BLASTX nr result

ID: Coptis21_contig00002960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002960
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   120   9e-26
ref|XP_004173141.1| PREDICTED: uncharacterized LOC101210176, par...   114   1e-23
ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like ...   114   1e-23
ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...   113   2e-23
ref|XP_002534298.1| conserved hypothetical protein [Ricinus comm...   112   3e-23

>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
            gi|297745068|emb|CBI38660.3| unnamed protein product
            [Vitis vinifera]
          Length = 1036

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/115 (54%), Positives = 85/115 (73%)
 Frame = +1

Query: 1    ALCKTAVLLHFRSSEQPAIKVMRGLLNRVIESVLQDKELVKDLKRLAARLEALDEHPDQN 180
            ALC+  VLLHFR SEQ AIK+MR LLNRV ES   ++E+VK+LKR+A RL+A+D  PDQ 
Sbjct: 858  ALCRVLVLLHFRLSEQGAIKLMRRLLNRVAESAFAEREVVKELKRMAERLKAIDREPDQE 917

Query: 181  LSPDQADLVLGRLELEEDLGMDVLTAELQTPVPCSTRPSRSRKRVIRQEASSDED 345
            LS +QA+ +LGRLEL+ +  +D       TPV  S+RP+R+R+ V  QE+SS+E+
Sbjct: 918  LSQEQANCILGRLELDLNFDVDDSMEIQPTPVSRSSRPARTRQGVRNQESSSEEE 972


>ref|XP_004173141.1| PREDICTED: uncharacterized LOC101210176, partial [Cucumis sativus]
          Length = 196

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/114 (53%), Positives = 82/114 (71%)
 Frame = +1

Query: 1   ALCKTAVLLHFRSSEQPAIKVMRGLLNRVIESVLQDKELVKDLKRLAARLEALDEHPDQN 180
           ALC+  VLLHFR SEQ AI+VMR LL  ++++   DK+LVK+LKR+   L A+D+ PD  
Sbjct: 18  ALCRVLVLLHFRPSEQGAIRVMRRLLCYLVDTASWDKDLVKELKRMGEHLTAIDKQPDLE 77

Query: 181 LSPDQADLVLGRLELEEDLGMDVLTAELQTPVPCSTRPSRSRKRVIRQEASSDE 342
           ++ DQADL+L +L+LE     D  T   QTPVPCST+P+RSR+RV  + +SSDE
Sbjct: 78  VTQDQADLILDQLKLE--FNFDAETPP-QTPVPCSTKPTRSRRRVKPESSSSDE 128


>ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1096

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/115 (52%), Positives = 80/115 (69%)
 Frame = +1

Query: 1    ALCKTAVLLHFRSSEQPAIKVMRGLLNRVIESVLQDKELVKDLKRLAARLEALDEHPDQN 180
            ALC+  VLL FR SEQ  +K M+ LL RVIE    +K+LVK+LKR++ RL  +D  PDQ 
Sbjct: 923  ALCRILVLLQFRISEQGPVKFMKRLLCRVIECASSEKDLVKELKRMSERLMTVDSQPDQE 982

Query: 181  LSPDQADLVLGRLELEEDLGMDVLTAELQTPVPCSTRPSRSRKRVIRQEASSDED 345
            L  D+ +L+LG+LEL+ DL +D   +  QTP   +TRP+RSR+RV  +E SSDED
Sbjct: 983  LMQDEVNLILGKLELDCDLDLDGSVSMPQTPAAPATRPTRSRRRVRIEEESSDED 1037


>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/114 (53%), Positives = 81/114 (71%)
 Frame = +1

Query: 1    ALCKTAVLLHFRSSEQPAIKVMRGLLNRVIESVLQDKELVKDLKRLAARLEALDEHPDQN 180
            ALC+  VLLHFR SEQ AI+VMR LL  ++++   DK+LVK+LKR+   L A+D+ PD  
Sbjct: 1562 ALCRVLVLLHFRPSEQGAIRVMRRLLCYLVDTASWDKDLVKELKRMGEHLTAIDKQPDLE 1621

Query: 181  LSPDQADLVLGRLELEEDLGMDVLTAELQTPVPCSTRPSRSRKRVIRQEASSDE 342
            ++ DQADL+L +L+LE     D  T   QTPVPCST+P+RSR+RV    +SSDE
Sbjct: 1622 VTQDQADLILDQLKLE--FNFDAETPP-QTPVPCSTKPTRSRRRVKPDSSSSDE 1672


>ref|XP_002534298.1| conserved hypothetical protein [Ricinus communis]
           gi|223525547|gb|EEF28084.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score =  112 bits (280), Expect = 3e-23
 Identities = 63/120 (52%), Positives = 86/120 (71%), Gaps = 4/120 (3%)
 Frame = +1

Query: 1   ALCKTAVLLHFRSSEQPAIKVMRGLLNRVIESVLQDKELVKDLKRLAARLEALDEHPDQN 180
           AL +  VLLHFRSSEQ A+K+MR LLNRV ESV+ DK+L+K+LKR+A  L++LD  PD+ 
Sbjct: 248 ALSRIVVLLHFRSSEQGAVKLMRRLLNRVAESVIADKDLMKELKRMAEHLKSLDRQPDEE 307

Query: 181 LSPDQADLVLGRLELEEDLGMDVLTAELQTPVPCSTRPS---RSRKRVIRQ-EASSDEDE 348
           L  DQ +L+LGRLEL  DL +D+ ++      P  +R S   R+R+RV R+ E SSD++E
Sbjct: 308 LLQDQINLILGRLEL--DLKLDIASSAAMPQTPALSRSSKLTRARRRVSREGETSSDDEE 365


Top