BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003005
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16928.3| unnamed protein product [Vitis vinifera]              416   e-114
ref|XP_002281689.1| PREDICTED: 60S ribosomal protein L7a [Vitis ...   416   e-114
ref|NP_001061550.1| Os08g0326400 [Oryza sativa Japonica Group] g...   414   e-113
ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|1946...   414   e-113
ref|XP_003519707.1| PREDICTED: pentatricopeptide repeat-containi...   414   e-113

>emb|CBI16928.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  416 bits (1070), Expect = e-114
 Identities = 209/241 (86%), Positives = 218/241 (90%)
 Frame = -1

Query: 1012 EKVTNPLFEKRSKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 833
            EKV NPLFEKR KQFGIGGALPPKKDL RFVKWP                 VPPALNQFT
Sbjct: 97   EKVVNPLFEKRPKQFGIGGALPPKKDLTRFVKWPHVVRIQRKRRILRQRLKVPPALNQFT 156

Query: 832  KTLDKNLATNLFKMLLKYRPEDKTAKKERLLKRAQAEAEGKTVESKKPIVVKYGLNHITY 653
            KTLDKNLATNLFKMLLKYRPEDK AKKERLLKRAQAEAEGKT ESKKPIVVKYGLNHITY
Sbjct: 157  KTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTAESKKPIVVKYGLNHITY 216

Query: 652  LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYAIVKGKARLGSIVHKKTASVLCLT 473
            LIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYAIVKGK+RLG+IVHKKTA+ LCLT
Sbjct: 217  LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYAIVKGKSRLGAIVHKKTATALCLT 276

Query: 472  SVKNEDKMEFSKIVEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLIAKEAAQRM 293
            SVKNEDK+EFSKIVEA+KANFNDKYDEYRK+WGGGIMGSKSQAKTKAKE+LIAKEAAQRM
Sbjct: 277  SVKNEDKLEFSKIVEAVKANFNDKYDEYRKRWGGGIMGSKSQAKTKAKEKLIAKEAAQRM 336

Query: 292  N 290
            +
Sbjct: 337  S 337


>ref|XP_002281689.1| PREDICTED: 60S ribosomal protein L7a [Vitis vinifera]
            gi|147858681|emb|CAN81023.1| hypothetical protein
            VITISV_030542 [Vitis vinifera]
          Length = 258

 Score =  416 bits (1070), Expect = e-114
 Identities = 209/241 (86%), Positives = 218/241 (90%)
 Frame = -1

Query: 1012 EKVTNPLFEKRSKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 833
            EKV NPLFEKR KQFGIGGALPPKKDL RFVKWP                 VPPALNQFT
Sbjct: 18   EKVVNPLFEKRPKQFGIGGALPPKKDLTRFVKWPHVVRIQRKRRILRQRLKVPPALNQFT 77

Query: 832  KTLDKNLATNLFKMLLKYRPEDKTAKKERLLKRAQAEAEGKTVESKKPIVVKYGLNHITY 653
            KTLDKNLATNLFKMLLKYRPEDK AKKERLLKRAQAEAEGKT ESKKPIVVKYGLNHITY
Sbjct: 78   KTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTAESKKPIVVKYGLNHITY 137

Query: 652  LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYAIVKGKARLGSIVHKKTASVLCLT 473
            LIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYAIVKGK+RLG+IVHKKTA+ LCLT
Sbjct: 138  LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYAIVKGKSRLGAIVHKKTATALCLT 197

Query: 472  SVKNEDKMEFSKIVEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLIAKEAAQRM 293
            SVKNEDK+EFSKIVEA+KANFNDKYDEYRK+WGGGIMGSKSQAKTKAKE+LIAKEAAQRM
Sbjct: 198  SVKNEDKLEFSKIVEAVKANFNDKYDEYRKRWGGGIMGSKSQAKTKAKEKLIAKEAAQRM 257

Query: 292  N 290
            +
Sbjct: 258  S 258


>ref|NP_001061550.1| Os08g0326400 [Oryza sativa Japonica Group]
            gi|115480049|ref|NP_001063618.1| Os09g0507800 [Oryza
            sativa Japonica Group] gi|548774|sp|P35685.1|RL7A_ORYSJ
            RecName: Full=60S ribosomal protein L7a
            gi|315113253|pdb|3IZR|H Chain H, Localization Of The
            Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map
            Of Triticum Aestivum Translating 80s Ribosome
            gi|303855|dbj|BAA02156.1| ribosomal protein L7A [Oryza
            sativa Japonica Group] gi|38423963|dbj|BAD01672.1| 60S
            ribosomal protein L7A [Oryza sativa Japonica Group]
            gi|38637005|dbj|BAD03264.1| 60S ribosomal protein L7A
            [Oryza sativa Japonica Group]
            gi|113623519|dbj|BAF23464.1| Os08g0326400 [Oryza sativa
            Japonica Group] gi|113631851|dbj|BAF25532.1| Os09g0507800
            [Oryza sativa Japonica Group] gi|125564310|gb|EAZ09690.1|
            hypothetical protein OsI_31973 [Oryza sativa Indica
            Group] gi|125606274|gb|EAZ45310.1| hypothetical protein
            OsJ_29953 [Oryza sativa Japonica Group]
            gi|215692651|dbj|BAG88071.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215692800|dbj|BAG88244.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215768136|dbj|BAH00365.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218200951|gb|EEC83378.1|
            hypothetical protein OsI_28791 [Oryza sativa Indica
            Group]
          Length = 258

 Score =  414 bits (1065), Expect = e-113
 Identities = 206/240 (85%), Positives = 219/240 (91%)
 Frame = -1

Query: 1012 EKVTNPLFEKRSKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 833
            EKVTNPLFEKR KQFGIGGALPPKKDLHRFVKWP                 VPPALNQFT
Sbjct: 18   EKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFT 77

Query: 832  KTLDKNLATNLFKMLLKYRPEDKTAKKERLLKRAQAEAEGKTVESKKPIVVKYGLNHITY 653
            +TLDKNLATNLFKMLLKYRPEDK AKKERLLKRAQAEAEGKTVE+KKPIVVKYGLNH+TY
Sbjct: 78   RTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTY 137

Query: 652  LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYAIVKGKARLGSIVHKKTASVLCLT 473
            LIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PY IVKGKARLGSIVHKKTASVLCLT
Sbjct: 138  LIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLT 197

Query: 472  SVKNEDKMEFSKIVEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLIAKEAAQRM 293
            +VKNEDK+EFSKI+EAIKANFNDK+DE RKKWGGG+MGSKSQAKTKA+E+L+AKEAAQRM
Sbjct: 198  TVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRM 257


>ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|194699752|gb|ACF83960.1|
            unknown [Zea mays] gi|195607614|gb|ACG25637.1| 60S
            ribosomal protein L7a [Zea mays]
            gi|414589924|tpg|DAA40495.1| TPA: 60S ribosomal protein
            L7a [Zea mays]
          Length = 258

 Score =  414 bits (1065), Expect = e-113
 Identities = 207/240 (86%), Positives = 218/240 (90%)
 Frame = -1

Query: 1012 EKVTNPLFEKRSKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 833
            +KVTNPLFEKR KQFGIGGALPPKKDLHRFVKWP                 VPPALNQFT
Sbjct: 18   DKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFT 77

Query: 832  KTLDKNLATNLFKMLLKYRPEDKTAKKERLLKRAQAEAEGKTVESKKPIVVKYGLNHITY 653
            +TLDKNLATNLFKMLLKYRPEDK AKKERLLKRAQAE EGKTVESKKPIVVKYGLNH+TY
Sbjct: 78   RTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAENEGKTVESKKPIVVKYGLNHVTY 137

Query: 652  LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYAIVKGKARLGSIVHKKTASVLCLT 473
            LIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PY IVKGKARLGSIVHKKTASVLCLT
Sbjct: 138  LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLT 197

Query: 472  SVKNEDKMEFSKIVEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLIAKEAAQRM 293
            +VKNEDK+EFSKI+EAIKANFNDK+DE RKKWGGGIMGSKSQAKTKA+E+L+AKEAAQRM
Sbjct: 198  TVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGIMGSKSQAKTKAREKLLAKEAAQRM 257


>ref|XP_003519707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Glycine max]
          Length = 554

 Score =  414 bits (1063), Expect = e-113
 Identities = 207/241 (85%), Positives = 218/241 (90%)
 Frame = -1

Query: 1012 EKVTNPLFEKRSKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXVPPALNQFT 833
            EKVTNPLFEKR KQFGIGGALPPK+DL RFVKWP                 VPPALNQFT
Sbjct: 314  EKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKNVQIQRKKRILKQRLKVPPALNQFT 373

Query: 832  KTLDKNLATNLFKMLLKYRPEDKTAKKERLLKRAQAEAEGKTVESKKPIVVKYGLNHITY 653
            KTLDKNLATNLFKMLLKYRPEDK  KKERLLKRAQAEA+GK VE+KKPIVVKYGLNH+TY
Sbjct: 374  KTLDKNLATNLFKMLLKYRPEDKAEKKERLLKRAQAEADGKPVEAKKPIVVKYGLNHVTY 433

Query: 652  LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYAIVKGKARLGSIVHKKTASVLCLT 473
            LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPY IVKGKARLG+IVHKKTASVLCLT
Sbjct: 434  LIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTIVHKKTASVLCLT 493

Query: 472  SVKNEDKMEFSKIVEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLIAKEAAQRM 293
            +VKNEDKMEFS+I+EAIKANFNDKYDEYRKKWGGGIMGSKSQAKT+AKE+L+AKEAAQRM
Sbjct: 494  TVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTRAKEKLLAKEAAQRM 553

Query: 292  N 290
            N
Sbjct: 554  N 554