BLASTX nr result
ID: Coptis21_contig00003010
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003010 (440 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003618085.1| Coproporphyrinogen-III oxidase [Medicago tru... 55 2e-16 ref|XP_002990281.1| hypothetical protein SELMODRAFT_131328 [Sela... 55 9e-16 ref|XP_002518396.1| coproporphyrinogen III oxidase, putative [Ri... 52 1e-15 ref|XP_002892163.1| coproporphyrinogen III oxidase [Arabidopsis ... 53 1e-15 ref|NP_171847.4| Coproporphyrinogen III oxidase [Arabidopsis tha... 53 1e-15 >ref|XP_003618085.1| Coproporphyrinogen-III oxidase [Medicago truncatula] gi|355519420|gb|AET01044.1| Coproporphyrinogen-III oxidase [Medicago truncatula] Length = 399 Score = 55.1 bits (131), Expect(3) = 2e-16 Identities = 28/41 (68%), Positives = 32/41 (78%) Frame = -2 Query: 439 GGISRVL**GGVWEKVGVINVSFIYGEMPPEACRVAKGDAS 317 GGISRVL G VWEK GV NVS +YG+MPP+A R AKG A+ Sbjct: 130 GGISRVLQDGAVWEKAGV-NVSVVYGQMPPDAYRAAKGAAA 169 Score = 51.6 bits (122), Expect(3) = 2e-16 Identities = 22/25 (88%), Positives = 22/25 (88%) Frame = -1 Query: 173 VFHQKNLFAPTLHFNYRYFETDAPK 99 V H KN FAPTLHFNYRYFETDAPK Sbjct: 189 VLHPKNPFAPTLHFNYRYFETDAPK 213 Score = 23.5 bits (49), Expect(3) = 2e-16 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = -3 Query: 318 PFFAAGISSV 289 PFFAAGISSV Sbjct: 180 PFFAAGISSV 189 >ref|XP_002990281.1| hypothetical protein SELMODRAFT_131328 [Selaginella moellendorffii] gi|300141990|gb|EFJ08696.1| hypothetical protein SELMODRAFT_131328 [Selaginella moellendorffii] Length = 301 Score = 55.5 bits (132), Expect(3) = 9e-16 Identities = 28/42 (66%), Positives = 31/42 (73%) Frame = -2 Query: 439 GGISRVL**GGVWEKVGVINVSFIYGEMPPEACRVAKGDASL 314 GG+SRVL G VWEK GV NVS +YG MPPEA R AK D S+ Sbjct: 33 GGVSRVLQDGNVWEKAGV-NVSVVYGTMPPEAYRAAKADTSV 73 Score = 48.9 bits (115), Expect(3) = 9e-16 Identities = 20/25 (80%), Positives = 21/25 (84%) Frame = -1 Query: 173 VFHQKNLFAPTLHFNYRYFETDAPK 99 V H KN FAPT+HFNYRYFETD PK Sbjct: 91 VMHPKNPFAPTVHFNYRYFETDTPK 115 Score = 23.5 bits (49), Expect(3) = 9e-16 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = -3 Query: 318 PFFAAGISSV 289 PFFAAGISSV Sbjct: 82 PFFAAGISSV 91 >ref|XP_002518396.1| coproporphyrinogen III oxidase, putative [Ricinus communis] gi|223542241|gb|EEF43783.1| coproporphyrinogen III oxidase, putative [Ricinus communis] Length = 393 Score = 52.4 bits (124), Expect(3) = 1e-15 Identities = 28/41 (68%), Positives = 30/41 (73%) Frame = -2 Query: 439 GGISRVL**GGVWEKVGVINVSFIYGEMPPEACRVAKGDAS 317 GGISRVL G VWEK GV NVS +YG MPPEA R AK +S Sbjct: 127 GGISRVLQDGAVWEKAGV-NVSVVYGVMPPEAYRAAKAASS 166 Score = 51.6 bits (122), Expect(3) = 1e-15 Identities = 22/25 (88%), Positives = 22/25 (88%) Frame = -1 Query: 173 VFHQKNLFAPTLHFNYRYFETDAPK 99 V H KN FAPTLHFNYRYFETDAPK Sbjct: 183 VLHPKNPFAPTLHFNYRYFETDAPK 207 Score = 23.5 bits (49), Expect(3) = 1e-15 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = -3 Query: 318 PFFAAGISSV 289 PFFAAGISSV Sbjct: 174 PFFAAGISSV 183 >ref|XP_002892163.1| coproporphyrinogen III oxidase [Arabidopsis lyrata subsp. lyrata] gi|297338005|gb|EFH68422.1| coproporphyrinogen III oxidase [Arabidopsis lyrata subsp. lyrata] Length = 387 Score = 52.8 bits (125), Expect(3) = 1e-15 Identities = 29/41 (70%), Positives = 31/41 (75%) Frame = -2 Query: 439 GGISRVL**GGVWEKVGVINVSFIYGEMPPEACRVAKGDAS 317 GGISRVL G V+EK GV NVS +YG MPPEA R AKG AS Sbjct: 121 GGISRVLQDGNVFEKAGV-NVSVVYGVMPPEAYRAAKGSAS 160 Score = 51.6 bits (122), Expect(3) = 1e-15 Identities = 22/25 (88%), Positives = 22/25 (88%) Frame = -1 Query: 173 VFHQKNLFAPTLHFNYRYFETDAPK 99 V H KN FAPTLHFNYRYFETDAPK Sbjct: 177 VLHPKNPFAPTLHFNYRYFETDAPK 201 Score = 23.1 bits (48), Expect(3) = 1e-15 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -3 Query: 318 PFFAAGISSV 289 PFFAAG+SSV Sbjct: 168 PFFAAGVSSV 177 >ref|NP_171847.4| Coproporphyrinogen III oxidase [Arabidopsis thaliana] gi|13431553|sp|Q9LR75.1|HEM6_ARATH RecName: Full=Coproporphyrinogen-III oxidase, chloroplastic; Short=Coprogen oxidase; Short=Coproporphyrinogenase; AltName: Full=Protein LESION INITIATION 2; Flags: Precursor gi|9280667|gb|AAF86536.1|AC002560_29 F21B7.10 [Arabidopsis thaliana] gi|14624992|dbj|BAB61876.1| coproporphyrinogen III oxidase [Arabidopsis thaliana] gi|17221413|emb|CAD12661.1| coproporphyrinogen III oxidase [Arabidopsis thaliana] gi|332189456|gb|AEE27577.1| Coproporphyrinogen III oxidase [Arabidopsis thaliana] Length = 386 Score = 52.8 bits (125), Expect(3) = 1e-15 Identities = 29/41 (70%), Positives = 31/41 (75%) Frame = -2 Query: 439 GGISRVL**GGVWEKVGVINVSFIYGEMPPEACRVAKGDAS 317 GGISRVL G V+EK GV NVS +YG MPPEA R AKG AS Sbjct: 120 GGISRVLQDGNVFEKAGV-NVSVVYGVMPPEAYRAAKGSAS 159 Score = 51.6 bits (122), Expect(3) = 1e-15 Identities = 22/25 (88%), Positives = 22/25 (88%) Frame = -1 Query: 173 VFHQKNLFAPTLHFNYRYFETDAPK 99 V H KN FAPTLHFNYRYFETDAPK Sbjct: 176 VLHPKNPFAPTLHFNYRYFETDAPK 200 Score = 23.1 bits (48), Expect(3) = 1e-15 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -3 Query: 318 PFFAAGISSV 289 PFFAAG+SSV Sbjct: 167 PFFAAGVSSV 176