BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003021
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19935.3| unnamed protein product [Vitis vinifera]              325   1e-91
ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform...   325   1e-91
ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays] gi|195...   316   2e-88
ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like is...   315   2e-88
ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycin...   315   3e-88

>emb|CBI19935.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  325 bits (834), Expect(2) = 1e-91
 Identities = 161/187 (86%), Positives = 170/187 (90%)
 Frame = -1

Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408
           GVGKS+LLL FTS TF+DLSPTIGVDF             LAIWDTAGQERFRTLTSSYY
Sbjct: 121 GVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLKLAIWDTAGQERFRTLTSSYY 180

Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228
           RGAQGVIMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SERVVTKKEG
Sbjct: 181 RGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVTKKEG 240

Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48
           IDFAR+YGCLFLECSAKT+VNVEQCFEELVLKIL+TPSLLAEGS GV+KNIF QKPPE+D
Sbjct: 241 IDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEGSSGVRKNIFKQKPPESD 300

Query: 47  ASTSGCC 27
           ASTSGCC
Sbjct: 301 ASTSGCC 307



 Score = 38.1 bits (87), Expect(2) = 1e-91
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -2

Query: 718 SQPEFDYLFKLLLIGDS 668
           SQPEFDYLFKLLLIGDS
Sbjct: 104 SQPEFDYLFKLLLIGDS 120


>ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera]
           gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related
           protein RABC1 [Vitis vinifera]
          Length = 211

 Score =  325 bits (834), Expect(2) = 1e-91
 Identities = 161/187 (86%), Positives = 170/187 (90%)
 Frame = -1

Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408
           GVGKS+LLL FTS TF+DLSPTIGVDF             LAIWDTAGQERFRTLTSSYY
Sbjct: 25  GVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLKLAIWDTAGQERFRTLTSSYY 84

Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228
           RGAQGVIMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SERVVTKKEG
Sbjct: 85  RGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVTKKEG 144

Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48
           IDFAR+YGCLFLECSAKT+VNVEQCFEELVLKIL+TPSLLAEGS GV+KNIF QKPPE+D
Sbjct: 145 IDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEGSSGVRKNIFKQKPPESD 204

Query: 47  ASTSGCC 27
           ASTSGCC
Sbjct: 205 ASTSGCC 211



 Score = 38.1 bits (87), Expect(2) = 1e-91
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -2

Query: 718 SQPEFDYLFKLLLIGDS 668
           SQPEFDYLFKLLLIGDS
Sbjct: 8   SQPEFDYLFKLLLIGDS 24


>ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays] gi|195625924|gb|ACG34792.1|
           ras-related protein Rab-18 [Zea mays]
           gi|223972897|gb|ACN30636.1| unknown [Zea mays]
           gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea
           mays]
          Length = 215

 Score =  316 bits (809), Expect(2) = 2e-88
 Identities = 155/187 (82%), Positives = 166/187 (88%)
 Frame = -1

Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408
           GVGKSSLLLRFT+++F+DLSPTIGVDF             LAIWDTAGQERFRTLTSSYY
Sbjct: 29  GVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAIWDTAGQERFRTLTSSYY 88

Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228
           RGAQGVIMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SER VTKKEG
Sbjct: 89  RGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVTKKEG 148

Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48
           I+FAR+YGCLFLECSAKT+VNVEQCFEELVLKILDTPSLLA+ S G KKNIF QKPPE D
Sbjct: 149 IEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADASSGAKKNIFKQKPPEAD 208

Query: 47  ASTSGCC 27
           A+ S CC
Sbjct: 209 AAASSCC 215



 Score = 37.4 bits (85), Expect(2) = 2e-88
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 724 MDSQPEFDYLFKLLLIGDS 668
           +  QPEFDYLFKLLLIGDS
Sbjct: 10  LSQQPEFDYLFKLLLIGDS 28


>ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
           sativus] gi|449458103|ref|XP_004146787.1| PREDICTED:
           ras-related protein RABC1-like isoform 2 [Cucumis
           sativus] gi|449529576|ref|XP_004171774.1| PREDICTED:
           ras-related protein RABC1-like isoform 1 [Cucumis
           sativus] gi|449529578|ref|XP_004171775.1| PREDICTED:
           ras-related protein RABC1-like isoform 2 [Cucumis
           sativus]
          Length = 213

 Score =  315 bits (807), Expect(2) = 2e-88
 Identities = 153/187 (81%), Positives = 167/187 (89%)
 Frame = -1

Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408
           GVGKS+LLLRFTS++F+DLSPTIGVDF             LAIWDTAGQERFRTLT SYY
Sbjct: 25  GVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKLAIWDTAGQERFRTLTGSYY 84

Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228
           RGAQG+IMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SERVV+KKEG
Sbjct: 85  RGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVSKKEG 144

Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48
           IDFAR+YGCLFLECSAKT+VNVEQCF+ELVLKILDTPSLLA+GS G+KKNIF +KPPET 
Sbjct: 145 IDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGLKKNIFKEKPPETT 204

Query: 47  ASTSGCC 27
            S  GCC
Sbjct: 205 TSAGGCC 211



 Score = 38.1 bits (87), Expect(2) = 2e-88
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -2

Query: 718 SQPEFDYLFKLLLIGDS 668
           SQPEFDYLFKLLLIGDS
Sbjct: 8   SQPEFDYLFKLLLIGDS 24


>ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycine max]
           gi|255626443|gb|ACU13566.1| unknown [Glycine max]
          Length = 215

 Score =  315 bits (808), Expect(2) = 3e-88
 Identities = 153/187 (81%), Positives = 169/187 (90%)
 Frame = -1

Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408
           GVGKS+LLL FTS+TF+DLSPTIGVDF             LAIWDTAGQERFRTLTSSYY
Sbjct: 27  GVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGKKSKLAIWDTAGQERFRTLTSSYY 86

Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228
           RGAQG+IMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SERVV+KKEG
Sbjct: 87  RGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVSKKEG 146

Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48
           IDFAR+YGCL+ ECSAKT+VNV QCF+ELV+KIL+TPSLLAEGS GVKKNIF QKPP++D
Sbjct: 147 IDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETPSLLAEGSSGVKKNIFKQKPPQSD 206

Query: 47  ASTSGCC 27
           AS+SGCC
Sbjct: 207 ASSSGCC 213



 Score = 37.0 bits (84), Expect(2) = 3e-88
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = -2

Query: 718 SQPEFDYLFKLLLIGDS 668
           +QPEFDYLFKLLLIGDS
Sbjct: 10  TQPEFDYLFKLLLIGDS 26