRA+H K NP  +WA+     R +G   D+ SDEE G +  +  E  +    + RTNED
Sbjct: 176  RLRAHHAKLNPGTEWARLDLQSRNNGSYDDESSDEENGIVTARGYEVAETFDDVFRTNED 235

Query: 764  LVVKSRVKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDG 943
            LVVKSR KLLPGILEYSRLVDANA++ SN  INSVQFHRN              FFQ+DG
Sbjct: 236  LVVKSRKKLLPGILEYSRLVDANAQEASNGPINSVQFHRNAQLLLAAGLDRRLRFFQIDG 295

Query: 944  KRNTMIQSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKS 1123
            KRNT IQSIF++DCPIRKA+FLPDGSQVI+ GRRKFFYSFDL +AK D+IGPLVGREEKS
Sbjct: 296  KRNTKIQSIFIDDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVNAKVDKIGPLVGREEKS 355

Query: 1124 LEVFDVSPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGD 1303
            LE F+VSPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+AR+LAF+ +G+QLLS GGD
Sbjct: 356  LEFFEVSPDSSTIAFVGNEGYILLVSSKTKELIGTLKMNGTARALAFSGNGQQLLSHGGD 415

Query: 1304 GHIYHWDLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRK 1483
            G +YHWDLRTRTC HKA+DEGCI G+AL  SPNG+LFAAGS  GIVN+YN E FLGG RK
Sbjct: 416  GQVYHWDLRTRTCIHKAVDEGCINGTALSASPNGSLFAAGSDVGIVNVYNNELFLGGNRK 475

Query: 1484 PMKTIENLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPR 1663
            P+KTI+NLTT+VD++KF++DAQILAICS M+KNSLKL+H+PS+TVFSNWPP   TLH PR
Sbjct: 476  PIKTIDNLTTKVDFMKFSNDAQILAICSHMKKNSLKLIHLPSYTVFSNWPPGNTTLHFPR 535

Query: 1664 CLDFSPGGGFMATGNADGKVFLYKLHHYQHA 1756
            CLDFSPGGGFMA GNA GKV LYKLHHYQHA
Sbjct: 536  CLDFSPGGGFMAVGNAAGKVLLYKLHHYQHA 566


>ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Cucumis sativus] gi|449521663|ref|XP_004167849.1|
            PREDICTED: U3 small nucleolar RNA-associated protein 18
            homolog [Cucumis sativus]
          Length = 564

 Score =  637 bits (1642), Expect = e-180
 Identities = 335/565 (59%), Positives = 393/565 (69%), Gaps = 5/565 (0%)
 Frame = +2

Query: 77   SLISQKALRKKPVYELKQEENDEPLSLQESEKNEVAKESSLVGLKSKKRKKIRNXXXXXX 256
            SLISQ       + ++ +E    P S   +       +S L   ++KKRKK         
Sbjct: 2    SLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQL 61

Query: 257  XXXXXXXXXXXXXLFGSLYSPNEFGKEEESGNEVKGPYSDPLLFFTDRTANGVVTVXXXX 436
                         LFGSLYSP EFGK+EE  N        P L+  DR+A+  ++     
Sbjct: 62   VKEQKEMMKLENFLFGSLYSPVEFGKDEEQ-NGFNSEEKTPALYIMDRSADHSLSAYEDD 120

Query: 437  XXXXXXXNNLVECIDKKPAWEDPEEKTIRIDIEKVNRMRKLKTEEDETSICGSD---RLR 607
                    N  E   +KP W D EE+   ++I  V+R+RKL+ EE E SI GS+   RLR
Sbjct: 121  YGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRLR 180

Query: 608  AYHVKTNPPPKWAQRGSGPIHDDE--SDEEYGALVDQAVEDNQENKSILRTNEDLVVKSR 781
            A H K NP  +WAQ  +    DD+  SD+E    +    ++      ILRT+E LVVKS 
Sbjct: 181  AQHAKINPGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSG 240

Query: 782  VKLLPGILEYSRLVDANAEDPSNSAINSVQFHRNXXXXXXXXXXXXXXFFQVDGKRNTMI 961
             KL+PG+L YSRLVDANAE+PSN  INSVQFHRN              FFQ+DGKRNT I
Sbjct: 241  GKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKI 300

Query: 962  QSIFLEDCPIRKATFLPDGSQVIVGGRRKFFYSFDLAHAKFDRIGPLVGREEKSLEVFDV 1141
            QSIFLEDCPIRKA+FLPDGSQVI+ GRRKFFYS DL  AK D+IGPLVGREEKSLE F++
Sbjct: 301  QSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEI 360

Query: 1142 SPDSRTIAFLGNEGYILLVSCKTKELIGTLKMNGSARSLAFTDDGRQLLSSGGDGHIYHW 1321
            SPDS TIAF+GNEGYILLVS KTKELIGTLKMNG+ RSLAF DDGRQLLSSGGDG IYHW
Sbjct: 361  SPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHW 420

Query: 1322 DLRTRTCFHKAIDEGCIMGSALRTSPNGALFAAGSSSGIVNIYNREEFLGGKRKPMKTIE 1501
            DLRTRTC HKA+DEGCI G+AL TSPNG LFAAGS+SGIVNIYNR+EFLGGK+KP+K IE
Sbjct: 421  DLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPLKAIE 479

Query: 1502 NLTTRVDYLKFNHDAQILAICSTMQKNSLKLVHMPSFTVFSNWPPPKQTLHHPRCLDFSP 1681
            NLTT+VD+LKFNHDAQILAICS M+++SLKL+H+PSFT+FSNWPPPK+ L +P CLDFSP
Sbjct: 480  NLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCLDFSP 539

Query: 1682 GGGFMATGNADGKVFLYKLHHYQHA 1756
             GG+MA GNA GKV LYKLHHY HA
Sbjct: 540  EGGYMAVGNAAGKVLLYKLHHYHHA 564


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