BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003034
         (1882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   345   2e-92
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]   343   9e-92
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   319   1e-84
ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   318   3e-84
ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   315   2e-83

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  345 bits (886), Expect = 2e-92
 Identities = 192/343 (55%), Positives = 215/343 (62%)
 Frame = -1

Query: 1705 MGSNSSHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDSSQP 1526
            M S +S+WC+ C+RFVR+   DS  IVC  C+ GF+EEIE  P              S+ 
Sbjct: 3    MASTTSYWCHRCTRFVRVWAQDS--IVCPYCESGFLEEIEATP-------------RSEN 47

Query: 1525 RRRRFPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGASDXX 1346
              RRFP                                       PFNPVIVLRG +D  
Sbjct: 48   HHRRFPATAMYMLGNNRPDSEQSANLGLRRSRRNAGDRS------PFNPVIVLRGPADGG 101

Query: 1345 XXXNVERERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEINGVGGNGR 1166
                   ER SFELYYDDGAGSGL+PLPA+MS+FLMGSGFDRLL+QL+QIEING G   R
Sbjct: 102  GGEGGVVERSSFELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFG---R 158

Query: 1165 CEHPPASKAAIESMPTIEIVGPHIMMDSHCAVCKEAFELGTDAREMPCKHIYHSDCILPW 986
             EHPPASKAA+ESMPTIEIV  HI+ + HCAVCKEAF+LG++AREMPCKHIYHSDCILPW
Sbjct: 159  GEHPPASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPW 218

Query: 985  LSLRNSCPVCRHELPSAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVGLTIWRL 806
            LSLRNSCPVCRHELP    TDV   R  +SPVS      NE  SP   E++ VGLTIWRL
Sbjct: 219  LSLRNSCPVCRHELP----TDVPGTR--NSPVSG-----NEALSPAPNEEETVGLTIWRL 267

Query: 805  PXXXXXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
            P                ERELPVVYTEMDG FNN GAPRRISW
Sbjct: 268  PGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRISW 310


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score =  343 bits (880), Expect = 9e-92
 Identities = 191/343 (55%), Positives = 214/343 (62%)
 Frame = -1

Query: 1705 MGSNSSHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDSSQP 1526
            M S +S+WC+ C+RFVR+   DS  IVC  C+ GF+EEIE  P              S+ 
Sbjct: 113  MASTTSYWCHRCTRFVRVWAQDS--IVCPYCESGFLEEIEATP-------------RSEN 157

Query: 1525 RRRRFPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGASDXX 1346
              RRFP                                       PFNPVIVLRG +D  
Sbjct: 158  HHRRFPATAMYMLGNNRPDSEQSANLGLRRSRRNAGDRS------PFNPVIVLRGPADGG 211

Query: 1345 XXXNVERERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEINGVGGNGR 1166
                   ER SFELYYDDGAGSGL+PLPA+MS+FLMGSGFDRLL+QL+QIEING G   R
Sbjct: 212  GGEGGVVERSSFELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFG---R 268

Query: 1165 CEHPPASKAAIESMPTIEIVGPHIMMDSHCAVCKEAFELGTDAREMPCKHIYHSDCILPW 986
             EHPPASKAA+ESMPTIEIV  HI+ + HCAVCKEAF+LG++AREMPCKHIYHSDCILPW
Sbjct: 269  GEHPPASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPW 328

Query: 985  LSLRNSCPVCRHELPSAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVGLTIWRL 806
            LSLRNSCPVCRHELP    TDV   R  +SPVS       E  SP   E++ VGLTIWRL
Sbjct: 329  LSLRNSCPVCRHELP----TDVPGTR--NSPVSG-----TEALSPAPNEEETVGLTIWRL 377

Query: 805  PXXXXXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
            P                ERELPVVYTEMDG FNN GAPRRISW
Sbjct: 378  PGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRISW 420


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  319 bits (818), Expect = 1e-84
 Identities = 178/339 (52%), Positives = 204/339 (60%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1690 SHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDSSQPRR-RR 1514
            S+WCYSC+RFVR+   D+  IVC +C GGF+EEIE                  QPRR  R
Sbjct: 2    SYWCYSCNRFVRVWSHDA--IVCPDCDGGFLEEIEE-----------------QPRRPHR 42

Query: 1513 FPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGASDXXXXXN 1334
            FP                                       PFNPVIV+RG +D      
Sbjct: 43   FPAAAMYMIENRPNSAQNSHSAVRRIRRGRGDRS-------PFNPVIVMRGTADEGGGEG 95

Query: 1333 VERERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEINGVGGNGRCEHP 1154
               +RG+F+LYYDDG GSGL+PLPAS+S+FL+GSGFDRLL+QL+Q+EING+G   R E P
Sbjct: 96   --GDRGAFDLYYDDGGGSGLRPLPASVSEFLLGSGFDRLLEQLSQMEINGIG---RYEQP 150

Query: 1153 PASKAAIESMPTIEIVGPHIMMDSHCAVCKEAFELGTDAREMPCKHIYHSDCILPWLSLR 974
            PASKAAIE+MPTIEI   H+  + HCAVCKE FELG +AREMPCKHIYHSDCILPWLSLR
Sbjct: 151  PASKAAIEAMPTIEIADAHVNTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLR 210

Query: 973  NSCPVCRHELPSAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVGLTIWRLPXXX 794
            NSCPVCRHELPS            +SP S+  T E           + VGLTIWRLP   
Sbjct: 211  NSCPVCRHELPS---------EERNSPESNEQTPE-----------ETVGLTIWRLPGGG 250

Query: 793  XXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
                         ERELPVVYTEMDG FNNGGAPRRISW
Sbjct: 251  FAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISW 289


>ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2 [Vitis
            vinifera]
          Length = 365

 Score =  318 bits (815), Expect = 3e-84
 Identities = 177/343 (51%), Positives = 204/343 (59%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1699 SNSSHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDSSQPRR 1520
            S SS WCY C+RF+R+   D+  I+C +C  GFVE+I N               S  PRR
Sbjct: 5    SGSSFWCYRCNRFIRVWAQDA--ILCPDCGSGFVEQINNL--------------SRSPRR 48

Query: 1519 RRFPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGASDXXXX 1340
            RR P                                        FNPVIVLRG++D    
Sbjct: 49   RRLPGSAMYLENRNALDQDPVPRIRRARRSGGDRSL--------FNPVIVLRGSADVNGS 100

Query: 1339 XN--VERERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEINGVGGNGR 1166
                   ERG+FELYYDDG GSGL+PLPAS+S+FLMGSGFDRLLDQLAQ+EING G   R
Sbjct: 101  EGGGTSGERGNFELYYDDGTGSGLRPLPASVSEFLMGSGFDRLLDQLAQLEINGAG---R 157

Query: 1165 CEHPPASKAAIESMPTIEIVGPHIMMDSHCAVCKEAFELGTDAREMPCKHIYHSDCILPW 986
            CEHPPASKAA+ES+PTI+IV  H++ +SHCAVCKE FEL ++ARE+PCKHIYHSDCILPW
Sbjct: 158  CEHPPASKAAVESLPTIKIVASHVLSESHCAVCKEPFELDSEARELPCKHIYHSDCILPW 217

Query: 985  LSLRNSCPVCRHELPSAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVGLTIWRL 806
            LSLRNSCPVCRHELP    TD           S    +   + SP   E+D VGLTIWRL
Sbjct: 218  LSLRNSCPVCRHELP----TD-----------SHEGGSSGHLQSPGLTEEDNVGLTIWRL 262

Query: 805  PXXXXXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
            P               AERELPVV+TEMDG FN  GA RR  W
Sbjct: 263  PGGGFAVGRFTGGRQAAERELPVVFTEMDGGFNPSGASRRNPW 305


>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score =  315 bits (808), Expect = 2e-83
 Identities = 175/346 (50%), Positives = 208/346 (60%)
 Frame = -1

Query: 1714 MDSMGSNSSHWCYSCSRFVRILESDSSSIVCSNCQGGFVEEIENPPPTRSITTTRNDLDS 1535
            M SM + SS+WC+ CS FVR+  S+  S+VC +C  GFVE+IE+P    ++         
Sbjct: 1    MSSMAAASSYWCHRCSHFVRV--SNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAP----- 53

Query: 1534 SQPRRRRFPXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGAS 1355
                RRRFP                                       PFNPVIVLRG S
Sbjct: 54   ----RRRFPAAAMYMIGNRSNSGQNLGSGLRRSRRNGGDRS-------PFNPVIVLRGPS 102

Query: 1354 DXXXXXNVERERGSFELYYDDGAGSGLQPLPASMSDFLMGSGFDRLLDQLAQIEINGVGG 1175
            D        R    FELYYDDG GSGL+PLP SMS+FL+GSGFDRLL+QL+QIE+NG+G 
Sbjct: 103  DGSEAGESRR----FELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIG- 157

Query: 1174 NGRCEHPPASKAAIESMPTIEIVGPHIMMDSHCAVCKEAFELGTDAREMPCKHIYHSDCI 995
              R E+PPASKAAIESMPTI+I   ++  +SHCAVCKEAFELGT+AREMPCKHIYH DCI
Sbjct: 158  --RFENPPASKAAIESMPTIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCI 215

Query: 994  LPWLSLRNSCPVCRHELPSAVTTDVGNVRTGSSPVSDGSTTENEIPSPVQAEDDAVGLTI 815
            LPWLS+RNSCPVCRHELPS     +    +G    + GS T N         ++ VGLTI
Sbjct: 216  LPWLSIRNSCPVCRHELPSDNQNSLDAAESGE---NGGSVTSN--------GEENVGLTI 264

Query: 814  WRLPXXXXXXXXXXXXXXXAERELPVVYTEMDGDFNNGGAPRRISW 677
            WRLP                ERELPVVYTE+DG F NGG PRR+S+
Sbjct: 265  WRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFTNGGLPRRVSF 310