BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002998
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO34911.1| hypothetical protein [Amblyomma maculatum]             204   3e-50
emb|CBI40362.3| unnamed protein product [Vitis vinifera]              199   5e-49
ref|XP_003563645.1| PREDICTED: 60S ribosomal protein L36-3-like ...   197   2e-48
ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isofo...   196   4e-48
gb|AFK38454.1| unknown [Lotus japonicus]                              196   5e-48

>gb|AEO34911.1| hypothetical protein [Amblyomma maculatum]
          Length = 110

 Score =  204 bits (518), Expect = 3e-50
 Identities = 100/110 (90%), Positives = 107/110 (97%)
 Frame = +1

Query: 61  MAPPQPKSGLFVGLNKGHVVTRRELAPRPSARKGKTSKRVHFVKNLIREVAGFAPYEKRI 240
           MAPPQP SGL VGLNKGH+VT+RELAPRPS+RKGKTSKR+HFVKNLIREVAGFAPYEKRI
Sbjct: 1   MAPPQPNSGLAVGLNKGHIVTKRELAPRPSSRKGKTSKRIHFVKNLIREVAGFAPYEKRI 60

Query: 241 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRSAGVAEKKK 390
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEM+NVLRKMRSAGV +KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMANVLRKMRSAGVTDKKK 110


>emb|CBI40362.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  199 bits (507), Expect = 5e-49
 Identities = 99/112 (88%), Positives = 106/112 (94%)
 Frame = +1

Query: 55  QVMAPPQPKSGLFVGLNKGHVVTRRELAPRPSARKGKTSKRVHFVKNLIREVAGFAPYEK 234
           QVMAP QP +GLFVGLNKGHVVT++EL PRPS RKGKTSKRVHFV+N+IREVAGFAPYEK
Sbjct: 34  QVMAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEK 93

Query: 235 RITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRSAGVAEKKK 390
           RITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMRS GV EKKK
Sbjct: 94  RITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 145


>ref|XP_003563645.1| PREDICTED: 60S ribosomal protein L36-3-like [Brachypodium
           distachyon]
          Length = 110

 Score =  197 bits (501), Expect = 2e-48
 Identities = 98/110 (89%), Positives = 105/110 (95%)
 Frame = +1

Query: 61  MAPPQPKSGLFVGLNKGHVVTRRELAPRPSARKGKTSKRVHFVKNLIREVAGFAPYEKRI 240
           MAP  PK+GLFVG+NKGHVVT+REL PRPS RKGK +KRVHFV+NLIREVAGFAPYEKRI
Sbjct: 1   MAPATPKTGLFVGINKGHVVTKRELPPRPSDRKGKITKRVHFVRNLIREVAGFAPYEKRI 60

Query: 241 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRSAGVAEKKK 390
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSNVLRKMRSAGVA+KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGVADKKK 110


>ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isoform 2 [Vitis vinifera]
           gi|225464489|ref|XP_002268754.1| PREDICTED: 60S
           ribosomal protein L36-3 isoform 1 [Vitis vinifera]
           gi|302143845|emb|CBI22706.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  196 bits (499), Expect = 4e-48
 Identities = 97/110 (88%), Positives = 104/110 (94%)
 Frame = +1

Query: 61  MAPPQPKSGLFVGLNKGHVVTRRELAPRPSARKGKTSKRVHFVKNLIREVAGFAPYEKRI 240
           MAP QP +GLFVGLNKGH+VT++EL PRPS RKGKTSKRVHFV+NLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 241 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRSAGVAEKKK 390
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMRS GV EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 110


>gb|AFK38454.1| unknown [Lotus japonicus]
          Length = 110

 Score =  196 bits (498), Expect = 5e-48
 Identities = 97/110 (88%), Positives = 104/110 (94%)
 Frame = +1

Query: 61  MAPPQPKSGLFVGLNKGHVVTRRELAPRPSARKGKTSKRVHFVKNLIREVAGFAPYEKRI 240
           MAP QP +GLFVGLNKGHVVT++ELAPRPS RKGKTSKRVHFV++LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRI 60

Query: 241 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRSAGVAEKKK 390
           TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMR+ G  +KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAGGAGDKKK 110