BLASTX nr result

ID: Coptis21_contig00002981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002981
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus...   338   9e-91
emb|CAN84167.1| hypothetical protein VITISV_018882 [Vitis vinifera]   338   9e-91
ref|XP_002277094.1| PREDICTED: 60S ribosomal protein L13-1 [Viti...   337   3e-90
ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|2...   336   5e-90
ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus...   335   8e-90

>ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223540760|gb|EEF42320.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score =  338 bits (868), Expect = 9e-91
 Identities = 164/192 (85%), Positives = 179/192 (93%)
 Frame = -1

Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707
           MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPTAGPLRPIVHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRAARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527
           QTLKYNMK+RAGRGF+LEELKAAGIPKKLAPTIGI+VDHRR+NRSLEGLQANVQRLKT+K
Sbjct: 61  QTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYK 120

Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347
           AKLVVFPRRA KFK+GDS  EELATATQV G+ MPI  EKP+VELVK TEE+K+FKAY K
Sbjct: 121 AKLVVFPRRARKFKAGDSAAEELATATQVQGQYMPIAREKPSVELVKVTEEMKSFKAYDK 180

Query: 346 LRIERVNKKHQG 311
           LR+ER+N++H G
Sbjct: 181 LRVERMNQRHLG 192


>emb|CAN84167.1| hypothetical protein VITISV_018882 [Vitis vinifera]
          Length = 207

 Score =  338 bits (868), Expect = 9e-91
 Identities = 165/192 (85%), Positives = 179/192 (93%)
 Frame = -1

Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707
           MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPT+GPLRPIVHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPIVHG 60

Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527
           QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI+VDHRRRNRSLE LQANVQRLKT+K
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYK 120

Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347
           AKLVVFPRR  KFK+GDS++EELATATQV G  MPIV EKPTVELVK T+E+K+FKAY K
Sbjct: 121 AKLVVFPRRTRKFKAGDSSVEELATATQVQGLYMPIVREKPTVELVKVTDEMKSFKAYGK 180

Query: 346 LRIERVNKKHQG 311
           LR+ER+N++H G
Sbjct: 181 LRVERMNQRHVG 192


>ref|XP_002277094.1| PREDICTED: 60S ribosomal protein L13-1 [Vitis vinifera]
           gi|296087125|emb|CBI33499.3| unnamed protein product
           [Vitis vinifera]
          Length = 207

 Score =  337 bits (864), Expect = 3e-90
 Identities = 164/192 (85%), Positives = 178/192 (92%)
 Frame = -1

Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707
           MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPT+GPLRPIVHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPIVHG 60

Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527
           QTLKYNMKVRAGRGFSLEELK AGIPKKLAPTIGI+VDHRRRNRSLE LQANVQRLKT+K
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKVAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYK 120

Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347
           AKLVVFPRR  KFK+GDS++EELATATQV G  MPIV EKPTVELVK T+E+K+FKAY K
Sbjct: 121 AKLVVFPRRTRKFKAGDSSVEELATATQVQGLYMPIVREKPTVELVKVTDEMKSFKAYGK 180

Query: 346 LRIERVNKKHQG 311
           LR+ER+N++H G
Sbjct: 181 LRVERMNQRHVG 192


>ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|222857408|gb|EEE94955.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  336 bits (862), Expect = 5e-90
 Identities = 166/192 (86%), Positives = 177/192 (92%)
 Frame = -1

Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707
           MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPTAGPLRPIVHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527
           QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI+VDHRRRNRSLEGLQANVQRLKT+K
Sbjct: 61  QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQANVQRLKTYK 120

Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347
           AKLVVFPRRA KFK+GDS  EELATATQV G+ MPIV EKP VELVK TEE+K+F+AY K
Sbjct: 121 AKLVVFPRRARKFKAGDSAPEELATATQVQGQIMPIVLEKPCVELVKVTEEMKSFRAYDK 180

Query: 346 LRIERVNKKHQG 311
           LR+ER + +H G
Sbjct: 181 LRVERTSARHVG 192


>ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223531254|gb|EEF33097.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score =  335 bits (860), Expect = 8e-90
 Identities = 164/192 (85%), Positives = 179/192 (93%)
 Frame = -1

Query: 886 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKERRRNARQAKAVKIFPRPTAGPLRPIVHG 707
           MVKHNNV+PNGHFKKHWQNYVKTWFNQPARK RRR ARQ KAVKIFPRPTAGPLRPIVHG
Sbjct: 1   MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPIVHG 60

Query: 706 QTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTFK 527
           QTLKYNMK+RAGRGF+LEELKAAGIPKKLAPTIGI+VDHRR+NRSLEGLQANVQRLKT+K
Sbjct: 61  QTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYK 120

Query: 526 AKLVVFPRRAGKFKSGDSTLEELATATQVTGENMPIVGEKPTVELVKPTEELKAFKAYAK 347
           AKLVVFPRRA K K+GDS  EELATATQV G+ MPIV EKP+VELVK TEE+K+FKAY K
Sbjct: 121 AKLVVFPRRARKSKAGDSAPEELATATQVQGKYMPIVREKPSVELVKVTEEMKSFKAYDK 180

Query: 346 LRIERVNKKHQG 311
           LR+ER+N++H G
Sbjct: 181 LRVERMNQRHLG 192


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