BLASTX nr result

ID: Coptis21_contig00002963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002963
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530278.1| lipid binding protein, putative [Ricinus com...   136   6e-30
ref|NP_974989.1| Non-specific lipid-transfer protein-like protei...   135   1e-29
ref|NP_568984.1| Non-specific lipid-transfer protein-like protei...   135   1e-29
ref|NP_001242557.1| uncharacterized protein LOC100810408 precurs...   135   1e-29
ref|XP_003615638.1| Non-specific lipid-transfer protein [Medicag...   135   2e-29

>ref|XP_002530278.1| lipid binding protein, putative [Ricinus communis]
           gi|223530210|gb|EEF32118.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 187

 Score =  136 bits (343), Expect = 6e-30
 Identities = 71/135 (52%), Positives = 94/135 (69%), Gaps = 16/135 (11%)
 Frame = +3

Query: 156 SLIYCVVALWCVLCVNCATK----TAPAPAQ--------DCSTVILTMADCLSFVTSGST 299
           S + C+ ++W V+ VN AT     TAPAPAQ        DCST++L MADCLS+V++ ST
Sbjct: 7   SAVLCIFSIWAVVAVNGATPHHAATAPAPAQAPASSSGVDCSTLVLNMADCLSYVSNDST 66

Query: 300 VKKPEGGCCTGLKTVLKTAPDCLCQTFKSSGQLGIALDMQKAMTLPSACGVKAPPSIATC 479
             KPE  CC+GLKTVLKT   CLC+ FKSS QLG+ L++ KA++LPSAC + A PS++ C
Sbjct: 67  TTKPEKTCCSGLKTVLKTDAQCLCEAFKSSAQLGVVLNVTKALSLPSACKIHA-PSVSNC 125

Query: 480 TLSV----APGASPA 512
            L++    APGASP+
Sbjct: 126 GLALTPAGAPGASPS 140


>ref|NP_974989.1| Non-specific lipid-transfer protein-like protein [Arabidopsis
           thaliana] gi|332010455|gb|AED97838.1| Non-specific
           lipid-transfer protein-like protein [Arabidopsis
           thaliana]
          Length = 178

 Score =  135 bits (341), Expect = 1e-29
 Identities = 66/98 (67%), Positives = 77/98 (78%)
 Frame = +3

Query: 216 TAPAPAQDCSTVILTMADCLSFVTSGSTVKKPEGGCCTGLKTVLKTAPDCLCQTFKSSGQ 395
           TAPAP+ DCST+IL MADCLSFV+SG TV KPEG CC+GLKTVLK    CLC+ FKSS  
Sbjct: 35  TAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSAS 94

Query: 396 LGIALDMQKAMTLPSACGVKAPPSIATCTLSVAPGASP 509
           LG+ L++ KA TLP+AC + A PSIATC LSVAP  +P
Sbjct: 95  LGVTLNITKASTLPAACKLHA-PSIATCGLSVAPSTAP 131


>ref|NP_568984.1| Non-specific lipid-transfer protein-like protein [Arabidopsis
           thaliana] gi|75161488|sp|Q8VYI9.1|NLTL5_ARATH RecName:
           Full=Non-specific lipid-transfer protein-like protein
           At5g64080; Flags: Precursor gi|17979494|gb|AAL50083.1|
           AT5g64080/MHJ24_6 [Arabidopsis thaliana]
           gi|20147301|gb|AAM10364.1| AT5g64080/MHJ24_6
           [Arabidopsis thaliana] gi|332010454|gb|AED97837.1|
           Non-specific lipid-transfer protein-like protein
           [Arabidopsis thaliana]
          Length = 182

 Score =  135 bits (341), Expect = 1e-29
 Identities = 66/98 (67%), Positives = 77/98 (78%)
 Frame = +3

Query: 216 TAPAPAQDCSTVILTMADCLSFVTSGSTVKKPEGGCCTGLKTVLKTAPDCLCQTFKSSGQ 395
           TAPAP+ DCST+IL MADCLSFV+SG TV KPEG CC+GLKTVLK    CLC+ FKSS  
Sbjct: 35  TAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSAS 94

Query: 396 LGIALDMQKAMTLPSACGVKAPPSIATCTLSVAPGASP 509
           LG+ L++ KA TLP+AC + A PSIATC LSVAP  +P
Sbjct: 95  LGVTLNITKASTLPAACKLHA-PSIATCGLSVAPSTAP 131


>ref|NP_001242557.1| uncharacterized protein LOC100810408 precursor [Glycine max]
           gi|255633690|gb|ACU17205.1| unknown [Glycine max]
          Length = 191

 Score =  135 bits (340), Expect = 1e-29
 Identities = 70/126 (55%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
 Frame = +3

Query: 150 KASLIYCVVALWCVLCV-----NCATKTAPAPAQDCSTVILTMADCLSFVTSGSTVKKPE 314
           K +LI  VVA  C + +     + ++  APAP+ DCS ++LTMADCLS VT+GSTV  PE
Sbjct: 4   KLTLIALVVAALCAVDLTQRASSSSSPHAPAPSVDCSNLVLTMADCLSLVTNGSTVTMPE 63

Query: 315 GGCCTGLKTVLKTAPDCLCQTFKSSGQLGIALDMQKAMTLPSACGVKAPPSIATCTLSVA 494
           G CC+GLK+VLKTAP CLC+ FKSS Q G+ L++ KA TLP+AC V A PS   C LS  
Sbjct: 64  GTCCSGLKSVLKTAPACLCEAFKSSAQFGVVLNVTKATTLPAACKVSA-PSATNCGLSET 122

Query: 495 PGASPA 512
           P A+PA
Sbjct: 123 PAAAPA 128


>ref|XP_003615638.1| Non-specific lipid-transfer protein [Medicago truncatula]
           gi|355516973|gb|AES98596.1| Non-specific lipid-transfer
           protein [Medicago truncatula]
           gi|388508024|gb|AFK42078.1| unknown [Medicago
           truncatula]
          Length = 190

 Score =  135 bits (339), Expect = 2e-29
 Identities = 71/125 (56%), Positives = 89/125 (71%), Gaps = 4/125 (3%)
 Frame = +3

Query: 150 KASLIYCVVALWCVLCVNCA-TKTAPAPAQDCSTVILTMADCLSFVTSGSTVKKPEGGCC 326
           K SLI  V+A+W +     A T  APAP+ DC+ ++LTMADCLSFVT+GST  KPEG CC
Sbjct: 4   KLSLILFVLAIWTLDSSQGALTHQAPAPSVDCTNLVLTMADCLSFVTNGSTTTKPEGTCC 63

Query: 327 TGLKTVLKTAPDCLCQTFKSSGQLGIALDMQKAMTLPSACGVKAPPSIATCTLS---VAP 497
           +GLK+VLKTAP CLC+ FKSS Q G+ L++ KA +LP+AC V A PS   C LS    AP
Sbjct: 64  SGLKSVLKTAPSCLCEAFKSSAQFGVVLNVTKATSLPAACKVSA-PSATKCGLSEVTEAP 122

Query: 498 GASPA 512
            ++PA
Sbjct: 123 ASAPA 127


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