BLASTX nr result

ID: Coptis21_contig00002980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002980
         (1271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   465   e-128
emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]   444   e-122
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   442   e-121
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115
ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115

>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  465 bits (1196), Expect = e-128
 Identities = 223/360 (61%), Positives = 269/360 (74%), Gaps = 7/360 (1%)
 Frame = -1

Query: 1061 MGNCLPTSPSNNL------LPIETVFKLPSQVPPWPQXXXXXXXXXXXXG-LEIRQISTF 903
            MGNCL  S ++++      L IET FKLP+ +P WP             G LE+ QIS+F
Sbjct: 1    MGNCLTVSSASDVSKKRKSLAIETSFKLPAPMPTWPPGEGFAGGTIDLGGGLEVCQISSF 60

Query: 902  QKVWATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQSDPSQGT 723
             KVWAT EGGPDNLGATFFEP P+P+ F MLGCY+QPN K LFGWVL GKD  ++P  G 
Sbjct: 61   TKVWATHEGGPDNLGATFFEPSPMPEEFCMLGCYSQPNKKPLFGWVLAGKDNTNNPLGGA 120

Query: 722  LKMPVDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCVHLD 543
            LK P+DY LVWSSES+K+K++GNGY+WLP PPDGY A G ++TN P KP L+K+RCV  D
Sbjct: 121  LKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYKAVGHVITNLPEKPSLDKIRCVRSD 180

Query: 542  LADLCEQDTWIWGTDTESNTSEVSVYGLRPTVRGTRALGVSIGTFTVQLTGVDTALSLSC 363
            L DLCE DTWIWG D  +N +  +VY L+P+ RG +AL VS+GTF  Q  G  ++LSL+C
Sbjct: 181  LTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQALAVSVGTFVAQNGGAASSLSLAC 240

Query: 362  LKSADSNFSCMPNLTQIKALVQAYSPSIYLHPDEIYMASSVNWFFNNGALLYKKGDESNP 183
            LK+  SN   MPNL Q+ ALVQAYSP +YLHPDE Y+ SSV+WFF NGALLY++G+ES P
Sbjct: 241  LKNISSNLYAMPNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNGALLYQQGEESKP 300

Query: 182  VSIDPNGSNLPQGGSNDGEYWLDLPVDEGARDEVMKGDLQSSTAYLHIKPMLGATFTDIS 3
            V+IDP GSNLPQGGSNDG YWLDLPVD  A++ V KGDLQ S  Y+HIKPMLGATFTDI+
Sbjct: 301  VNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKKGDLQDSMTYMHIKPMLGATFTDIA 360


>emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]
          Length = 913

 Score =  444 bits (1141), Expect = e-122
 Identities = 205/309 (66%), Positives = 245/309 (79%)
 Frame = -1

Query: 929 LEIRQISTFQKVWATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKD 750
           LE+ QIS+F KVWAT EGGPDNLGATFFEP P+P+ F MLGCY+QPN K LFGWVL GKD
Sbjct: 21  LEVCQISSFTKVWATHEGGPDNLGATFFEPSPMPEEFCMLGCYSQPNKKPLFGWVLAGKD 80

Query: 749 VQSDPSQGTLKMPVDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPL 570
             ++P  G LK P+DY LVWSSES+K+K++GNGY+WLP PPDGY A G ++TN P KP L
Sbjct: 81  NTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYKAVGHVITNLPEKPSL 140

Query: 569 EKVRCVHLDLADLCEQDTWIWGTDTESNTSEVSVYGLRPTVRGTRALGVSIGTFTVQLTG 390
           +K+RCV  DL DLCE DTWIWG D  +N +  +VY L+P+ RG +AL VS+GTF  Q  G
Sbjct: 141 DKIRCVRSDLTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQALAVSVGTFVAQNGG 200

Query: 389 VDTALSLSCLKSADSNFSCMPNLTQIKALVQAYSPSIYLHPDEIYMASSVNWFFNNGALL 210
             ++LSL+CLK+  SN   MPNL Q+ ALVQAYSP +YLHPDE Y+ SSV+WFF NGALL
Sbjct: 201 AASSLSLACLKNISSNLYAMPNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNGALL 260

Query: 209 YKKGDESNPVSIDPNGSNLPQGGSNDGEYWLDLPVDEGARDEVMKGDLQSSTAYLHIKPM 30
           Y++G+ES PV+IDP GSNLPQGGSNDG YWLDLPVD  A++ V KGDLQ S  Y+HIKPM
Sbjct: 261 YQQGEESKPVNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKKGDLQDSMTYMHIKPM 320

Query: 29  LGATFTDIS 3
           LGATFTDI+
Sbjct: 321 LGATFTDIA 329


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
            gi|223537142|gb|EEF38775.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 551

 Score =  442 bits (1136), Expect = e-121
 Identities = 209/355 (58%), Positives = 258/355 (72%), Gaps = 3/355 (0%)
 Frame = -1

Query: 1061 MGNCLP---TSPSNNLLPIETVFKLPSQVPPWPQXXXXXXXXXXXXGLEIRQISTFQKVW 891
            MGNCL     S     LPIET FKLPS +P WP             GL++ QIS+  KVW
Sbjct: 1    MGNCLSIKDVSKKRKTLPIETSFKLPSSLPKWPPGEGFGNGTIDLGGLQVCQISSLNKVW 60

Query: 890  ATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQSDPSQGTLKMP 711
            +T EGGPDN+GA+FFEP  IP GFFMLGCY Q N++ L+GWVL GKD     + G L+ P
Sbjct: 61   STQEGGPDNVGASFFEPSQIPQGFFMLGCYCQSNSRPLYGWVLAGKD----DAGGALEKP 116

Query: 710  VDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCVHLDLADL 531
            +DY LVWSSES+K+K++  GYIWLP  PDGY A GL++T+SP KP L+K+RCV  DL D 
Sbjct: 117  IDYTLVWSSESLKIKQDSIGYIWLPTAPDGYRAVGLVVTSSPEKPSLDKMRCVRSDLTDQ 176

Query: 530  CEQDTWIWGTDTESNTSEVSVYGLRPTVRGTRALGVSIGTFTVQLTGVDTALSLSCLKSA 351
            CE+D W+WG + +S+ +  +V+ LRP+ RGT+A+GV +GTF  Q    +   SL CLK+ 
Sbjct: 177  CEKDIWVWGPEKQSDPNGFNVFSLRPSNRGTQAMGVCVGTFVAQNGNDNNPASLVCLKNV 236

Query: 350  DSNFSCMPNLTQIKALVQAYSPSIYLHPDEIYMASSVNWFFNNGALLYKKGDESNPVSID 171
             +N SCMPN  QI+A+ QAYSP IY HPDE Y+ SSV+W+FNNGALLYK+G+ESNPV ++
Sbjct: 237  SNNLSCMPNENQIQAIFQAYSPWIYFHPDEEYLPSSVSWYFNNGALLYKQGEESNPVKVE 296

Query: 170  PNGSNLPQGGSNDGEYWLDLPVDEGARDEVMKGDLQSSTAYLHIKPMLGATFTDI 6
             NGSNLPQGG+NDG YWLDLPVDE A+D V KGDLQ +  YLHIKPM GATFTDI
Sbjct: 297  TNGSNLPQGGANDGVYWLDLPVDEKAKDRVKKGDLQETEVYLHIKPMFGATFTDI 351


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  421 bits (1081), Expect = e-115
 Identities = 207/380 (54%), Positives = 254/380 (66%), Gaps = 30/380 (7%)
 Frame = -1

Query: 1055 NCLPTSPSNNLLPIETVFKLPSQVPPWPQXXXXXXXXXXXXG------------------ 930
            +C   S    +LPI+  FKLP+ +P WP                                
Sbjct: 13   SCEGVSKKQKVLPIDASFKLPAPLPSWPPGRFLFLFPFWSFLPSLMLSHCLYRPANLVCG 72

Query: 929  ------------LEIRQISTFQKVWATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNN 786
                        L++ QIS+F KVWAT EGGPD+LGA+FFEP  +P GF MLGCY+QPNN
Sbjct: 73   GFGSGIIDLGDGLQVCQISSFNKVWATHEGGPDDLGASFFEPSQLPQGFSMLGCYSQPNN 132

Query: 785  KSLFGWVLVGKDVQSDPSQGTLKMPVDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGG 606
            +SL+GWVL G+D     +   LK P+DY LVWSSES+++K++G GYIWLP PPDGY A G
Sbjct: 133  RSLYGWVLAGRD----ETGSALKQPIDYTLVWSSESLQIKQDGVGYIWLPTPPDGYKALG 188

Query: 605  LILTNSPTKPPLEKVRCVHLDLADLCEQDTWIWGTDTESNTSEVSVYGLRPTVRGTRALG 426
             ++T SP KPPL K+RCV  DL + CE D+W+WG   ES+ +  +V+ L P+ RGT+A+G
Sbjct: 189  HVVTKSPQKPPLGKIRCVRSDLTEQCEFDSWVWGLGKESDLNGFNVFSLFPSNRGTQAMG 248

Query: 425  VSIGTFTVQLTGVDTALSLSCLKSADSNFSCMPNLTQIKALVQAYSPSIYLHPDEIYMAS 246
            V +GTF  Q T     +SLSCLK+  SN SCMPNL QIKA+ QAYSP IY HPDE Y+ S
Sbjct: 249  VCVGTFVAQKT-TTAPVSLSCLKNVVSNLSCMPNLDQIKAIFQAYSPWIYFHPDEEYLPS 307

Query: 245  SVNWFFNNGALLYKKGDESNPVSIDPNGSNLPQGGSNDGEYWLDLPVDEGARDEVMKGDL 66
            SV W+F NGALLY++G+ES PV I+ NGSNLPQGGSNDG YWLDLPV+EGA+D V KGDL
Sbjct: 308  SVEWYFVNGALLYERGEESKPVPIESNGSNLPQGGSNDGAYWLDLPVEEGAKDRVKKGDL 367

Query: 65   QSSTAYLHIKPMLGATFTDI 6
            Q S  YLHIKPM GA FTDI
Sbjct: 368  QDSRVYLHIKPMFGAAFTDI 387


>ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|222866459|gb|EEF03590.1|
            predicted protein [Populus trichocarpa]
          Length = 546

 Score =  421 bits (1081), Expect = e-115
 Identities = 208/353 (58%), Positives = 249/353 (70%), Gaps = 1/353 (0%)
 Frame = -1

Query: 1061 MGNCLPTSPSNNLLPIETVFKLPSQVPPWPQXXXXXXXXXXXXG-LEIRQISTFQKVWAT 885
            MGN   TS +   LPI T FKLPS +P  PQ              L++ Q+ +  K+WAT
Sbjct: 1    MGN--GTSATKEALPIATPFKLPSPLPSLPQGEGFGNGIINLGSGLQVCQVVSLNKIWAT 58

Query: 884  LEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQSDPSQGTLKMPVD 705
             EGGPDNLGATFFEP  +P GF MLGCY+QPNN+ L GWVL GKD   +     L  PVD
Sbjct: 59   NEGGPDNLGATFFEPSQMPQGFSMLGCYSQPNNRMLHGWVLAGKDETGE----ALTKPVD 114

Query: 704  YRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCVHLDLADLCE 525
            Y LVWSSES+++K+EG GYIWLP P DGY A G ++T SP KP LEKVRCV  DL D C+
Sbjct: 115  YTLVWSSESLQIKQEGVGYIWLPTPLDGYKALGCVVTTSPEKPSLEKVRCVRSDLTDDCQ 174

Query: 524  QDTWIWGTDTESNTSEVSVYGLRPTVRGTRALGVSIGTFTVQLTGVDTALSLSCLKSADS 345
             D WIWG   ES+ +  +V+ LRP+ RGT+A+GVS+GTF  Q T    ++SL+CLK+ +S
Sbjct: 175  IDKWIWGQGKESDPNGFNVFSLRPSNRGTQAMGVSVGTFVAQNT-TSASISLACLKNIES 233

Query: 344  NFSCMPNLTQIKALVQAYSPSIYLHPDEIYMASSVNWFFNNGALLYKKGDESNPVSIDPN 165
            N SCMP L Q++A+ QAYSP IY HPDE Y+ SS  W+F NGALLYKK +ES PV I+  
Sbjct: 234  NLSCMPTLDQVQAIFQAYSPRIYFHPDEEYLPSSARWYFTNGALLYKKDEESKPVPIEST 293

Query: 164  GSNLPQGGSNDGEYWLDLPVDEGARDEVMKGDLQSSTAYLHIKPMLGATFTDI 6
            GSNLPQGGSNDG YWLDLPV+E AR+ V +GDLQ    YLHIKPMLGATFTDI
Sbjct: 294  GSNLPQGGSNDGSYWLDLPVEEAARERVKRGDLQDCQVYLHIKPMLGATFTDI 346


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