BLASTX nr result
ID: Coptis21_contig00002981
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002981 (1012 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus... 338 9e-91 emb|CAN84167.1| hypothetical protein VITISV_018882 [Vitis vinifera] 338 9e-91 ref|XP_002277094.1| PREDICTED: 60S ribosomal protein L13-1 [Viti... 337 3e-90 ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|2... 336 5e-90 ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus... 335 8e-90 >ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus communis] gi|223540760|gb|EEF42320.1| 60S ribosomal protein L13, putative [Ricinus communis] Length = 207 Score = 338 bits (868), Expect = 9e-91 Identities = 164/192 (85%), Positives = 179/192 (93%) Frame = -1 Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707 MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPTAGPLRPIVHG Sbjct: 1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRAARQKKAVKIFPRPTAGPLRPIVHG 60 Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527 QTLKYNMK+RAGRGF+LEELKAAGIPKKLAPTIGI+VDHRR+NRSLEGLQANVQRLKT+K Sbjct: 61 QTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYK 120 Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347 AKLVVFPRRA KFK+GDS EELATATQV G+ MPI EKP+VELVK TEE+K+FKAY K Sbjct: 121 AKLVVFPRRARKFKAGDSAAEELATATQVQGQYMPIAREKPSVELVKVTEEMKSFKAYDK 180 Query: 346 LRIERVNKKHQG 311 LR+ER+N++H G Sbjct: 181 LRVERMNQRHLG 192 >emb|CAN84167.1| hypothetical protein VITISV_018882 [Vitis vinifera] Length = 207 Score = 338 bits (868), Expect = 9e-91 Identities = 165/192 (85%), Positives = 179/192 (93%) Frame = -1 Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707 MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPT+GPLRPIVHG Sbjct: 1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPIVHG 60 Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI+VDHRRRNRSLE LQANVQRLKT+K Sbjct: 61 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYK 120 Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347 AKLVVFPRR KFK+GDS++EELATATQV G MPIV EKPTVELVK T+E+K+FKAY K Sbjct: 121 AKLVVFPRRTRKFKAGDSSVEELATATQVQGLYMPIVREKPTVELVKVTDEMKSFKAYGK 180 Query: 346 LRIERVNKKHQG 311 LR+ER+N++H G Sbjct: 181 LRVERMNQRHVG 192 >ref|XP_002277094.1| PREDICTED: 60S ribosomal protein L13-1 [Vitis vinifera] gi|296087125|emb|CBI33499.3| unnamed protein product [Vitis vinifera] Length = 207 Score = 337 bits (864), Expect = 3e-90 Identities = 164/192 (85%), Positives = 178/192 (92%) Frame = -1 Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707 MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPT+GPLRPIVHG Sbjct: 1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPIVHG 60 Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527 QTLKYNMKVRAGRGFSLEELK AGIPKKLAPTIGI+VDHRRRNRSLE LQANVQRLKT+K Sbjct: 61 QTLKYNMKVRAGRGFSLEELKVAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYK 120 Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347 AKLVVFPRR KFK+GDS++EELATATQV G MPIV EKPTVELVK T+E+K+FKAY K Sbjct: 121 AKLVVFPRRTRKFKAGDSSVEELATATQVQGLYMPIVREKPTVELVKVTDEMKSFKAYGK 180 Query: 346 LRIERVNKKHQG 311 LR+ER+N++H G Sbjct: 181 LRVERMNQRHVG 192 >ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|222857408|gb|EEE94955.1| predicted protein [Populus trichocarpa] Length = 207 Score = 336 bits (862), Expect = 5e-90 Identities = 166/192 (86%), Positives = 177/192 (92%) Frame = -1 Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707 MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPTAGPLRPIVHG Sbjct: 1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHG 60 Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI+VDHRRRNRSLEGLQANVQRLKT+K Sbjct: 61 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQANVQRLKTYK 120 Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347 AKLVVFPRRA KFK+GDS EELATATQV G+ MPIV EKP VELVK TEE+K+F+AY K Sbjct: 121 AKLVVFPRRARKFKAGDSAPEELATATQVQGQIMPIVLEKPCVELVKVTEEMKSFRAYDK 180 Query: 346 LRIERVNKKHQG 311 LR+ER + +H G Sbjct: 181 LRVERTSARHVG 192 >ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus communis] gi|223531254|gb|EEF33097.1| 60S ribosomal protein L13, putative [Ricinus communis] Length = 207 Score = 335 bits (860), Expect = 8e-90 Identities = 164/192 (85%), Positives = 179/192 (93%) Frame = -1 Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707 MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPTAGPLRPIVHG Sbjct: 1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPIVHG 60 Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527 QTLKYNMK+RAGRGF+LEELKAAGIPKKLAPTIGI+VDHRR+NRSLEGLQANVQRLKT+K Sbjct: 61 QTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYK 120 Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347 AKLVVFPRRA K K+GDS EELATATQV G+ MPIV EKP+VELVK TEE+K+FKAY K Sbjct: 121 AKLVVFPRRARKSKAGDSAPEELATATQVQGKYMPIVREKPSVELVKVTEEMKSFKAYDK 180 Query: 346 LRIERVNKKHQG 311 LR+ER+N++H G Sbjct: 181 LRVERMNQRHLG 192