BLASTX nr result

ID: Coptis21_contig00003016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003016
         (1453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267008.1| PREDICTED: ethylene-responsive transcription...   296   7e-78
gb|ADC94859.1| ERF2 transcription factor [Vitis pseudoreticulata]     292   2e-76
gb|ADE41148.1| AP2 domain class transcription factor [Malus x do...   285   2e-74
gb|ADE41104.1| AP2 domain class transcription factor [Malus x do...   285   3e-74
gb|ADU76351.1| ethylene responsive factor, partial [Prunus persica]   280   9e-73

>ref|XP_002267008.1| PREDICTED: ethylene-responsive transcription factor RAP2-12-like
            [Vitis vinifera]
          Length = 379

 Score =  296 bits (759), Expect = 7e-78
 Identities = 157/315 (49%), Positives = 197/315 (62%), Gaps = 7/315 (2%)
 Frame = -1

Query: 1354 FAALKNVAFNGYVEKSAKRKRKNQYRRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXX 1175
            +  +K+V FNG  EKSAKRKRKNQYR GIRQRPWGKWAAEIRDPRKGVRVWLGTFNT   
Sbjct: 84   YTGIKSVEFNGQAEKSAKRKRKNQYR-GIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 142

Query: 1174 XXXXXXXXXXRIRGNKAKVNFPEHK--NSPARAVKA-----LPTGNHTLERPVFNQDFSL 1016
                      RIRG KAKVNFP+     +P R +KA     +P G+        NQ F+ 
Sbjct: 143  AARAYDAEARRIRGKKAKVNFPDETPLTAPKRTIKANAQKLIPKGSPNSSHSNLNQSFNF 202

Query: 1015 MNYSSDDSLGFVEEKPPLMGSEFFASMKXXXXXXXXXXXXXXXXXXXXXXXXXQSFTPAD 836
            MN S  +    + ++ P      +                             +S  P++
Sbjct: 203  MNNSDQEYYSSLMDEKPSTNQYGYPDS-----------------FPANGEVGLKSLAPSE 245

Query: 835  GGTLCFTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEEANPSKKQKT 656
             G + F SDQGSNS +CSD GWG Q  KTPEI+SVLS  +E +E ++F+E+ANP KK K+
Sbjct: 246  NGRMYFNSDQGSNSFDCSDLGWGEQGAKTPEISSVLSATLEGDE-SQFIEDANPKKKLKS 304

Query: 655  NSEMAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGGSSLD 476
            NS+ AVPVE NT   L E+LSAFESQMK+ QIPYL+G+W+ SMD+L SGD   +GG+ +D
Sbjct: 305  NSQNAVPVEENTPNGLSEDLSAFESQMKYFQIPYLDGNWEASMDALLSGDAAQDGGNPMD 364

Query: 475  LWSFDDVPQMVGGIF 431
            LWSFDD+P +VGG+F
Sbjct: 365  LWSFDDLPTVVGGVF 379


>gb|ADC94859.1| ERF2 transcription factor [Vitis pseudoreticulata]
          Length = 376

 Score =  292 bits (747), Expect = 2e-76
 Identities = 157/312 (50%), Positives = 193/312 (61%), Gaps = 7/312 (2%)
 Frame = -1

Query: 1345 LKNVAFNGYVEKSAKRKRKNQYRRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXX 1166
            +K+V FNG  EKSAKRKRKNQYR GIRQRPWGKWAAEIRDPRKGVRVWLGTFNT      
Sbjct: 84   IKSVEFNGQAEKSAKRKRKNQYR-GIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 142

Query: 1165 XXXXXXXRIRGNKAKVNFPEHK--NSPARAVKA-----LPTGNHTLERPVFNQDFSLMNY 1007
                   RIRG KAKVNFP+     +P R +KA     +P G+        NQ F+ MN 
Sbjct: 143  AYDAEARRIRGKKAKVNFPDETPLTAPKRTIKANAQKLIPKGSPNPSHSNLNQSFNFMNN 202

Query: 1006 SSDDSLGFVEEKPPLMGSEFFASMKXXXXXXXXXXXXXXXXXXXXXXXXXQSFTPADGGT 827
            S  +    + ++ P      +                             +S  P++ G 
Sbjct: 203  SDQEYYSSLMDEKPSTNQHGYPDS-----------------FPANGEVGLKSLAPSENGR 245

Query: 826  LCFTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEEANPSKKQKTNSE 647
            + F SDQGSNS +CSD GWG Q  KTPEI+SVLS  +E +E   F+E+A+P KK K+NS+
Sbjct: 246  MYFNSDQGSNSFDCSDLGWGEQGAKTPEISSVLSATLEGDESL-FIEDASPKKKLKSNSQ 304

Query: 646  MAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGGSSLDLWS 467
             AVPVE NT   L E+LSAFESQMK+ QIPYL+GSW+ SMD L SGD   +GG+ +DLWS
Sbjct: 305  NAVPVEENTPNGLFEDLSAFESQMKYFQIPYLDGSWEASMDPLLSGDAAQDGGNPMDLWS 364

Query: 466  FDDVPQMVGGIF 431
            FDD+P +VGG+F
Sbjct: 365  FDDLPTVVGGVF 376


>gb|ADE41148.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 386

 Score =  285 bits (730), Expect = 2e-74
 Identities = 156/318 (49%), Positives = 203/318 (63%), Gaps = 12/318 (3%)
 Frame = -1

Query: 1348 ALKNVAFNGYVEKSAKRKRKNQYRRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXX 1169
            A+K+V F+G  EKSAKRKRKNQYR GIRQRPWGKWAAEIRDPRKGVRVWLGTFNT     
Sbjct: 92   AVKSVEFDGQAEKSAKRKRKNQYR-GIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAA 150

Query: 1168 XXXXXXXXRIRGNKAKVNFPEHKN--SPARAVKALPTG-------NHTLERPVFNQDFSL 1016
                    RIRG KAKVNFPE     S  R++K  P         N T   P  NQ+F+ 
Sbjct: 151  RAYDAEARRIRGKKAKVNFPEETPCASAKRSIKENPQKLIAKTNLNGTQSNP--NQNFNF 208

Query: 1015 MNYSSDD---SLGFVEEKPPLMGSEFFASMKXXXXXXXXXXXXXXXXXXXXXXXXXQSFT 845
            +N SS+D   +LGF++EKP +    + ++                           +S  
Sbjct: 209  VNDSSEDYYSALGFLDEKPTMNNFRYMSTFPANEDVAL------------------KSSV 250

Query: 844  PADGGTLCFTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEEANPSKK 665
            P++     F+SDQGSNS +CSDFGWG Q  KTPEI+SV+S+V+E ++++ F+E++NP+KK
Sbjct: 251  PSENAPFYFSSDQGSNSFDCSDFGWGEQGSKTPEISSVISSVMEESDNSPFLEDSNPTKK 310

Query: 664  QKTNSEMAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGGS 485
             K NS+   P E N+ K L +ELSAFE  MK+ Q PYL+ SWD S+D+  +GD T +GG+
Sbjct: 311  MKPNSQDLEPPEDNSGKTLSDELSAFE--MKYFQTPYLDESWDASVDAFLNGDATQDGGN 368

Query: 484  SLDLWSFDDVPQMVGGIF 431
             +DLWSFDD+P +VGG+F
Sbjct: 369  PMDLWSFDDLPAIVGGVF 386


>gb|ADE41104.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 387

 Score =  285 bits (728), Expect = 3e-74
 Identities = 160/316 (50%), Positives = 199/316 (62%), Gaps = 10/316 (3%)
 Frame = -1

Query: 1348 ALKNVAFNGYVEKSAKRKRKNQYRRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXX 1169
            A+K+V FNG  EKSAKRKRKNQYR GIRQRPWGKWAAEIRDPRKGVRVWLGTFNT     
Sbjct: 93   AVKSVEFNGQAEKSAKRKRKNQYR-GIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAA 151

Query: 1168 XXXXXXXXRIRGNKAKVNFPEH--KNSPARAVKA-----LPTGNHTLERPVFNQDFSLMN 1010
                    RIRG KAKVNFPE   + S  R+VKA     +P  N        NQ+F+ +N
Sbjct: 152  RAYDAEARRIRGKKAKVNFPEETPRASAKRSVKANSQKLIPKTNVNGTESNLNQNFNFVN 211

Query: 1009 YSSDD---SLGFVEEKPPLMGSEFFASMKXXXXXXXXXXXXXXXXXXXXXXXXXQSFTPA 839
             SS D   +LGF++EKP L    + ++                           +S TP+
Sbjct: 212  DSSQDYYSALGFLDEKPTLNNFGYMSTF------------------LANGDVALKSSTPS 253

Query: 838  DGGTLCFTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEEANPSKKQK 659
            D      +SDQGSNS +CSDFGWG Q  KTPEI+SVLS+V+E  + + F+E+ANP+KK K
Sbjct: 254  DPAPFYLSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSSVMEETDDSLFLEDANPTKKLK 313

Query: 658  TNSEMAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGGSSL 479
             NS+  V  + N  K L +ELSAFE  MK+ Q PYL+GSWD S+D+  +GD T +GG+  
Sbjct: 314  PNSQDLVLPQDNAGKTLSDELSAFE--MKYFQTPYLDGSWDASVDAFLNGDATQDGGNPG 371

Query: 478  DLWSFDDVPQMVGGIF 431
            DLW+FDD+P +VGG F
Sbjct: 372  DLWTFDDLPAIVGGTF 387


>gb|ADU76351.1| ethylene responsive factor, partial [Prunus persica]
          Length = 382

 Score =  280 bits (715), Expect = 9e-73
 Identities = 158/315 (50%), Positives = 199/315 (63%), Gaps = 10/315 (3%)
 Frame = -1

Query: 1345 LKNVAFNGYVEKSAKRKRKNQYRRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTXXXXXX 1166
            +K V FNG  EKSAKRKRKNQYR GIRQRPWGKWAAEIRDPRKGVRVWLGTFNT      
Sbjct: 92   VKLVEFNGQAEKSAKRKRKNQYR-GIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 150

Query: 1165 XXXXXXXRIRGNKAKVNFPEH--KNSPARAVKA-----LPTGNHTLERPVFNQDFSLMNY 1007
                   RIRG KAKVNFP+   ++S  R+VKA     LP  N    +P  NQ+ + +N 
Sbjct: 151  AYDSEARRIRGKKAKVNFPDETPRSSAKRSVKANPQKMLPKTNTNAVQPNLNQNINFVND 210

Query: 1006 SSDD---SLGFVEEKPPLMGSEFFASMKXXXXXXXXXXXXXXXXXXXXXXXXXQSFTPAD 836
             + D   ++GF++EKP      F ++                           +S TP+D
Sbjct: 211  PNQDYYNAMGFLDEKPATNNFGFMSTFPANEDVAL------------------KSSTPSD 252

Query: 835  GGTLCFTSDQGSNSLNCSDFGWGNQEPKTPEITSVLSTVIESNEHAEFMEEANPSKKQKT 656
               L F+SDQGSNS +CSDFGWG Q  KTPEI+SVLS V+E ++ + F+E+A+P+KK K+
Sbjct: 253  AVPLYFSSDQGSNSFDCSDFGWGEQGSKTPEISSVLSCVMEESDDSLFLEDASPTKKLKS 312

Query: 655  NSEMAVPVEGNTAKNLCEELSAFESQMKFLQIPYLEGSWDGSMDSLFSGDTTLNGGSSLD 476
            N E  VPV+ N  K L +ELSAFE  MK+ Q PYL+GSWD S+D+  S D T +GG+S+D
Sbjct: 313  NPEDLVPVQDNAGKTLTDELSAFE--MKYFQTPYLDGSWDASVDAFLSTDATQDGGNSVD 370

Query: 475  LWSFDDVPQMVGGIF 431
             WSFDD   ++GG F
Sbjct: 371  FWSFDD---LIGGGF 382


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