BLASTX nr result
ID: Coptis21_contig00002984
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002984
(2064 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera] 686 0.0
ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 674 0.0
ref|XP_002514028.1| conserved hypothetical protein [Ricinus comm... 634 e-179
ref|XP_002301091.1| predicted protein [Populus trichocarpa] gi|2... 632 e-178
emb|CBI19252.3| unnamed protein product [Vitis vinifera] 627 e-177
>emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
Length = 1225
Score = 686 bits (1770), Expect = 0.0
Identities = 378/636 (59%), Positives = 444/636 (69%), Gaps = 22/636 (3%)
Frame = +3
Query: 165 RRNSISYVKSLKVDN-HTMPSGSSEIASSVPNASSGLKTSVRKVVQQFRVPKPSKHNPFG 341
R + + VKS KVD HT+ + SS+IA+ P S+GLKTSVRKVV QFR K SK P G
Sbjct: 568 RGHPVPNVKSGKVDGVHTVAASSSQIANHSPIVSNGLKTSVRKVVDQFRPSKLSKSLPLG 627
Query: 342 L-SEVAERNNYKMLFPYDLFIKLYNCGNVETRPCGLTNCGNSCYANAVLQCLAFTQPLTA 518
+ SE+A R + K LF Y++F+KLY VE RPCGL NCGNSCYANAVLQCLAFT PLT+
Sbjct: 628 VGSEIAGRCSDKGLFSYEVFVKLYIWNKVELRPCGLMNCGNSCYANAVLQCLAFTPPLTS 687
Query: 519 YLLQGLHSKACPRKDWCFTCEFECLIQKASEGTSPLSPNGILSQLPSIGSHLGNGKEEDA 698
Y LQGLHSK+C +K+WCFTCEFE LI KA EG SPLSP GILSQ+ +IGSHLGNGKEEDA
Sbjct: 688 YFLQGLHSKSCLKKEWCFTCEFESLILKAKEGNSPLSPLGILSQIRNIGSHLGNGKEEDA 747
Query: 699 HEFLRYAIDTMQSVCLKEAGVYALNPLAEETTLIGLIFGGYLRSKIKCMKCHVKSERHER 878
HEFLRYAID MQSVCLKEAGV A L EET+LIGL FGGYLRSKIKCMKCH KSERHER
Sbjct: 748 HEFLRYAIDAMQSVCLKEAGVNASGSLEEETSLIGLTFGGYLRSKIKCMKCHGKSERHER 807
Query: 879 MMDLTVEIQGDIRTLEEALGKFTATEVLDGENKYHCIRCKSYEKAKKKLTVLEAPNVLTI 1058
MMDLTVEI+GDI TLEEAL KFT+TE+LDGENKY C RCKSYEKAKKKLTV EAPN+LTI
Sbjct: 808 MMDLTVEIEGDIGTLEEALHKFTSTEILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTI 867
Query: 1059 AFKRFQSGKFGKLNKSIHFPEILNLAPYMSGKNDKSPIYRLYGVVVHLDVKNASFSGHYV 1238
A KRFQSGKFGKLNKSI FPEIL+LAP+MSG +DKSPIYRLY VVVHLD+ NA+FSGHYV
Sbjct: 868 ALKRFQSGKFGKLNKSIRFPEILDLAPFMSGTSDKSPIYRLYAVVVHLDIMNAAFSGHYV 927
Query: 1239 CYVKNLEGKWFKIDDSRVKPVELERVLSKGAYMLLYSRCSPQPPSFIRSAITSNRIKVKR 1418
CYVKN++ KWFKIDDS VKPVELERVL+KGAYMLLY+RCSP+ P IR+A+ + R
Sbjct: 928 CYVKNIQNKWFKIDDSTVKPVELERVLTKGAYMLLYARCSPRAPRLIRNAV------IPR 981
Query: 1419 DRSSEVTTTNHLKKDTSARAKCCSAAVRADTSGSTA-------------NRRPDEYPYQM 1559
+R E ++ ++ K+T+ + +R D+ STA +R P + P
Sbjct: 982 NRKLEAASSRNIVKNTTFK-------LRHDSIDSTAGQSMIHSKPTAYHSRSPVDCPASF 1034
Query: 1560 TSDARSEVLDPFNRRVHQVNRVPXXXXXXXXXXXXXXXXXXXXXTESTRHSTSTDDLSDY 1739
S E P+ +R+ + + TES R STST+DLSDY
Sbjct: 1035 ESFYSEETRFPWKQRIVEAD--------SSSDNSSLFTEEGSCSTESNRDSTSTEDLSDY 1086
Query: 1740 IFGDSRFGWNSPWRGSDESDVSCSSPFLRASPSTGSHRNASNSYGAKGHPYSSPGNI--- 1910
IFG S GW+SPW S +SD S SS LR+SP +R +S S H + +
Sbjct: 1087 IFGYSGRGWSSPWTNSSDSDTSSSSSSLRSSPLAELNRYSSCS-TETSHSQTDKAKLVME 1145
Query: 1911 -DTFSARLPRDGREC--LQGK-ENPLLYSDTTKYCR 2006
D F AR P + ++GK + P L SD K CR
Sbjct: 1146 GDGFWARPPNGSSKLVDMEGKGDIPFLLSDIAKPCR 1181
>ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 1213
Score = 674 bits (1740), Expect = 0.0
Identities = 373/635 (58%), Positives = 436/635 (68%), Gaps = 21/635 (3%)
Frame = +3
Query: 165 RRNSISYVKSLKVDN-HTMPSGSSEIASSVPNASSGLKTSVRKVVQQFRVPKPSKHNPFG 341
R + + VKS KVD HT+ + SS+IA+ P S+GLKTSVRKVV QFR K SK P G
Sbjct: 568 RGHPVPNVKSGKVDGVHTVAASSSQIANHSPIVSNGLKTSVRKVVDQFRPSKLSKSLPLG 627
Query: 342 LSEVAERNNYKMLFPYDLFIKLYNCGNVETRPCGLTNCGNSCYANAVLQCLAFTQPLTAY 521
LF Y++F+KLY VE RPCGL NCGNSCYANAVLQCLAFT PLT+Y
Sbjct: 628 -----------GLFSYEVFVKLYIWNKVELRPCGLMNCGNSCYANAVLQCLAFTPPLTSY 676
Query: 522 LLQGLHSKACPRKDWCFTCEFECLIQKASEGTSPLSPNGILSQLPSIGSHLGNGKEEDAH 701
LQGLHSK+C +K+WCFTCEFE LI KA EG SPLSP GILSQ+ +IGSHLGNGKEEDAH
Sbjct: 677 FLQGLHSKSCLKKEWCFTCEFESLILKAKEGNSPLSPLGILSQIRNIGSHLGNGKEEDAH 736
Query: 702 EFLRYAIDTMQSVCLKEAGVYALNPLAEETTLIGLIFGGYLRSKIKCMKCHVKSERHERM 881
EFLRYAID MQSVCLKEAGV A L EET+LIGL FGGYLRSKIKCMKCH KSERHERM
Sbjct: 737 EFLRYAIDAMQSVCLKEAGVNASGSLEEETSLIGLTFGGYLRSKIKCMKCHGKSERHERM 796
Query: 882 MDLTVEIQGDIRTLEEALGKFTATEVLDGENKYHCIRCKSYEKAKKKLTVLEAPNVLTIA 1061
MDLTVEI+GDI TLEEAL KFT+TE+LDGENKY C RCKSYEKAKKKLTV EAPN+LTIA
Sbjct: 797 MDLTVEIEGDIGTLEEALHKFTSTEILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIA 856
Query: 1062 FKRFQSGKFGKLNKSIHFPEILNLAPYMSGKNDKSPIYRLYGVVVHLDVKNASFSGHYVC 1241
KRFQSGKFGKLNKSI FPEIL+LAP+MSG +DKSPIYRLY VVVHLD+ NA+FSGHYVC
Sbjct: 857 LKRFQSGKFGKLNKSIRFPEILDLAPFMSGTSDKSPIYRLYAVVVHLDIMNAAFSGHYVC 916
Query: 1242 YVKNLEGKWFKIDDSRVKPVELERVLSKGAYMLLYSRCSPQPPSFIRSAITSNRIKVKRD 1421
YVKN++ KWFKIDDS VKPVELERVL+KGAYMLLY+RCSP+ P IR+A+ + R+
Sbjct: 917 YVKNIQNKWFKIDDSTVKPVELERVLTKGAYMLLYARCSPRAPRLIRNAV------IPRN 970
Query: 1422 RSSEVTTTNHLKKDTSARAKCCSAAVRADTSGSTA-------------NRRPDEYPYQMT 1562
R E ++ ++ K+T+ + +R D+ STA +R P + P
Sbjct: 971 RKLEAASSRNIVKNTTFK-------LRHDSIDSTAGQSMIHSKPTAYHSRSPVDCPASFE 1023
Query: 1563 SDARSEVLDPFNRRVHQVNRVPXXXXXXXXXXXXXXXXXXXXXTESTRHSTSTDDLSDYI 1742
S E P+ +R+ + + TES R STST+DLSDYI
Sbjct: 1024 SFYSEETRFPWKQRIVEAD--------SSSDNSSLFTEEGSCSTESNRDSTSTEDLSDYI 1075
Query: 1743 FGDSRFGWNSPWRGSDESDVSCSSPFLRASPSTGSHRNASNSYGAKGHPYSSPGNI---- 1910
FG S GW+SPW S +SD S SS LR+SP +R +S S H + +
Sbjct: 1076 FGYSGRGWSSPWTNSSDSDTSSSSSSLRSSPLAELNRYSSCS-TETSHSQTDKAKLVMEG 1134
Query: 1911 DTFSARLPRDGREC--LQGK-ENPLLYSDTTKYCR 2006
D F AR P + ++GK + P L SD K CR
Sbjct: 1135 DGFWARPPNGSSKLVDMEGKGDIPFLLSDIAKPCR 1169
>ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
gi|223547114|gb|EEF48611.1| conserved hypothetical
protein [Ricinus communis]
Length = 1060
Score = 634 bits (1635), Expect = e-179
Identities = 353/609 (57%), Positives = 414/609 (67%), Gaps = 3/609 (0%)
Frame = +3
Query: 33 LAAEVSRSSNIVDNDQSNHSQILECKERRSVXXXXXXXXXXXXXRRNSISYVKSLKVDNH 212
L + S SNI+ ND + S + + + V + ++ +KS K DN
Sbjct: 403 LKSSSSNQSNIIVNDTLSTSNLSKSR----VSSSSSHTYLASSGNGHPVASLKSGKNDNL 458
Query: 213 TMPS-GSSEIASSVPNASSGLKTSVRKVVQQFRVPKPSKHNPFGLSEVAERNNYKMLFPY 389
+ SS++ SS P++ SGLK+SVRKVV Q R PK K++ GL F Y
Sbjct: 459 EADAVPSSQMTSSSPSSISGLKSSVRKVVDQLRGPKCGKYSDKGL------------FSY 506
Query: 390 DLFIKLYNCGNVETRPCGLTNCGNSCYANAVLQCLAFTQPLTAYLLQGLHSKACPRKDWC 569
DLF+KLY VE RPCGL NCGNSCYANAVLQCLAFT PLTAY +QGLHSK C K+WC
Sbjct: 507 DLFVKLYASNKVEMRPCGLINCGNSCYANAVLQCLAFTPPLTAYFVQGLHSKECVNKEWC 566
Query: 570 FTCEFECLIQKASEGTSPLSPNGILSQLPSIGSHLGNGKEEDAHEFLRYAIDTMQSVCLK 749
FTCEFE L+ KA EG SPLSP GILSQL +I S LG G+EEDAHEFLRYAIDTMQSVCLK
Sbjct: 567 FTCEFESLMLKAKEGKSPLSPIGILSQLQNIASQLGTGREEDAHEFLRYAIDTMQSVCLK 626
Query: 750 EAGVYALNPLAEETTLIGLIFGGYLRSKIKCMKCHVKSERHERMMDLTVEIQGDIRTLEE 929
EAGV AL EETTLIGL FGGYLRSKIKCMKCH KSERHERMMDLTVEI+GDI LE+
Sbjct: 627 EAGVNALGSFEEETTLIGLTFGGYLRSKIKCMKCHYKSERHERMMDLTVEIEGDIEKLED 686
Query: 930 ALGKFTATEVLDGENKYHCIRCKSYEKAKKKLTVLEAPNVLTIAFKRFQSGKFGKLNKSI 1109
AL +FT TE+LDG+NKY C RCKSYEKAKKKLT+LEAPNVLTIA KRFQSGKFGKLNKSI
Sbjct: 687 ALRRFTGTEILDGDNKYQCGRCKSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKSI 746
Query: 1110 HFPEILNLAPYMSGKNDKSPIYRLYGVVVHLDVKNASFSGHYVCYVKNLEGKWFKIDDSR 1289
FPEIL+LAPYMSG +DKSPIYRLYGVVVHLD+ NASFSGHYVCYVKN++ KWFKIDDS
Sbjct: 747 RFPEILDLAPYMSGTSDKSPIYRLYGVVVHLDIMNASFSGHYVCYVKNVQNKWFKIDDST 806
Query: 1290 VKPVELERVLSKGAYMLLYSRCSPQPPSFIRSAITSNRIKVKRDRSSEVTTTNHLKKDTS 1469
V VELERVL+KGAYMLLY+RCSP+ P IR+ I S+ K+K +S V+ K+T+
Sbjct: 807 VTAVELERVLTKGAYMLLYARCSPRAPRLIRNRIASSDPKMK-GSASRVSA-----KNTA 860
Query: 1470 ARAKCCSAAVRADTSGSTANRRPDEYPYQ-MTSDARSEVLDPFNRRVHQVNRV-PXXXXX 1643
++ S T + P+ +P + MTS ++ F + H + R+
Sbjct: 861 LNSRSSS------THPNVVRFNPNSFPPENMTS------VESFYLKFHHLQRILEEDSSS 908
Query: 1644 XXXXXXXXXXXXXXXXTESTRHSTSTDDLSDYIFGDSRFGWNSPWRGSDESDVSCSSPFL 1823
TESTR STSTDDLSD+IFG GWNS W+ + +SD S SS
Sbjct: 909 DNYSFTSSNSDEGSCSTESTRDSTSTDDLSDFIFG----GWNS-WKSTSDSDTSSSSSSS 963
Query: 1824 RASPSTGSH 1850
+SP H
Sbjct: 964 SSSPLYTRH 972
>ref|XP_002301091.1| predicted protein [Populus trichocarpa] gi|222842817|gb|EEE80364.1|
predicted protein [Populus trichocarpa]
Length = 1095
Score = 632 bits (1629), Expect = e-178
Identities = 357/620 (57%), Positives = 421/620 (67%), Gaps = 8/620 (1%)
Frame = +3
Query: 171 NSISYVK-SLKVDN-HTMPSGSSEIASSVPNASSGLKTSVRKVVQQFRVPKPSKHNPFGL 344
+S+S VK KV+N + +S+I+S P++ +GLK+SV KVV QFR PK +++ GL
Sbjct: 479 HSVSSVKLGGKVENVEPGAAATSQISSYSPSSINGLKSSVWKVVDQFRGPKCGRYSNKGL 538
Query: 345 SEVAERNNYKMLFPYDLFIKLYNCGNVETRPCGLTNCGNSCYANAVLQCLAFTQPLTAYL 524
FPYDLF+KLY VE RPCGL NCGNSCYANAVLQCLAFT PLT+Y
Sbjct: 539 ------------FPYDLFVKLYTSNKVEMRPCGLINCGNSCYANAVLQCLAFTPPLTSYF 586
Query: 525 LQGLHSKACPRKDWCFTCEFECLIQKASEGTSPLSPNGILSQLPSIGSHLGNGKEEDAHE 704
+QGLHSKAC +K+ CF+CEFE +I KA EG SPLSP GILSQL +IGS LGNG+EEDAHE
Sbjct: 587 VQGLHSKACVKKERCFSCEFEKVILKAKEGKSPLSPIGILSQLQNIGSQLGNGREEDAHE 646
Query: 705 FLRYAIDTMQSVCLKEAGVYALNPLAEETTLIGLIFGGYLRSKIKCMKCHVKSERHERMM 884
FLRYAID MQSVCLKEA V A++ EE TLIGL FGGYLRSKIKCMKCH KSE ERMM
Sbjct: 647 FLRYAIDAMQSVCLKEARVNAVDSFEEEATLIGLTFGGYLRSKIKCMKCHYKSEWQERMM 706
Query: 885 DLTVEIQGDIRTLEEALGKFTATEVLDGENKYHCIRCKSYEKAKKKLTVLEAPNVLTIAF 1064
DLTVEI+GDI LE+AL +FT TE+LDG+NKY C RC+SYEKAKKKLT+LEAPNVLTIA
Sbjct: 707 DLTVEIEGDIGKLEDALRRFTGTEILDGDNKYQCGRCRSYEKAKKKLTILEAPNVLTIAL 766
Query: 1065 KRFQSGKFGKLNKSIHFPEILNLAPYMSGKNDKSPIYRLYGVVVHLDVKNASFSGHYVCY 1244
KRFQSGKFGKLNKSI FPEIL+LAPYMSG +DKSPIYRLYGV+VHLDV NA+FSGHYVCY
Sbjct: 767 KRFQSGKFGKLNKSIRFPEILDLAPYMSGTSDKSPIYRLYGVIVHLDVMNAAFSGHYVCY 826
Query: 1245 VKNLEGKWFKIDDSRVKPVELERVLSKGAYMLLYSRCSPQPPSFIRSAITSNRIKVKRDR 1424
VKN++ KWFKIDDS V VELERVLSKGAYMLLY+RCSP+ P IRS I S+ K K
Sbjct: 827 VKNIQNKWFKIDDSTVTAVELERVLSKGAYMLLYARCSPRAPRLIRSRIISSDPKNKCSP 886
Query: 1425 SSEVTTTNHLKKDTSARAKCCSAAVRADTSGSTANRRPDEYPYQMTSDARSEVLDPFNRR 1604
S T L R+ + S+ PD P SD + V + F +
Sbjct: 887 SKIKATNTALNS-------------RSMSMQSSVQSHPDSIP----SDNLASV-ESFYLK 928
Query: 1605 VHQVNRV-PXXXXXXXXXXXXXXXXXXXXXTESTRHSTSTDDLSDYIFGDSRFGWNSPWR 1781
+H++ R+ T+ST STSTDDLSDYIFG WNS WR
Sbjct: 929 LHRLLRISEEDSSSDNFSFTSGNSDEASCSTDSTHDSTSTDDLSDYIFG----SWNS-WR 983
Query: 1782 GSDESDVSCSSP--FLRASPSTGSHRNASNSYGAKGHPYSSPGNIDTFSARLPRDGREC- 1952
+ +SD S SS + R SP ++N S++Y G P S R+P GR+
Sbjct: 984 NTSDSDTSSSSSPLYSRYSPHADKNQNDSHAYSRIGGP--------DLSDRIPSGGRKLV 1035
Query: 1953 -LQGKE-NPLLYSDTTKYCR 2006
L+GK N L+ DTT+ CR
Sbjct: 1036 DLEGKRGNSFLHPDTTEQCR 1055
>emb|CBI19252.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 627 bits (1618), Expect = e-177
Identities = 321/458 (70%), Positives = 369/458 (80%), Gaps = 2/458 (0%)
Frame = +3
Query: 165 RRNSISYVKSLKVDN-HTMPSGSSEIASSVPNASSGLKTSVRKVVQQFRVPKPSKHNPFG 341
R + + VKS KVD HT+ + SS+IA+ P S+GLKTSVRKVV QFR K SK P G
Sbjct: 378 RGHPVPNVKSGKVDGVHTVAASSSQIANHSPIVSNGLKTSVRKVVDQFRPSKLSKSLPLG 437
Query: 342 L-SEVAERNNYKMLFPYDLFIKLYNCGNVETRPCGLTNCGNSCYANAVLQCLAFTQPLTA 518
+ SE+A R + K LF Y++F+KLY VE RPCGL NCGNSCYANAVLQCLAFT PLT+
Sbjct: 438 VGSEIAGRCSDKGLFSYEVFVKLYIWNKVELRPCGLMNCGNSCYANAVLQCLAFTPPLTS 497
Query: 519 YLLQGLHSKACPRKDWCFTCEFECLIQKASEGTSPLSPNGILSQLPSIGSHLGNGKEEDA 698
Y LQGLHSK+C +K+WCFTCEFE LI KA EG SPLSP GILSQ+ +IGSHLGNGKEEDA
Sbjct: 498 YFLQGLHSKSCLKKEWCFTCEFESLILKAKEGNSPLSPLGILSQIRNIGSHLGNGKEEDA 557
Query: 699 HEFLRYAIDTMQSVCLKEAGVYALNPLAEETTLIGLIFGGYLRSKIKCMKCHVKSERHER 878
HEFLRYAID MQSVCLKEAGV A L EET+LIGL FGGYLRSKIKCMKCH KSERHER
Sbjct: 558 HEFLRYAIDAMQSVCLKEAGVNASGSLEEETSLIGLTFGGYLRSKIKCMKCHGKSERHER 617
Query: 879 MMDLTVEIQGDIRTLEEALGKFTATEVLDGENKYHCIRCKSYEKAKKKLTVLEAPNVLTI 1058
MMDLTVEI+GDI TLEEAL KFT+TE+LDGENKY C RCKSYEKAKKKLTV EAPN+LTI
Sbjct: 618 MMDLTVEIEGDIGTLEEALHKFTSTEILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTI 677
Query: 1059 AFKRFQSGKFGKLNKSIHFPEILNLAPYMSGKNDKSPIYRLYGVVVHLDVKNASFSGHYV 1238
A KRFQSGKFGKLNKSI FPEIL+LAP+MSG +DKSPIYRLY VVVHLD+ NA+FSGHYV
Sbjct: 678 ALKRFQSGKFGKLNKSIRFPEILDLAPFMSGTSDKSPIYRLYAVVVHLDIMNAAFSGHYV 737
Query: 1239 CYVKNLEGKWFKIDDSRVKPVELERVLSKGAYMLLYSRCSPQPPSFIRSAITSNRIKVKR 1418
CYVKN++ KWFKIDDS VKPVELERVL+KGAYMLLY+RCSP+ P IR+A+ + R
Sbjct: 738 CYVKNIQNKWFKIDDSTVKPVELERVLTKGAYMLLYARCSPRAPRLIRNAV------IPR 791
Query: 1419 DRSSEVTTTNHLKKDTSARAKCCSAAVRADTSGSTANR 1532
+R E ++ ++ K+T+ + +R D+ STA +
Sbjct: 792 NRKLEAASSRNIVKNTTFK-------LRHDSIDSTAGQ 822