BLASTX nr result

ID: Coptis21_contig00002994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002994
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306717.1| predicted protein [Populus trichocarpa] gi|2...   122   7e-26
ref|XP_003634523.1| PREDICTED: uncharacterized protein LOC100854...   119   3e-25
emb|CBI18237.3| unnamed protein product [Vitis vinifera]              118   1e-24
ref|XP_002302161.1| predicted protein [Populus trichocarpa] gi|1...   116   3e-24
ref|XP_003556161.1| PREDICTED: uncharacterized protein LOC100776...   111   9e-23

>ref|XP_002306717.1| predicted protein [Populus trichocarpa] gi|222856166|gb|EEE93713.1|
           predicted protein [Populus trichocarpa]
          Length = 87

 Score =  122 bits (305), Expect = 7e-26
 Identities = 61/91 (67%), Positives = 77/91 (84%), Gaps = 8/91 (8%)
 Frame = +3

Query: 99  MEKSRSYPEYSASYSGGEFGFEDRSNSNNSYSFNGPKE--------TDPELKRKKRVASY 254
           MEKS+S+P+YS+S+SG EFGFEDRSNS   Y+FNGP +        +DPELKRKKR+ASY
Sbjct: 1   MEKSKSFPQYSSSFSG-EFGFEDRSNS---YNFNGPCQKGNGFATSSDPELKRKKRIASY 56

Query: 255 NVFTTEGKVKSSVRNSFKWIKTKFTEIRHGM 347
           NVFT EGK+KS+VRNSFKWIK+KF+++R+GM
Sbjct: 57  NVFTMEGKLKSNVRNSFKWIKSKFSDVRYGM 87


>ref|XP_003634523.1| PREDICTED: uncharacterized protein LOC100854843 [Vitis vinifera]
          Length = 87

 Score =  119 bits (299), Expect = 3e-25
 Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 8/91 (8%)
 Frame = +3

Query: 99  MEKSRSYPEYSASYSGGEFGFEDRSNSNNSYSFNGP--------KETDPELKRKKRVASY 254
           MEKSRS+PEYS+SY+G EFGF DRSNS   YSFNGP           DPELKRKKR+ASY
Sbjct: 1   MEKSRSFPEYSSSYAG-EFGFHDRSNS---YSFNGPCNKGSGFATSNDPELKRKKRIASY 56

Query: 255 NVFTTEGKVKSSVRNSFKWIKTKFTEIRHGM 347
           NVFT EGK+K+SVR+SFKWIKTK ++IR+G+
Sbjct: 57  NVFTMEGKLKTSVRSSFKWIKTKLSDIRYGV 87


>emb|CBI18237.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score =  118 bits (295), Expect = 1e-24
 Identities = 68/110 (61%), Positives = 80/110 (72%), Gaps = 10/110 (9%)
 Frame = +3

Query: 99  MEKSRSYPEYSASYSGGEFGFEDRSNSNNSYSFNGP--------KETDPELKRKKRVASY 254
           MEKSRS+PEYS+SY+G EFGF DRSNS   YSFNGP           DPELKRKKR+ASY
Sbjct: 1   MEKSRSFPEYSSSYAG-EFGFHDRSNS---YSFNGPCNKGSGFATSNDPELKRKKRIASY 56

Query: 255 NVFTTEGKVKSSVRNSFKWIKTKFTEIRHGM*TLYIV--DVYQILKCFLC 398
           NVFT EGK+K+SVR+SFKWIKTK ++IR+ +  L  V  D    LK F+C
Sbjct: 57  NVFTMEGKLKTSVRSSFKWIKTKLSDIRYDVQILKGVNDDFDGPLKDFVC 106


>ref|XP_002302161.1| predicted protein [Populus trichocarpa] gi|118482032|gb|ABK92947.1|
           unknown [Populus trichocarpa]
           gi|222843887|gb|EEE81434.1| predicted protein [Populus
           trichocarpa]
          Length = 87

 Score =  116 bits (291), Expect = 3e-24
 Identities = 59/91 (64%), Positives = 74/91 (81%), Gaps = 8/91 (8%)
 Frame = +3

Query: 99  MEKSRSYPEYSASYSGGEFGFEDRSNSNNSYSFNGPKE--------TDPELKRKKRVASY 254
           MEKS+S+P+YS+ +SG EFGFED+SNS   Y+FNGP +        +DPELKRKKR+ASY
Sbjct: 1   MEKSKSFPQYSSFFSG-EFGFEDQSNS---YNFNGPCQKGNGFATSSDPELKRKKRIASY 56

Query: 255 NVFTTEGKVKSSVRNSFKWIKTKFTEIRHGM 347
           NVFT EGK+KSS RNSFKWIK+KF++ R+GM
Sbjct: 57  NVFTVEGKLKSSARNSFKWIKSKFSDARYGM 87


>ref|XP_003556161.1| PREDICTED: uncharacterized protein LOC100776380 [Glycine max]
          Length = 86

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/91 (61%), Positives = 71/91 (78%), Gaps = 8/91 (8%)
 Frame = +3

Query: 99  MEKSRSYPEYSASYSGGEFGFEDRSNSNNSYSFNGPKE--------TDPELKRKKRVASY 254
           MEKS+S+PEYS SY+  EFGF +RSNS   Y+FNGP +        +DPELKRKKR+ +Y
Sbjct: 1   MEKSKSFPEYSCSYT--EFGFSERSNS---YNFNGPNQKGNGFSASSDPELKRKKRIKAY 55

Query: 255 NVFTTEGKVKSSVRNSFKWIKTKFTEIRHGM 347
           NV T EGK+K+SVRNSFKWIK KF++IR+G+
Sbjct: 56  NVLTVEGKLKTSVRNSFKWIKNKFSDIRYGV 86


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