BLASTX nr result

ID: Coptis21_contig00002977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002977
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525991.1| PREDICTED: uncharacterized protein LOC100803...    81   5e-13
ref|XP_002300422.1| predicted protein [Populus trichocarpa] gi|2...    74   6e-11
ref|NP_565715.1| uncharacterized protein [Arabidopsis thaliana] ...    71   7e-10
emb|CBI20211.3| unnamed protein product [Vitis vinifera]               70   1e-09
ref|XP_002525120.1| hypothetical protein RCOM_0553590 [Ricinus c...    68   4e-09

>ref|XP_003525991.1| PREDICTED: uncharacterized protein LOC100803672 [Glycine max]
          Length = 533

 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 11/261 (4%)
 Frame = -2

Query: 1098 MDFKLKGMKWVGNVCQKLEIMFEEVEEKLCQDA-KFVESQVETVGVNVNKFFAGIVHDFL 922
            MD K++ +KWVGN+ QK E + +EV++ + QDA K++E+QV+ VG +V KF++G+VH+ L
Sbjct: 1    MDLKIQHIKWVGNIYQKFEAVCQEVDDIVGQDAVKYLENQVQNVGDSVKKFYSGVVHELL 60

Query: 921  P-PSCTPPAHEIDSGSSVVKNGISRDHLEG---NPSDKDYRVSGSSMENSCQSSKSIEDC 754
            P P+     +E  S +     G   + + G   N   +D     +++  S Q S +I+  
Sbjct: 61   PFPTSADSKYESHSVALTNNIGFPVESVVGHKDNNKKRDEENPTNNVIKSLQESSAIDIA 120

Query: 753  NIKDGDLLLPSSVDLIGGAGGLEITLDENYILKIS-KPTSEEEDSEKIEKHPPCLSDV-- 583
            N  +  + +P    LI       + ++++YI +      S E    K EK    + +V  
Sbjct: 121  N--NQQVGVPIKHKLIDETCSDSLEVEDSYITQEEVGDDSRETSGAKKEKLNTSIEEVSV 178

Query: 582  --VAPIGNQASLSSSSHNTIHIDPEASLNPAKGIGSNSTVKEDE-DIRIHELSCLGLEGN 412
              V    N  SL         I  E+  + +     +S  K+D  D+ + + SCL +E N
Sbjct: 179  ESVPKSMNLMSLREKESLEFPIHSESYSDSSDSGCEDSIAKKDNIDVTVEQNSCLVVEKN 238

Query: 411  TVCVEPPSSIFTEISNEGHEN 349
             +     S + +  S +G E+
Sbjct: 239  AM-NSSTSEVLSSQSLDGEES 258


>ref|XP_002300422.1| predicted protein [Populus trichocarpa] gi|222847680|gb|EEE85227.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score = 74.3 bits (181), Expect = 6e-11
 Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
 Frame = -2

Query: 1098 MDFKLKGMKWVGNVCQKLEIMFEEVEEKLCQDA-KFVESQVETVGVNVNKFFAGIVHDFL 922
            MD + KGM W GN+ QK E M  EV+  + +DA KFVE+QV +VG N+ K ++  VHD +
Sbjct: 1    MDLRSKGMAWAGNIYQKFETMCHEVDNVVNKDAFKFVENQVHSVGENMKKIYSDAVHDLI 60

Query: 921  PPSCTPPAHEIDS----GSSVVKN--GISRDHLEGNPSDKDYRVSGSSMENSCQSSKSIE 760
            PP   P   E  +    G+ ++K   GI  DH   + +       G     + Q  K + 
Sbjct: 61   PPLVDPAKCEAPAAATIGAYIIKTVIGIEDDHEYASRAKHSPAELGDHDPMTKQLGKDVW 120

Query: 759  DCNIKDGDLLLPSSVDLIGGAGGLEITLDENYILKISKPTSEEEDSEK 616
            +  + +   +  +S + I GA   E  L  + +   +   S EE+S K
Sbjct: 121  ELQVANQLTITGNSEETIEGAES-ESALGVDDVTTETSDVSTEENSVK 167


>ref|NP_565715.1| uncharacterized protein [Arabidopsis thaliana]
            gi|16612317|gb|AAL27517.1|AF439849_1 At2g31130/T16B12.6
            [Arabidopsis thaliana] gi|20197328|gb|AAC63838.2|
            expressed protein [Arabidopsis thaliana]
            gi|23506163|gb|AAN31093.1| At2g31130/T16B12.6
            [Arabidopsis thaliana] gi|330253402|gb|AEC08496.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 419

 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -2

Query: 1098 MDFKLKGMKWVGNVCQKLEIMFEEVEEKLCQD-AKFVESQVETVGVNVNKFFAGIVHDFL 922
            MDFK  G+KWVGNV QK E M  EVEE + QD AK+VE+QV+TVG +V KF + +VHD L
Sbjct: 1    MDFK--GIKWVGNVYQKFEAMCLEVEEIIVQDTAKYVENQVQTVGNSVKKFCSDVVHDLL 58

Query: 921  PPSCTPPAHEIDSG 880
            P         +DSG
Sbjct: 59   PD------ESVDSG 66


>emb|CBI20211.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 31/298 (10%)
 Frame = -2

Query: 1107 MFDMDFKLKGMKWVGNVCQKLEIMFEEVEEKLCQD-AKFVESQVETVGVNVNKFFAGIVH 931
            M  MD K KG+ WVGN+ QK E + +EV+  + QD  K+VE+QV+T   ++ KF + +V 
Sbjct: 1    MSAMDLKFKGIAWVGNIYQKFEAICQEVDNIVSQDPVKYVENQVQTGCESMKKFCSDVVQ 60

Query: 930  DFLPPSCTPPAHEIDSGSSVVKNGISRDHLEGNPSDKDYRVSGSSMENSCQSSKSIEDCN 751
            + LP S  P  HE D    + +N  +R +++    ++    S S  EN         D +
Sbjct: 61   ELLPSSVDPVEHE-DEAVPLKQNDENRTYIKSLTGEE---FSLSLGENGDVPINENPDVD 116

Query: 750  IKDG-DLLLPSSVDLIGGAGGLEITLDENYILKISKPTSEEEDSEKIEKHPPCLSDVVAP 574
            +++      PSS  ++G     E  L E  +            SE ++K+     D V  
Sbjct: 117  VEENFKKEKPSSHQVLGLNSCGEKDLCEPSL-----------SSEYVDKNHENAQDPVKH 165

Query: 573  IGNQASLSSSSHNTIHIDP-----EASLNPAKGIGSNSTVKEDEDIRIHELSCLGLEGNT 409
            + NQ      S      D        S++P +       +K++++ R +  S  G+E N 
Sbjct: 166  VENQVQTGGESMKKFCSDVVQELLTPSVDPVEHEAEAVPLKQNDENRTYIKSLTGIEENL 225

Query: 408  VCVEPPS------------------------SIFTEISNEGHENACECEQFSVRLEEN 307
            V  +                            +  E+  E   N+ E E+FS+ L EN
Sbjct: 226  VDTDAKELPVDLDAIGPMENAWADGLSFSELHLIVELMPELSMNSIEGEEFSLSLVEN 283


>ref|XP_002525120.1| hypothetical protein RCOM_0553590 [Ricinus communis]
            gi|223535579|gb|EEF37247.1| hypothetical protein
            RCOM_0553590 [Ricinus communis]
          Length = 490

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = -2

Query: 1086 LKGMKWVGNVCQKLEIMFEEVEEKLCQDA-KFVESQVETVGVNVNKFFAGIVHDFLPPSC 910
            LKG+ WVGN+ QK E M  EVEE + QD  K+VE+QV+TVG +V +F++ ++ D LPPS 
Sbjct: 3    LKGISWVGNIYQKFEAMCLEVEEVMYQDTVKYVENQVQTVGSSVKRFYSDVMQDLLPPSS 62

Query: 909  TPPA 898
               A
Sbjct: 63   VDAA 66


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