BLASTX nr result

ID: Coptis21_contig00002971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002971
         (2137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  616   e-174
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   614   e-173
ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|2...   585   e-164
ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...   583   e-164
ref|XP_002298206.1| predicted protein [Populus trichocarpa] gi|2...   572   e-160

>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  616 bits (1588), Expect = e-174
 Identities = 324/478 (67%), Positives = 367/478 (76%), Gaps = 17/478 (3%)
 Frame = +3

Query: 354  AQFQAHQIPQLQQMSE--DMKMRQVMGFKQGMAPQHHSAGQRTTYHHPQLKPGAQFXXXX 527
            AQ   HQ+PQL QM++  D+K+RQ M  K G+  QH ++GQR+ Y H  LKPGAQF    
Sbjct: 928  AQLPTHQMPQLNQMNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFPISS 987

Query: 528  XXXXXXXXXX---HFSPQIDQQNLLTSFPKSGTPLQSANSLFIVPSPSTPFALSPIPWDS 698
                         H SPQ+DQQNLL S  KSGTPLQS NS F+VPSPSTP A SP+P DS
Sbjct: 988  PQLLQTASPQIPQHSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGDS 1047

Query: 699  EKQASSISSLSNTGHVGHPQPTAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG----- 863
            EK  S ISSLSN G++GH Q T+  A A SLAIGTPGISASPLLAEFT  D   G     
Sbjct: 1048 EKPISGISSLSNAGNIGHQQTTSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTA 1107

Query: 864  -------TEQPLERLLKAVKAISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGED 1022
                   TEQPLERL+KAVK++SPKA SASVSDIGSV+SMIDRIAGSAPGNGSRAAVGED
Sbjct: 1108 ISIKASVTEQPLERLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGED 1167

Query: 1023 LVAMTKCRMQARNFISQDGVSATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSDLE 1202
            LVAMTKCR+QARNFI+QDG S  +KMRR TSAMPL+ VSSAGS+NDS KQ    E SDLE
Sbjct: 1168 LVAMTKCRLQARNFITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLE 1227

Query: 1203 STATSRIKRPRVEANHALLEEIKEINQRLIDTVVDISDEDVDPTXXXXXXEGGQGIIVKC 1382
            STATS IKRPR+EANHALLEEI+EINQRLIDTVVDISDED DPT      EGG+G +VKC
Sbjct: 1228 STATSSIKRPRMEANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKC 1287

Query: 1383 SFNAVSLSPNLKTQYASAQMTPIQPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSVKT 1562
            SF+AV+LSPNLK+QYASAQM+PIQPL+LL+PTNYPNCSP+LLDK P+++SKE EDLSVK 
Sbjct: 1288 SFSAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKA 1347

Query: 1563 XXXXXXXXXXXXQPMSLKEMVRTWDICARAVISDYAQQHGGGSFSSRYGTWEKCVSAA 1736
                        QPMSL E+ RTWD+CAR VIS+YAQQ GGGSFSS+YGTWE C+SAA
Sbjct: 1348 KSRFSISLRSLSQPMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSAA 1405


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score =  614 bits (1584), Expect = e-173
 Identities = 323/478 (67%), Positives = 371/478 (77%), Gaps = 17/478 (3%)
 Frame = +3

Query: 354  AQFQAHQIPQLQQMSE--DMKMRQVMGFKQGMAPQHHSAGQRTTYHHPQLKPGAQFXXXX 527
            AQ QAHQ+PQ+ QM++  D+K+R  MG K G+  QH SAGQRTTY H Q+KPGA F    
Sbjct: 905  AQMQAHQMPQVHQMNDVNDLKIRPGMGVKPGVFQQHLSAGQRTTYPHQQMKPGASFPISS 964

Query: 528  XXXXXXXXXX---HFSPQIDQQNLLTSFPKSGTPLQSANSLFIVPSPSTPFALSPIPWDS 698
                         H SPQIDQQNLL+S  K+GTPLQSANS F+V SPSTP A SP+P DS
Sbjct: 965  PQLLQAASPQLTQHSSPQIDQQNLLSSLTKTGTPLQSANSPFVVQSPSTPLAPSPMPGDS 1024

Query: 699  EKQASSISSLSNTGHVGHPQPTAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG----- 863
            EK  + ISSLSN G++G  Q T   AP  SLAIGTPGISASPLLAEFT +D         
Sbjct: 1025 EKPITGISSLSNAGNIGQQQATVAQAPVPSLAIGTPGISASPLLAEFTGSDVGLANTLTT 1084

Query: 864  -------TEQPLERLLKAVKAISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGED 1022
                   TEQPLERL+KAVK++SPKA SASVSDIGSV+SMIDRIA SAPGNGSRAAVGED
Sbjct: 1085 ASGKSTVTEQPLERLIKAVKSMSPKALSASVSDIGSVVSMIDRIASSAPGNGSRAAVGED 1144

Query: 1023 LVAMTKCRMQARNFISQDGVSATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSDLE 1202
            LVAMT CR+QARNFI+QDG+S T+KMRR TSAMPLN VSSA S++DS KQ N  E S+LE
Sbjct: 1145 LVAMTNCRLQARNFITQDGMSGTRKMRRYTSAMPLNVVSSASSISDSFKQFNGAETSELE 1204

Query: 1203 STATSRIKRPRVEANHALLEEIKEINQRLIDTVVDISDEDVDPTXXXXXXEGGQGIIVKC 1382
            STATS +KRPR+EANHALLEEI+EINQRLIDTVVDIS+EDVDPT       GG+G IVKC
Sbjct: 1205 STATSSVKRPRLEANHALLEEIREINQRLIDTVVDISEEDVDPTAGAATAGGGEGTIVKC 1264

Query: 1383 SFNAVSLSPNLKTQYASAQMTPIQPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSVKT 1562
            SF+AV+LSPNLK+QYASAQM+PIQPL+LL+PTNYPNCSP+LLDKLP+++SKE EDLSVK 
Sbjct: 1265 SFSAVALSPNLKSQYASAQMSPIQPLRLLVPTNYPNCSPILLDKLPVEVSKEYEDLSVKA 1324

Query: 1563 XXXXXXXXXXXXQPMSLKEMVRTWDICARAVISDYAQQHGGGSFSSRYGTWEKCVSAA 1736
                        QPMSL E+ RTWD+CARAVIS++AQQ GGGSFSS+YGTWE C+SAA
Sbjct: 1325 KSRFNISLRSLSQPMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSAA 1382


>ref|XP_002327402.1| predicted protein [Populus trichocarpa] gi|222835956|gb|EEE74377.1|
            predicted protein [Populus trichocarpa]
          Length = 1204

 Score =  585 bits (1509), Expect = e-164
 Identities = 307/475 (64%), Positives = 360/475 (75%), Gaps = 14/475 (2%)
 Frame = +3

Query: 354  AQFQAHQIPQLQQMSEDMKMRQVMGFKQGMAPQHHSAGQRTTYHHPQLKPGAQFXXXXXX 533
            AQ Q HQIPQ QQM++  +MRQ +G K  +  QH    QRT +    +KP   F      
Sbjct: 731  AQMQTHQIPQPQQMNDVNEMRQGIGIKPAVFQQHLPTAQRTAFPRQHMKPAPSFPISSPQ 790

Query: 534  XXXXXXXX--HFSPQIDQQNLLTSFPKSGTPLQSANSLFIVPSPSTPFALSPIPWDSEKQ 707
                      H SPQIDQQNL +S  K+GTPLQSANS F+VPSPSTP A SP+P DS+K 
Sbjct: 791  LPQHASPQLQHSSPQIDQQNLPSSVTKTGTPLQSANSPFVVPSPSTPLAPSPMPGDSDKP 850

Query: 708  ASSISSLSNTGHVGHPQPTAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG-------- 863
             S ISSL NTG++ H QP+   APA SLAIGTPGISASPLLAEFT+ D   G        
Sbjct: 851  VSGISSLLNTGNIVH-QPSVAQAPAPSLAIGTPGISASPLLAEFTSPDGAHGGALTTVSG 909

Query: 864  ----TEQPLERLLKAVKAISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGEDLVA 1031
                TEQPLERL+KAVK++SPKA SASV DIGSV+SMIDRIAGSAPGNGSRAA GEDLVA
Sbjct: 910  KSNVTEQPLERLIKAVKSLSPKALSASVGDIGSVVSMIDRIAGSAPGNGSRAAAGEDLVA 969

Query: 1032 MTKCRMQARNFISQDGVSATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSDLESTA 1211
            MTKCR+QARN+I+QDG++ ++KMRR TSAMPLN VSSAGSV+DS KQ    E SDLESTA
Sbjct: 970  MTKCRLQARNYITQDGMTGSRKMRRHTSAMPLNVVSSAGSVSDSFKQFTGPETSDLESTA 1029

Query: 1212 TSRIKRPRVEANHALLEEIKEINQRLIDTVVDISDEDVDPTXXXXXXEGGQGIIVKCSFN 1391
            TS +KRPR+EANHALLEEI+EINQRLIDTVVDISDEDVD T      EGG+G IVKCSF+
Sbjct: 1030 TSSVKRPRIEANHALLEEIREINQRLIDTVVDISDEDVDSTAVAATAEGGEGTIVKCSFS 1089

Query: 1392 AVSLSPNLKTQYASAQMTPIQPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSVKTXXX 1571
            AV+LS NLK+QYASAQM+PIQPL+LL+PTNYP+CSP+LLD+ P+++SKE EDLS+K    
Sbjct: 1090 AVALSQNLKSQYASAQMSPIQPLRLLVPTNYPSCSPILLDRFPVEVSKEYEDLSIKAKSR 1149

Query: 1572 XXXXXXXXXQPMSLKEMVRTWDICARAVISDYAQQHGGGSFSSRYGTWEKCVSAA 1736
                     QPMSL E+ RTWD+CAR VIS++AQQ GGG+FSS+YG+WE C+SAA
Sbjct: 1150 FSISLRSLSQPMSLGEIARTWDVCARVVISEHAQQSGGGTFSSKYGSWENCLSAA 1204


>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score =  583 bits (1503), Expect = e-164
 Identities = 318/480 (66%), Positives = 357/480 (74%), Gaps = 19/480 (3%)
 Frame = +3

Query: 354  AQFQAHQIPQLQQMSE--DMKMRQVMGF-KQGMAPQHHSAGQRTTYHHPQLKPGAQFXXX 524
            AQ QAHQ+ Q  QM++  D+KMRQ M   K G+  QH  A QR+ Y   QLK G  F   
Sbjct: 1193 AQLQAHQMSQPHQMNDVNDLKMRQGMSANKPGVFHQHQGAVQRSAYPQ-QLKSGTSFPIS 1251

Query: 525  XXXXXXXXXXX---HFSPQIDQQNLLTSFPKSGTPLQSANSLFIVPSPSTPFALSPIPWD 695
                          H SPQIDQQNLLTS  K+GTPLQSANS F+VPSPSTP A SP+P +
Sbjct: 1252 SPQLLQTASPQIPQHSSPQIDQQNLLTSLTKAGTPLQSANSPFVVPSPSTPLAPSPMPGE 1311

Query: 696  SEKQASSISSLSNTGHVGHPQPTAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG---- 863
            SEK  S IS ++N G++GH Q T  LAP  SLAIGTPGISASPLLAEFT+ D N G    
Sbjct: 1312 SEKLNSGISLITNAGNIGHHQTTGALAPPPSLAIGTPGISASPLLAEFTSLDGNHGNAST 1371

Query: 864  --------TEQPLERLLKAVKAISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGE 1019
                    TEQPLERL+K VK +SPKA SASVSDIGSV+SMIDRIAGSAPGNGSRAAVGE
Sbjct: 1372 MVSGKSSVTEQPLERLIKVVKLMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGE 1431

Query: 1020 DLVAMTKCRMQARNFISQDGVSATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSDL 1199
            DLVAMTKCR+QARNFI+ DG + T+KMRR TSAMPLN VSSAGSVNDS KQ    E SDL
Sbjct: 1432 DLVAMTKCRLQARNFITLDGAAGTRKMRRYTSAMPLNVVSSAGSVNDSFKQLAGSETSDL 1491

Query: 1200 ESTATSRIKRPRVEANHALLEEIKEINQRLIDTVVDISDEDVDP-TXXXXXXEGGQGIIV 1376
            ESTATS  KRPR+E NHALLEEI+EINQRLIDTVVDIS EDVDP        EGG+G IV
Sbjct: 1492 ESTATSSAKRPRIEVNHALLEEIREINQRLIDTVVDISHEDVDPAAAAAAAAEGGEGTIV 1551

Query: 1377 KCSFNAVSLSPNLKTQYASAQMTPIQPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSV 1556
            KCSF+AV+LSPNLK+QY S QM+PIQPL+LL+PTNYPN SP+LLDK P+++SKE EDLSV
Sbjct: 1552 KCSFSAVALSPNLKSQYTSTQMSPIQPLRLLVPTNYPNSSPILLDKFPVEISKEYEDLSV 1611

Query: 1557 KTXXXXXXXXXXXXQPMSLKEMVRTWDICARAVISDYAQQHGGGSFSSRYGTWEKCVSAA 1736
            K             QPMSL E+ RTWD+CARAVIS+YAQQ GGGSFSSRYG WE C+SAA
Sbjct: 1612 KAKSRFSISLRSLSQPMSLGEIARTWDVCARAVISEYAQQSGGGSFSSRYGAWENCLSAA 1671


>ref|XP_002298206.1| predicted protein [Populus trichocarpa] gi|222845464|gb|EEE83011.1|
            predicted protein [Populus trichocarpa]
          Length = 772

 Score =  572 bits (1475), Expect = e-160
 Identities = 307/478 (64%), Positives = 352/478 (73%), Gaps = 17/478 (3%)
 Frame = +3

Query: 354  AQFQAHQIPQLQQMSE--DMKMRQVMGFKQGMAPQHHSAGQRTTYHHPQLKPGAQFXXXX 527
            AQ Q  QIPQ  QM++  +MK+RQ +G K  +  QH S GQRT + H Q+KPG+ F    
Sbjct: 301  AQMQTQQIPQPHQMNDVNEMKLRQGIGIKPAVFQQHLSTGQRTAFPHQQMKPGSSFPISS 360

Query: 528  XXXXXXXXXX---HFSPQIDQQNLLTSFPKSGTPLQSANSLFIVPSPSTPFALSPIPWDS 698
                         H SPQIDQQNLL S  K+GTPLQSANS F+VPSPSTP A SP+P DS
Sbjct: 361  PQMLQHASPQLQQHSSPQIDQQNLLPSLTKTGTPLQSANSPFVVPSPSTPLAPSPVPGDS 420

Query: 699  EKQASSISSLSNTGHVGHPQPTAVLAPAHSLAIGTPGISASPLLAEFTTTDANQG----- 863
            EK  S ISS  N  H    QPT   A A SLAIGTPGISASPLLAEFT+ D   G     
Sbjct: 421  EKPISGISS--NIVH----QPTVAQATAPSLAIGTPGISASPLLAEFTSPDGAHGGALTT 474

Query: 864  -------TEQPLERLLKAVKAISPKAFSASVSDIGSVISMIDRIAGSAPGNGSRAAVGED 1022
                    EQPLER++KAVK++SPKA SASVSDIGSV+SMIDRIAGSAPGNGSRAAVGED
Sbjct: 475  VSGKSNVMEQPLERMIKAVKSLSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGED 534

Query: 1023 LVAMTKCRMQARNFISQDGVSATKKMRRDTSAMPLNAVSSAGSVNDSLKQSNVLEMSDLE 1202
            LVAMTKCR+QARNF +QDG++ +KKMRR TSAMPLN  SSAGSV+DS KQ    E SDLE
Sbjct: 535  LVAMTKCRLQARNFFTQDGMTGSKKMRRHTSAMPLNVASSAGSVSDSFKQFTGPETSDLE 594

Query: 1203 STATSRIKRPRVEANHALLEEIKEINQRLIDTVVDISDEDVDPTXXXXXXEGGQGIIVKC 1382
            ST TS +KRP++EANHALLEEI+EINQRL+DTVVDISDEDVD T      EGG G  VKC
Sbjct: 595  STVTSSVKRPKIEANHALLEEIREINQRLLDTVVDISDEDVDSTAAAAAAEGGGGTFVKC 654

Query: 1383 SFNAVSLSPNLKTQYASAQMTPIQPLQLLIPTNYPNCSPVLLDKLPIDLSKENEDLSVKT 1562
            SF AV+LSPNLK QY SAQM+ IQPL+LL+PTNYPNCSP+LLDK P ++SKE EDLS+K 
Sbjct: 655  SFIAVALSPNLKAQYTSAQMSTIQPLRLLVPTNYPNCSPILLDKFPFEVSKEYEDLSIKA 714

Query: 1563 XXXXXXXXXXXXQPMSLKEMVRTWDICARAVISDYAQQHGGGSFSSRYGTWEKCVSAA 1736
                        QPMSL ++ RTWD+CA AVIS++AQQ GGG+FSS+YG+WE CVSAA
Sbjct: 715  KFRFSISLRSLSQPMSLGDIARTWDVCAHAVISEHAQQSGGGTFSSKYGSWENCVSAA 772


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