BLASTX nr result
ID: Coptis21_contig00003025
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003025
(2358 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001059867.1| Os07g0535100 [Oryza sativa Japonica Group] g... 80 2e-12
tpg|DAA56575.1| TPA: hypothetical protein ZEAMMB73_557228 [Zea m... 80 2e-12
gb|EEE67319.1| hypothetical protein OsJ_24565 [Oryza sativa Japo... 80 2e-12
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g... 79 4e-12
dbj|BAJ96122.1| predicted protein [Hordeum vulgare subsp. vulgare] 79 5e-12
>ref|NP_001059867.1| Os07g0535100 [Oryza sativa Japonica Group]
gi|22831058|dbj|BAC15921.1| unknown protein [Oryza sativa
Japonica Group] gi|50508288|dbj|BAD32137.1| unknown
protein [Oryza sativa Japonica Group]
gi|113611403|dbj|BAF21781.1| Os07g0535100 [Oryza sativa
Japonica Group] gi|215704833|dbj|BAG94861.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 377
Score = 80.1 bits (196), Expect = 2e-12
Identities = 90/376 (23%), Positives = 151/376 (40%), Gaps = 18/376 (4%)
Frame = -1
Query: 2013 IAEILIRVPPKTLFSSKCVCKNWHGLISDQTFITRYIRRSKSVPLPPLITGYYYEKRICN 1834
+ EIL R+P +++ K VC++W LI+D R LP ++G++Y+ +
Sbjct: 20 VVEILRRLPVRSVCRFKRVCRSWRNLIAD---------REHRKKLPQTLSGFFYKSS--S 68
Query: 1833 GSKTEVSFYETGSSTDDNGQLIGVDTXXXXXXXLKLPSIYVVDSHSGFVLCA----EKLN 1666
G + S + + + LI + ++ +D +G +LC N
Sbjct: 69 GERCPCSAHHFTNVSGKGVPLI----YPSFSFLPQCDTVVPLDCCNGLLLCRCFQPGPNN 124
Query: 1665 LGDVLVPYYFRYIICNPLTKEWKYLPEPARSHSIRQIVLYCYDDETEFSFRRIKFKVFCF 1486
D + P F Y +CNP TKEW LP+ ++ +I C+D F V +
Sbjct: 125 SDDEIEP--FHYAVCNPATKEWVMLPDADWANGETRIACLCFDPAISSHFH-----VLEY 177
Query: 1485 ITWEVNELV-VDIYCSELGQWKKSTMAHGLNGSCPLNRKTLSNGSVYFWNQSHLCRC--- 1318
+ E ++ V+IY SE G W T+ G R + SV+ H C
Sbjct: 178 VEAEYEDVTGVEIYSSETGLW---TLHVSGWGDDVFLRHWANPRSVFLNGFLHSATCAAE 234
Query: 1317 ----DLETEDIHVMELPSISGYWRSGRIGVSSGSLCFFETTRT---QFRIWILG--DKVG 1165
D+E + + +P G +G I + G LC F + IWIL D
Sbjct: 235 IAVVDMEGKKWRTIAMPEPEG--DTGIIHQTQGRLCAFNVDPDDIFKLSIWILEDYDTDN 292
Query: 1164 WSLKHFIDGEILRKEFPGI-LKCGDLFRALAFHSQNDEFPVGIIGGVRVFIYRMNSRRVE 988
W LKH + L F G+ + G ++ +A H + + + Y M+ + V
Sbjct: 293 WILKHTVSSLRL---FGGMKYRFGFDYQIIAVHPECNLIFFVYGWDKTLMAYEMDRKEVR 349
Query: 987 LVNESISTLYSPFIPY 940
+ + P++PY
Sbjct: 350 AIRNLGHDSFEPYLPY 365
>tpg|DAA56575.1| TPA: hypothetical protein ZEAMMB73_557228 [Zea mays]
Length = 358
Score = 80.1 bits (196), Expect = 2e-12
Identities = 86/357 (24%), Positives = 139/357 (38%), Gaps = 15/357 (4%)
Frame = -1
Query: 2013 IAEILIRVPPKTLFSSKCVCKNWHGLISDQTFITRYIRRSKSVPLPPLITGYYYEKRICN 1834
+ EIL R+P ++L +CV +W +IS Y+RR LP + +G Y C
Sbjct: 10 LTEILARLPCRSLARFQCVSTSWRRIISSD-----YLRRR----LPLITSGVLYHDDTCR 60
Query: 1833 GS-----KTEVSFYETGSSTDDNGQLIGVDTXXXXXXXLKLPSIYVVDSHSGFVLCAEKL 1669
G + +V Y S + + ++D +G +L
Sbjct: 61 GGADGGRRQQVYTYACASGGGATATATATAEAPDMGFFPRHDTSTIIDGCNGLLL----- 115
Query: 1668 NLGDVLVPYYFR-----YIICNPLTKEWKYLPEPARSHSIRQIVLY--CYDDETEFSFRR 1510
YY + + NP T+ W LP P R+ ++ ++ + C
Sbjct: 116 --------YYASRPTAAFHVVNPTTRRWAELPAP-RARTLLSVLAFDPCASP-------- 158
Query: 1509 IKFKVFCFITWEVNELVVDIYCSELGQWKKSTMAHGLNGSCPLNRKTLSNGSVYFWNQS- 1333
+++V CF W ++++ SE G W + GL+ S G+++ S
Sbjct: 159 -RYRVVCFTGWLPRGATLEVFDSERGAWTDHEVDFGLDTDAMSATMHYSGGALHVLAYSG 217
Query: 1332 HLCRCDLETEDIHVMELPSISGYWRSGRIGVSSGSLCFFETTRTQFRIWILGDKVG--WS 1159
H+ R DL+T ELP+ R G G L F + + RIW L D G W+
Sbjct: 218 HVVRVDLDTMASAATELPAPVSC--RARAGHCRGRLRFASSDGARLRIWELRDATGGEWA 275
Query: 1158 LKHFIDGEILRKEFPGILKCGDLFRALAFHSQNDEFPVGIIGGVRVFIYRMNSRRVE 988
LKH I + PG F +AFH + + V + ++ + M RRVE
Sbjct: 276 LKHEIG---VADVVPGAASQPITFLFMAFHPERE--VVYLWSPWKLLAFDMVQRRVE 327
>gb|EEE67319.1| hypothetical protein OsJ_24565 [Oryza sativa Japonica Group]
Length = 377
Score = 80.1 bits (196), Expect = 2e-12
Identities = 90/376 (23%), Positives = 151/376 (40%), Gaps = 18/376 (4%)
Frame = -1
Query: 2013 IAEILIRVPPKTLFSSKCVCKNWHGLISDQTFITRYIRRSKSVPLPPLITGYYYEKRICN 1834
+ EIL R+P +++ K VC++W LI+D R LP ++G++Y+ +
Sbjct: 20 VVEILRRLPVRSVCRFKRVCRSWRNLIAD---------REHRKKLPQTLSGFFYKS--IS 68
Query: 1833 GSKTEVSFYETGSSTDDNGQLIGVDTXXXXXXXLKLPSIYVVDSHSGFVLCA----EKLN 1666
G + S + + + LI + ++ +D +G +LC N
Sbjct: 69 GERCPCSAHHFTNVSGKGVPLI----YPSFSFLPQCDTVVPLDCCNGLLLCRCFQPGPNN 124
Query: 1665 LGDVLVPYYFRYIICNPLTKEWKYLPEPARSHSIRQIVLYCYDDETEFSFRRIKFKVFCF 1486
D + P F Y +CNP TKEW LP+ ++ +I C+D F V +
Sbjct: 125 SDDEIEP--FHYAVCNPATKEWVMLPDADWANGETRIACLCFDPAISSHFH-----VLEY 177
Query: 1485 ITWEVNELV-VDIYCSELGQWKKSTMAHGLNGSCPLNRKTLSNGSVYFWNQSHLCRC--- 1318
+ E ++ V+IY SE G W T+ G R + SV+ H C
Sbjct: 178 VEAEYEDVTGVEIYSSETGLW---TLHVSGWGDDVFLRHWANPRSVFLNGFLHSATCAAE 234
Query: 1317 ----DLETEDIHVMELPSISGYWRSGRIGVSSGSLCFFETTRT---QFRIWILG--DKVG 1165
D+E + + +P G +G I + G LC F + IWIL D
Sbjct: 235 IAVVDMEGKKWRTIAMPEPEG--DTGIIHQTQGRLCAFNVDPDDIFKLSIWILEDYDTDN 292
Query: 1164 WSLKHFIDGEILRKEFPGI-LKCGDLFRALAFHSQNDEFPVGIIGGVRVFIYRMNSRRVE 988
W LKH + L F G+ + G ++ +A H + + + Y M+ + V
Sbjct: 293 WILKHTVSSLRL---FGGMKYRFGFDYQIIAVHPECNLIFFVYGWDKTLMAYEMDRKEVR 349
Query: 987 LVNESISTLYSPFIPY 940
+ + P++PY
Sbjct: 350 AIRNLGHDSFEPYLPY 365
>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
gi|222864409|gb|EEF01540.1| f-box family protein [Populus
trichocarpa]
Length = 406
Score = 79.3 bits (194), Expect = 4e-12
Identities = 79/316 (25%), Positives = 133/316 (42%), Gaps = 14/316 (4%)
Frame = -1
Query: 2007 EILIRVPPKTLFSSKCVCKNWHGLISDQTFITRYIRRSKSVPLPPLITGYYYEKRICNGS 1828
EIL R+P K+L SKCVC+ W+ LISD FI+ Y RR+ ++G++ +K +
Sbjct: 41 EILHRLPLKSLLISKCVCRLWNHLISDPIFISNYSRRNPQ----HHVSGFFLQKFLFLEQ 96
Query: 1827 KTEVSFYETGSSTDDNGQLIGVDTXXXXXXXLKLPSIYVVDSHSGFVLCAEKLNLGDVLV 1648
+++ F D + PS+ ++ G +C + G +L
Sbjct: 97 YSKLEFITCEGQDDAAPE----------------PSLCFIEDDQG--VCIQHSCNGLLLC 138
Query: 1647 PYY------FRYIICNPLTKEWKYLPEPARSHSIRQIVLYCYDDETEFSFRRIKFKVFCF 1486
+ +Y IC P TK++ LP+P I + YD +K+ C
Sbjct: 139 SSFRCHEDDRKYYICKPTTKQYHQLPKP--GCKIVFGINIAYDPTIS-----PHYKIICV 191
Query: 1485 ITWEVNELVVDIYCSELGQWKKSTMAHGLNGSCPLNRKTLSNGSVYFWNQSHLC-RCDLE 1309
+ + +Y S +G W+ S + NR N ++++ ++ L R D+E
Sbjct: 192 ----CDSNAIKMYDSAIGSWRVSGNHQVFSHVLLFNRGVFLNRALHWISRGALALRFDIE 247
Query: 1308 TEDIHVMELPSI---SGYWRSGRIGVSSGSLCFFE---TTRTQFRIWIL-GDKVGWSLKH 1150
E + M +P I R G G S G LC E T F + + D GWS+++
Sbjct: 248 QERMLTMPMPPIPEGRSERRLGYFGESGGHLCLIEIYGPITTCFDVMRMESDYSGWSVRY 307
Query: 1149 FIDGEILRKEFPGILK 1102
+D + FP + +
Sbjct: 308 RVDLSRIASSFPSMAR 323
>dbj|BAJ96122.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 357
Score = 79.0 bits (193), Expect = 5e-12
Identities = 88/353 (24%), Positives = 146/353 (41%), Gaps = 11/353 (3%)
Frame = -1
Query: 2013 IAEILIRVPPKTLFSSKCVCKNWHGLISDQTFITRYIRRSKSVPLPPLITGYYYE--KRI 1840
+AEIL+R+P K+L +CV W GLIS Y+RR LP + +G + R
Sbjct: 10 LAEILVRLPHKSLARFQCVSTTWRGLIS-----ADYLRRR----LPLITSGVLFNDGPRD 60
Query: 1839 CNGSKTEVSFYET-GSSTDDNGQLIGVDTXXXXXXXLKLPSIYVVDSHSGFVLCAEKLNL 1663
G + ++ SS +D G+ GV + ++D +G +L
Sbjct: 61 GEGGRRAYTYARALSSSGEDGGEGGGVAEADDMAFFPCHATSSIIDGCNGLLL------- 113
Query: 1662 GDVLVPYYFRYIICNPLTKEWKYLPEPARSHSIRQIVLY--CYDDETEFSFRRIKFKVFC 1489
Y + + NP T+ W LP P R ++ ++ + C +KV C
Sbjct: 114 --YYASYPAAFHVVNPTTRRWAALPAPRRK-TLLSVLSFDPCASPH---------YKVVC 161
Query: 1488 FITWEVNELVVDIYCSELGQWKKSTMAHGLNGSCPLNRKTLSNGSVYFWNQS-HLCRCDL 1312
F W V+++ SE G W + + GL+ +G+V+ S H+ R DL
Sbjct: 162 FTGWLPRGASVEVFDSEPGAWGEHELDFGLDTDAMSATMHCFDGAVHVLAYSGHVVRIDL 221
Query: 1311 ETEDIHVMELPSISGYWRSGRIGVSSGSLCFFETTRTQFRIWILGD--KVGWSLKHFID- 1141
T V LP+ Y R G G L + + ++ +W L D K W++KH +
Sbjct: 222 RTMACTVTALPAPVSY--RARAGHCRGRLRYASSDGSRLTLWELVDAGKSEWTVKHELGV 279
Query: 1140 GEILR--KEFPGILKCGDLFRALAFHSQNDEFPVGIIGGVRVFIYRMNSRRVE 988
G+++ P F +AFH + + V + ++ + M RR+E
Sbjct: 280 GDLVSGGSRHPATA----TFVFMAFHPERE--VVYLWTPSKLIAFNMEQRRIE 326