BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002995
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_201477.1| succinate dehydrogenase [ubiquinone] flavoprote...   214   6e-54
ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c...   213   1e-53
ref|XP_003558573.1| PREDICTED: succinate dehydrogenase [ubiquino...   213   2e-53
ref|XP_002866741.1| succinate dehydrogenase 1-1 [Arabidopsis lyr...   213   2e-53
tpg|DAA59498.1| TPA: hypothetical protein ZEAMMB73_792658 [Zea m...   212   3e-53

>ref|NP_201477.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1
           [Arabidopsis thaliana]
           gi|20454872|sp|O82663.1|DHSA1_ARATH RecName:
           Full=Succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial; AltName: Full=Flavoprotein
           subunit 1 of complex II; Short=FP; Flags: Precursor
           gi|13605885|gb|AAK32928.1|AF367341_1 AT5g66760/MSN2_16
           [Arabidopsis thaliana]
           gi|16930699|gb|AAL32015.1|AF436833_1 AT5g66760/MSN2_16
           [Arabidopsis thaliana] gi|3660471|emb|CAA05025.1|
           succinate dehydrogenase flavoprotein alpha subunit
           [Arabidopsis thaliana] gi|8843734|dbj|BAA97282.1|
           succinate dehydrogenase flavoprotein alpha subunit
           [Arabidopsis thaliana] gi|15010746|gb|AAK74032.1|
           AT5g66760/MSN2_16 [Arabidopsis thaliana]
           gi|21700795|gb|AAM70521.1| AT5g66760/MSN2_16
           [Arabidopsis thaliana] gi|332010877|gb|AED98260.1|
           succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1 [Arabidopsis thaliana]
          Length = 634

 Score =  214 bits (545), Expect = 6e-54
 Identities = 100/110 (90%), Positives = 108/110 (98%)
 Frame = +3

Query: 3   TKEPIPVLPTVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGA 182
           TKEPIPVLPTVHYNMGGIPTNYHGEVV IKGDDPD+++PGLMAAGEAACASVHG+NRLGA
Sbjct: 385 TKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVIPGLMAAGEAACASVHGANRLGA 444

Query: 183 NSLLDIVVFGRACANRVAEISRPGQKQKPLEADAGEKTIAWLDKIRNSNG 332
           NSLLDIVVFGRACANRVAEIS+PG+KQKPLE DAGEKTIAWLD++RNSNG
Sbjct: 445 NSLLDIVVFGRACANRVAEISKPGEKQKPLEKDAGEKTIAWLDRLRNSNG 494


>ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis]
           gi|223529979|gb|EEF31905.1| succinate dehydrogenase,
           putative [Ricinus communis]
          Length = 622

 Score =  213 bits (542), Expect = 1e-53
 Identities = 100/110 (90%), Positives = 107/110 (97%)
 Frame = +3

Query: 3   TKEPIPVLPTVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGA 182
           TKEPIPVLPTVHYNMGGIPTNYHGEVV +KG+DPDS+VPGLMAAGEAACASVHG+NRLGA
Sbjct: 373 TKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDSVVPGLMAAGEAACASVHGANRLGA 432

Query: 183 NSLLDIVVFGRACANRVAEISRPGQKQKPLEADAGEKTIAWLDKIRNSNG 332
           NSLLDIVVFGRACANRVAEI RPG+KQKPLE DAGE+TIAWLDK+RNSNG
Sbjct: 433 NSLLDIVVFGRACANRVAEIQRPGEKQKPLEKDAGERTIAWLDKLRNSNG 482


>ref|XP_003558573.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit, mitochondrial-like [Brachypodium distachyon]
          Length = 617

 Score =  213 bits (541), Expect = 2e-53
 Identities = 99/110 (90%), Positives = 108/110 (98%)
 Frame = +3

Query: 3   TKEPIPVLPTVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGA 182
           TKEPIPVLPTVHYNMGGIPTNYHGEVV IKGD+PDS++PGL+AAGEAACASVHG+NRLGA
Sbjct: 368 TKEPIPVLPTVHYNMGGIPTNYHGEVVHIKGDNPDSVIPGLLAAGEAACASVHGANRLGA 427

Query: 183 NSLLDIVVFGRACANRVAEISRPGQKQKPLEADAGEKTIAWLDKIRNSNG 332
           NSLLDIVVFGRACANRVAEIS+PG+KQKPLE DAG+KTIAWLDK+RNSNG
Sbjct: 428 NSLLDIVVFGRACANRVAEISKPGEKQKPLEKDAGQKTIAWLDKLRNSNG 477


>ref|XP_002866741.1| succinate dehydrogenase 1-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297312576|gb|EFH43000.1| succinate dehydrogenase 1-1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 634

 Score =  213 bits (541), Expect = 2e-53
 Identities = 100/110 (90%), Positives = 108/110 (98%)
 Frame = +3

Query: 3   TKEPIPVLPTVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGA 182
           TKEPIPVLPTVHYNMGGIPTNYHGEVV IKGD+PD++VPGLMAAGEAACASVHG+NRLGA
Sbjct: 385 TKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDNPDAVVPGLMAAGEAACASVHGANRLGA 444

Query: 183 NSLLDIVVFGRACANRVAEISRPGQKQKPLEADAGEKTIAWLDKIRNSNG 332
           NSLLDIVVFGRACANRVAEIS+PG+KQKPLE DAGEKTIAWLD++RNSNG
Sbjct: 445 NSLLDIVVFGRACANRVAEISKPGEKQKPLEKDAGEKTIAWLDRLRNSNG 494


>tpg|DAA59498.1| TPA: hypothetical protein ZEAMMB73_792658 [Zea mays]
          Length = 586

 Score =  212 bits (539), Expect = 3e-53
 Identities = 99/110 (90%), Positives = 108/110 (98%)
 Frame = +3

Query: 3   TKEPIPVLPTVHYNMGGIPTNYHGEVVQIKGDDPDSLVPGLMAAGEAACASVHGSNRLGA 182
           TKEPIPVLPTVHYNMGGIPTNYHGEVV IKGD+PD++VPGLMAAGEAACASVHG+NRLGA
Sbjct: 370 TKEPIPVLPTVHYNMGGIPTNYHGEVVDIKGDNPDAVVPGLMAAGEAACASVHGANRLGA 429

Query: 183 NSLLDIVVFGRACANRVAEISRPGQKQKPLEADAGEKTIAWLDKIRNSNG 332
           NSLLDIVVFGRACANRVA+IS+PG+KQKPLE DAGEKTIAWLDK+RN+NG
Sbjct: 430 NSLLDIVVFGRACANRVADISKPGEKQKPLEKDAGEKTIAWLDKLRNANG 479