BLASTX nr result
ID: Coptis21_contig00003021
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003021 (863 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19935.3| unnamed protein product [Vitis vinifera] 325 1e-91 ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform... 325 1e-91 ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays] gi|195... 316 2e-88 ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like is... 315 2e-88 ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycin... 315 3e-88 >emb|CBI19935.3| unnamed protein product [Vitis vinifera] Length = 307 Score = 325 bits (834), Expect(2) = 1e-91 Identities = 161/187 (86%), Positives = 170/187 (90%) Frame = -1 Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408 GVGKS+LLL FTS TF+DLSPTIGVDF LAIWDTAGQERFRTLTSSYY Sbjct: 121 GVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLKLAIWDTAGQERFRTLTSSYY 180 Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228 RGAQGVIMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SERVVTKKEG Sbjct: 181 RGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVTKKEG 240 Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48 IDFAR+YGCLFLECSAKT+VNVEQCFEELVLKIL+TPSLLAEGS GV+KNIF QKPPE+D Sbjct: 241 IDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEGSSGVRKNIFKQKPPESD 300 Query: 47 ASTSGCC 27 ASTSGCC Sbjct: 301 ASTSGCC 307 Score = 38.1 bits (87), Expect(2) = 1e-91 Identities = 17/17 (100%), Positives = 17/17 (100%) Frame = -2 Query: 718 SQPEFDYLFKLLLIGDS 668 SQPEFDYLFKLLLIGDS Sbjct: 104 SQPEFDYLFKLLLIGDS 120 >ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera] gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related protein RABC1 [Vitis vinifera] Length = 211 Score = 325 bits (834), Expect(2) = 1e-91 Identities = 161/187 (86%), Positives = 170/187 (90%) Frame = -1 Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408 GVGKS+LLL FTS TF+DLSPTIGVDF LAIWDTAGQERFRTLTSSYY Sbjct: 25 GVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLKLAIWDTAGQERFRTLTSSYY 84 Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228 RGAQGVIMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SERVVTKKEG Sbjct: 85 RGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVTKKEG 144 Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48 IDFAR+YGCLFLECSAKT+VNVEQCFEELVLKIL+TPSLLAEGS GV+KNIF QKPPE+D Sbjct: 145 IDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEGSSGVRKNIFKQKPPESD 204 Query: 47 ASTSGCC 27 ASTSGCC Sbjct: 205 ASTSGCC 211 Score = 38.1 bits (87), Expect(2) = 1e-91 Identities = 17/17 (100%), Positives = 17/17 (100%) Frame = -2 Query: 718 SQPEFDYLFKLLLIGDS 668 SQPEFDYLFKLLLIGDS Sbjct: 8 SQPEFDYLFKLLLIGDS 24 >ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays] gi|195625924|gb|ACG34792.1| ras-related protein Rab-18 [Zea mays] gi|223972897|gb|ACN30636.1| unknown [Zea mays] gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea mays] Length = 215 Score = 316 bits (809), Expect(2) = 2e-88 Identities = 155/187 (82%), Positives = 166/187 (88%) Frame = -1 Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408 GVGKSSLLLRFT+++F+DLSPTIGVDF LAIWDTAGQERFRTLTSSYY Sbjct: 29 GVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAIWDTAGQERFRTLTSSYY 88 Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228 RGAQGVIMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SER VTKKEG Sbjct: 89 RGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVTKKEG 148 Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48 I+FAR+YGCLFLECSAKT+VNVEQCFEELVLKILDTPSLLA+ S G KKNIF QKPPE D Sbjct: 149 IEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADASSGAKKNIFKQKPPEAD 208 Query: 47 ASTSGCC 27 A+ S CC Sbjct: 209 AAASSCC 215 Score = 37.4 bits (85), Expect(2) = 2e-88 Identities = 16/19 (84%), Positives = 17/19 (89%) Frame = -2 Query: 724 MDSQPEFDYLFKLLLIGDS 668 + QPEFDYLFKLLLIGDS Sbjct: 10 LSQQPEFDYLFKLLLIGDS 28 >ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis sativus] gi|449458103|ref|XP_004146787.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis sativus] gi|449529576|ref|XP_004171774.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis sativus] gi|449529578|ref|XP_004171775.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis sativus] Length = 213 Score = 315 bits (807), Expect(2) = 2e-88 Identities = 153/187 (81%), Positives = 167/187 (89%) Frame = -1 Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408 GVGKS+LLLRFTS++F+DLSPTIGVDF LAIWDTAGQERFRTLT SYY Sbjct: 25 GVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKLAIWDTAGQERFRTLTGSYY 84 Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228 RGAQG+IMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SERVV+KKEG Sbjct: 85 RGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVSKKEG 144 Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48 IDFAR+YGCLFLECSAKT+VNVEQCF+ELVLKILDTPSLLA+GS G+KKNIF +KPPET Sbjct: 145 IDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGLKKNIFKEKPPETT 204 Query: 47 ASTSGCC 27 S GCC Sbjct: 205 TSAGGCC 211 Score = 38.1 bits (87), Expect(2) = 2e-88 Identities = 17/17 (100%), Positives = 17/17 (100%) Frame = -2 Query: 718 SQPEFDYLFKLLLIGDS 668 SQPEFDYLFKLLLIGDS Sbjct: 8 SQPEFDYLFKLLLIGDS 24 >ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycine max] gi|255626443|gb|ACU13566.1| unknown [Glycine max] Length = 215 Score = 315 bits (808), Expect(2) = 3e-88 Identities = 153/187 (81%), Positives = 169/187 (90%) Frame = -1 Query: 587 GVGKSSLLLRFTSETFDDLSPTIGVDFXXXXXXXXXXXXXLAIWDTAGQERFRTLTSSYY 408 GVGKS+LLL FTS+TF+DLSPTIGVDF LAIWDTAGQERFRTLTSSYY Sbjct: 27 GVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGKKSKLAIWDTAGQERFRTLTSSYY 86 Query: 407 RGAQGVIMVYDVTRRETFTNLSDIWAKEVDLYSTNQDCIKMLVGNKVDKDSERVVTKKEG 228 RGAQG+IMVYDVTRRETFTNLSDIWAKE+DLYSTNQDCIKMLVGNKVDK+SERVV+KKEG Sbjct: 87 RGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVSKKEG 146 Query: 227 IDFARQYGCLFLECSAKTQVNVEQCFEELVLKILDTPSLLAEGSKGVKKNIFNQKPPETD 48 IDFAR+YGCL+ ECSAKT+VNV QCF+ELV+KIL+TPSLLAEGS GVKKNIF QKPP++D Sbjct: 147 IDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETPSLLAEGSSGVKKNIFKQKPPQSD 206 Query: 47 ASTSGCC 27 AS+SGCC Sbjct: 207 ASSSGCC 213 Score = 37.0 bits (84), Expect(2) = 3e-88 Identities = 16/17 (94%), Positives = 17/17 (100%) Frame = -2 Query: 718 SQPEFDYLFKLLLIGDS 668 +QPEFDYLFKLLLIGDS Sbjct: 10 TQPEFDYLFKLLLIGDS 26