BLASTX nr result

ID: Coptis21_contig00003000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003000
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273352.1| PREDICTED: protein canopy homolog 1 [Vitis v...    82   5e-14
emb|CAN72605.1| hypothetical protein VITISV_021336 [Vitis vinifera]    82   5e-14
ref|XP_003527301.1| PREDICTED: protein canopy homolog 1-like [Gl...    77   3e-12
ref|XP_002306987.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002510701.1| conserved hypothetical protein [Ricinus comm...    70   3e-10

>ref|XP_002273352.1| PREDICTED: protein canopy homolog 1 [Vitis vinifera]
           gi|297745574|emb|CBI40739.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 41/73 (56%), Positives = 45/73 (61%)
 Frame = +3

Query: 3   TRYEWVKVDDWDNLTTDKREARAYSKDISSYCGRXXXXXXXXXXXXIXXXXXXXXXXXXX 182
           TR EWVKVDDWDN+TT+K+EARAYSKDISSYCGR            I             
Sbjct: 96  TRREWVKVDDWDNITTNKQEARAYSKDISSYCGRLLEETEDELADLIKKGSVKTGEVSKV 155

Query: 183 LCQDLSRQCSGTS 221
           LCQDLS+ CS TS
Sbjct: 156 LCQDLSKHCSVTS 168


>emb|CAN72605.1| hypothetical protein VITISV_021336 [Vitis vinifera]
          Length = 200

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 41/73 (56%), Positives = 45/73 (61%)
 Frame = +3

Query: 3   TRYEWVKVDDWDNLTTDKREARAYSKDISSYCGRXXXXXXXXXXXXIXXXXXXXXXXXXX 182
           TR EWVKVDDWDN+TT+K+EARAYSKDISSYCGR            I             
Sbjct: 109 TRREWVKVDDWDNITTNKQEARAYSKDISSYCGRLLEETEDELADLIKKGSVKTGEVSKV 168

Query: 183 LCQDLSRQCSGTS 221
           LCQDLS+ CS TS
Sbjct: 169 LCQDLSKHCSVTS 181


>ref|XP_003527301.1| PREDICTED: protein canopy homolog 1-like [Glycine max]
          Length = 191

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/71 (53%), Positives = 41/71 (57%)
 Frame = +3

Query: 9   YEWVKVDDWDNLTTDKREARAYSKDISSYCGRXXXXXXXXXXXXIXXXXXXXXXXXXXLC 188
           YEW KVD WDNLTT+K+EARAYSKDISSYCGR            I             LC
Sbjct: 105 YEWFKVDSWDNLTTNKQEARAYSKDISSYCGRLLEETEDEFAELIKKGSVKVGGVSKVLC 164

Query: 189 QDLSRQCSGTS 221
           QDLS+ CS  S
Sbjct: 165 QDLSKHCSQMS 175


>ref|XP_002306987.1| predicted protein [Populus trichocarpa] gi|222856436|gb|EEE93983.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 35/72 (48%), Positives = 42/72 (58%)
 Frame = +3

Query: 6   RYEWVKVDDWDNLTTDKREARAYSKDISSYCGRXXXXXXXXXXXXIXXXXXXXXXXXXXL 185
           RYEWV+VD WDNL  +K+EA+AYSKDISSYCGR            I             L
Sbjct: 99  RYEWVRVDSWDNLAINKQEAKAYSKDISSYCGRLLEETEDELAERIKKGSVKVGDVSKIL 158

Query: 186 CQDLSRQCSGTS 221
           CQDLS+ C+ +S
Sbjct: 159 CQDLSKHCNMSS 170


>ref|XP_002510701.1| conserved hypothetical protein [Ricinus communis]
           gi|223551402|gb|EEF52888.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 34/73 (46%), Positives = 42/73 (57%)
 Frame = +3

Query: 3   TRYEWVKVDDWDNLTTDKREARAYSKDISSYCGRXXXXXXXXXXXXIXXXXXXXXXXXXX 182
           TR  WVKVD+WDNLTT+K+EARA+SK +SSYCGR            I             
Sbjct: 99  TRSSWVKVDNWDNLTTNKQEARAFSKALSSYCGRLLEETEDELAELIKKGSVKVGGVSKV 158

Query: 183 LCQDLSRQCSGTS 221
           LC+DLS  C+ +S
Sbjct: 159 LCEDLSNHCTHSS 171


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