BLASTX nr result

ID: Coptis21_contig00002990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002990
         (1607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265840.2| PREDICTED: uncharacterized protein LOC100265...   159   3e-36
emb|CBI34486.3| unnamed protein product [Vitis vinifera]              159   3e-36
ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-...   139   2e-30
ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-...   139   2e-30
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-...   129   2e-27

>ref|XP_002265840.2| PREDICTED: uncharacterized protein LOC100265054 [Vitis vinifera]
          Length = 853

 Score =  159 bits (401), Expect = 3e-36
 Identities = 102/227 (44%), Positives = 138/227 (60%), Gaps = 11/227 (4%)
 Frame = -3

Query: 1515 TPKGPLSHRSDTRHSRDESRSVENRHKKSKTQNSDYDASPYVLDDRA---KDYRGKKRSS 1345
            T +   + +SDT+  RDE+ + E R +KS+TQ++++D SP + DDR+   KD +GK+RS 
Sbjct: 342  TSRDRTTDKSDTKRLRDENHAAEIRRRKSRTQSNNHDGSP-IYDDRSTRYKDDKGKRRSD 400

Query: 1344 GKEDHGDLMPQNNKERHHQVEKK-LSGGKVELPTDRGTSR------DSTIASSRRKSSPV 1186
             KEDH D  P++ KE+   VEKK  SG K++  TDRG S       DST   +RR+SSP 
Sbjct: 401  DKEDHSDTRPRSTKEQRTDVEKKSTSGAKIDSGTDRGRSHSRHGDVDSTFGHNRRRSSPS 460

Query: 1185 AGSHFTKDQYRHGSKLNELKYKESVTEERIRDNVASREPTSVSAVPDRAFESHSMDKPKS 1006
            + SH  K+QYRH SK  E +Y++SV EER+R + A  E  SVS               +S
Sbjct: 461  SSSHVAKEQYRH-SKHEESRYQDSVPEERVRHSGAP-EKVSVS---------------RS 503

Query: 1005 MEKPIYKDKNQP-STEKSPIADAQVSPLQLKEKSHSLTSNKRRHSNR 868
            MEK I KD ++  S E+ P +DAQ SPLQ+ EKS S TS  RR  NR
Sbjct: 504  MEKAIQKDDSRVLSAERRPNSDAQTSPLQMTEKSPSSTSIDRRRVNR 550


>emb|CBI34486.3| unnamed protein product [Vitis vinifera]
          Length = 1479

 Score =  159 bits (401), Expect = 3e-36
 Identities = 102/227 (44%), Positives = 138/227 (60%), Gaps = 11/227 (4%)
 Frame = -3

Query: 1515 TPKGPLSHRSDTRHSRDESRSVENRHKKSKTQNSDYDASPYVLDDRA---KDYRGKKRSS 1345
            T +   + +SDT+  RDE+ + E R +KS+TQ++++D SP + DDR+   KD +GK+RS 
Sbjct: 342  TSRDRTTDKSDTKRLRDENHAAEIRRRKSRTQSNNHDGSP-IYDDRSTRYKDDKGKRRSD 400

Query: 1344 GKEDHGDLMPQNNKERHHQVEKK-LSGGKVELPTDRGTSR------DSTIASSRRKSSPV 1186
             KEDH D  P++ KE+   VEKK  SG K++  TDRG S       DST   +RR+SSP 
Sbjct: 401  DKEDHSDTRPRSTKEQRTDVEKKSTSGAKIDSGTDRGRSHSRHGDVDSTFGHNRRRSSPS 460

Query: 1185 AGSHFTKDQYRHGSKLNELKYKESVTEERIRDNVASREPTSVSAVPDRAFESHSMDKPKS 1006
            + SH  K+QYRH SK  E +Y++SV EER+R + A  E  SVS               +S
Sbjct: 461  SSSHVAKEQYRH-SKHEESRYQDSVPEERVRHSGAP-EKVSVS---------------RS 503

Query: 1005 MEKPIYKDKNQP-STEKSPIADAQVSPLQLKEKSHSLTSNKRRHSNR 868
            MEK I KD ++  S E+ P +DAQ SPLQ+ EKS S TS  RR  NR
Sbjct: 504  MEKAIQKDDSRVLSAERRPNSDAQTSPLQMTEKSPSSTSIDRRRVNR 550


>ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 735

 Score =  139 bits (350), Expect = 2e-30
 Identities = 95/265 (35%), Positives = 139/265 (52%), Gaps = 47/265 (17%)
 Frame = -3

Query: 738 HRIKILNLDWSQVRAYHLYFLLSFHVPKGGEVLSLAIYSSDVEAAKAPTESIHS------ 577
           HR+ ++NLDW  V+A  LY +LS  +PKGG++LS+A+Y S+    +   E +H       
Sbjct: 207 HRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLFD 266

Query: 576 -------------------DNS----------RCYFAVVECDSCATADYIYETCDGMKIK 484
                              DN           R Y+AVVECDS ATADY+Y+TCDG++ +
Sbjct: 267 GEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEFE 326

Query: 483 ITPDVLDLYLIPDSVKFEHPPHDVVTKGA---KIMDYMKPSQEIEVEPYYWNGNESEIDD 313
            + ++LDL  IPDS+KFEHPP D  T+     +++++  P+ +       W+ +E +   
Sbjct: 327 RSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRVK 386

Query: 312 AVLRFKYNPDKLDGLDLDEYFASXXXXXXXXXDGVIPGA-----KMDKYFSLLQVD-DGR 151
           A+ R K+N D+L  L+L E+ AS         D           K DKY +LLQ D DG 
Sbjct: 387 ALKR-KFNADQLADLELKEFLASDESESDDESDDGEDQVDKKRKKGDKYRALLQSDEDGE 445

Query: 150 ND-DKDMEVTIS--IEGRTKCILGK 85
            D  +DMEVT +  +E  +K IL K
Sbjct: 446 QDGGQDMEVTFNTGLEDISKRILEK 470


>ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
          Length = 740

 Score =  139 bits (350), Expect = 2e-30
 Identities = 95/265 (35%), Positives = 139/265 (52%), Gaps = 47/265 (17%)
 Frame = -3

Query: 738  HRIKILNLDWSQVRAYHLYFLLSFHVPKGGEVLSLAIYSSDVEAAKAPTESIHS------ 577
            HR+ ++NLDW  V+A  LY +LS  +PKGG++LS+A+Y S+    +   E +H       
Sbjct: 212  HRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLFD 271

Query: 576  -------------------DNS----------RCYFAVVECDSCATADYIYETCDGMKIK 484
                               DN           R Y+AVVECDS ATADY+Y+TCDG++ +
Sbjct: 272  GEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEFE 331

Query: 483  ITPDVLDLYLIPDSVKFEHPPHDVVTKGA---KIMDYMKPSQEIEVEPYYWNGNESEIDD 313
             + ++LDL  IPDS+KFEHPP D  T+     +++++  P+ +       W+ +E +   
Sbjct: 332  RSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRVK 391

Query: 312  AVLRFKYNPDKLDGLDLDEYFASXXXXXXXXXDGVIPGA-----KMDKYFSLLQVD-DGR 151
            A+ R K+N D+L  L+L E+ AS         D           K DKY +LLQ D DG 
Sbjct: 392  ALKR-KFNADQLADLELKEFLASDESESDDESDDGEDQVDKKRKKGDKYRALLQSDEDGE 450

Query: 150  ND-DKDMEVTIS--IEGRTKCILGK 85
             D  +DMEVT +  +E  +K IL K
Sbjct: 451  QDGGQDMEVTFNTGLEDISKRILEK 475


>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
          Length = 726

 Score =  129 bits (324), Expect = 2e-27
 Identities = 88/279 (31%), Positives = 143/279 (51%), Gaps = 44/279 (15%)
 Frame = -3

Query: 738  HRIKILNLDWSQVRAYHLYFLLSFHVPKGGEVLSLAIYSSDVEAAKAPTESIHS------ 577
            HR+ ++N++W QV+A  L+ +LS  +PK G +LS+AIY S+    +   E++H       
Sbjct: 187  HRLAVVNMEWRQVKAVDLFMVLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLFD 246

Query: 576  ----------------------DNSRC--YFAVVECDSCATADYIYETCDGMKIKITPDV 469
                                  + SR   Y+AVV+CDS ATADY+Y+ CDG++ + + +V
Sbjct: 247  DEKEQSDDDGDNEIDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSNV 306

Query: 468  LDLYLIPDSVKFEHPPHDVVTKG-AKIMDYMKPSQEIEVEPYYWNGNESEIDDA-VLRFK 295
            LDL  IPDS++F+HPPHD+ T+  AK       ++ ++    + + +E E   A  L+ K
Sbjct: 307  LDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKRK 366

Query: 294  YNPDKLDGLDLDEYFA-----SXXXXXXXXXDGVIPGAKMDKYFSLLQVDDG-----RND 145
            YN D++  L + E+ A     S                + +KY +LL+  DG       D
Sbjct: 367  YNDDEVAELAMKEFLASDTDESETDDNENDDQSDKEHKRQNKYLALLESGDGSDRDDEED 426

Query: 144  DKDMEVTIS--IEGRTKCILGKNINFWYDLIWDKYVEGR 34
             +DMEVT +  +E  +K IL K      + +W+ Y++ R
Sbjct: 427  GQDMEVTFNTGLEDISKRILEKR-EKKSETVWEAYLKKR 464


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