BLASTX nr result

ID: Coptis21_contig00002948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002948
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05159.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   9e-28
ref|XP_002467566.1| hypothetical protein SORBIDRAFT_01g030270 [S...   122   4e-26
gb|AAG13594.1|AC051633_10 mucin-like protein [Oryza sativa Japon...   114   8e-24
gb|EAY79392.1| hypothetical protein OsI_34518 [Oryza sativa Indi...   114   8e-24
ref|NP_001065198.1| Os10g0543500 [Oryza sativa Japonica Group] g...   114   8e-24

>dbj|BAK05159.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 368

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/110 (52%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   FVDSLPGYPDNIRYDGEGKFWIGLTSGRATAGDFILKNPTMRKIVVILSRYFD-VPITQK 178
           F++SLPG PDNIRYDGEG++WI L+SGR    D ++ +P +RK+V ++ +Y   VP   +
Sbjct: 252 FINSLPGMPDNIRYDGEGRYWIALSSGRTLQSDVLMWSPLVRKLVYMVEKYVTAVPQGLR 311

Query: 179 DGGVIAVNLNGEVIGLYTDPGLAGVTGGIKIGEHLYYASLAASYIGRVNV 328
           D G ++V LNGE + +YTDPGLA  TG +K+G++LYY SLA+SYI RV++
Sbjct: 312 DSGTMSVALNGEPVTMYTDPGLALATGALKVGDYLYYGSLASSYISRVDL 361


>ref|XP_002467566.1| hypothetical protein SORBIDRAFT_01g030270 [Sorghum bicolor]
           gi|241921420|gb|EER94564.1| hypothetical protein
           SORBIDRAFT_01g030270 [Sorghum bicolor]
          Length = 366

 Score =  122 bits (305), Expect = 4e-26
 Identities = 51/109 (46%), Positives = 80/109 (73%)
 Frame = +2

Query: 2   FVDSLPGYPDNIRYDGEGKFWIGLTSGRATAGDFILKNPTMRKIVVILSRYFDVPITQKD 181
           F+D+LPG+PDNIRYDGEG++WI L++GR    D ++K P +RK+V +  ++  VP   K+
Sbjct: 252 FIDNLPGFPDNIRYDGEGRYWIALSAGRTLQWDLLMKYPFIRKLVYLAEKFVAVPHALKN 311

Query: 182 GGVIAVNLNGEVIGLYTDPGLAGVTGGIKIGEHLYYASLAASYIGRVNV 328
            G ++V L+G+ + +Y+D GLA  TG +K+GEHLYY SL  SY+ ++++
Sbjct: 312 SGAMSVALDGKPVTMYSDQGLALATGWLKVGEHLYYGSLTESYLSKIDL 360


>gb|AAG13594.1|AC051633_10 mucin-like protein [Oryza sativa Japonica Group]
           gi|31433339|gb|AAP54868.1| Strictosidine synthase family
           protein, expressed [Oryza sativa Japonica Group]
           gi|125575575|gb|EAZ16859.1| hypothetical protein
           OsJ_32333 [Oryza sativa Japonica Group]
          Length = 369

 Score =  114 bits (285), Expect = 8e-24
 Identities = 49/110 (44%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   FVDSLPGYPDNIRYDGEGKFWIGLTSGRATAGDFILKNPTMRKIVVILSRY-FDVPITQK 178
           F+  LPG+PDNIRYDGEG++WI +++GR    D + ++P +RK+V ++ R+   VP   K
Sbjct: 250 FIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLVYMVDRFVVAVPHNLK 309

Query: 179 DGGVIAVNLNGEVIGLYTDPGLAGVTGGIKIGEHLYYASLAASYIGRVNV 328
           + G ++V L GE + +Y+DPGLA  TG +K+G++LYY SL   Y+ R+++
Sbjct: 310 NAGAMSVTLAGEPVSMYSDPGLALTTGWLKVGDYLYYGSLTKPYLSRIDL 359


>gb|EAY79392.1| hypothetical protein OsI_34518 [Oryza sativa Indica Group]
          Length = 281

 Score =  114 bits (285), Expect = 8e-24
 Identities = 49/110 (44%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   FVDSLPGYPDNIRYDGEGKFWIGLTSGRATAGDFILKNPTMRKIVVILSRY-FDVPITQK 178
           F+  LPG+PDNIRYDGEG++WI +++GR    D + ++P +RK+V ++ R+   VP   K
Sbjct: 162 FIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLVYMVDRFVVAVPHNLK 221

Query: 179 DGGVIAVNLNGEVIGLYTDPGLAGVTGGIKIGEHLYYASLAASYIGRVNV 328
           + G ++V L GE + +Y+DPGLA  TG +K+G++LYY SL   Y+ R+++
Sbjct: 222 NAGAMSVTLAGEPVSMYSDPGLALTTGWLKVGDYLYYGSLTKPYLSRIDL 271


>ref|NP_001065198.1| Os10g0543500 [Oryza sativa Japonica Group]
           gi|113639807|dbj|BAF27112.1| Os10g0543500, partial
           [Oryza sativa Japonica Group]
          Length = 255

 Score =  114 bits (285), Expect = 8e-24
 Identities = 49/110 (44%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   FVDSLPGYPDNIRYDGEGKFWIGLTSGRATAGDFILKNPTMRKIVVILSRY-FDVPITQK 178
           F+  LPG+PDNIRYDGEG++WI +++GR    D + ++P +RK+V ++ R+   VP   K
Sbjct: 136 FIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLVYMVDRFVVAVPHNLK 195

Query: 179 DGGVIAVNLNGEVIGLYTDPGLAGVTGGIKIGEHLYYASLAASYIGRVNV 328
           + G ++V L GE + +Y+DPGLA  TG +K+G++LYY SL   Y+ R+++
Sbjct: 196 NAGAMSVTLAGEPVSMYSDPGLALTTGWLKVGDYLYYGSLTKPYLSRIDL 245


Top