BLASTX nr result

ID: Coptis21_contig00002937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002937
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305481.1| predicted protein [Populus trichocarpa] gi|1...   403   e-110
gb|AGE46019.1| 5'-methylthioadenosine/s-adenosylhomocysteine nuc...   400   e-109
ref|XP_003631578.1| PREDICTED: 5'-methylthioadenosine/S-adenosyl...   397   e-108
ref|XP_002313743.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|XP_002273006.2| PREDICTED: 5'-methylthioadenosine/S-adenosyl...   391   e-106

>ref|XP_002305481.1| predicted protein [Populus trichocarpa] gi|118481001|gb|ABK92454.1|
           unknown [Populus trichocarpa]
           gi|222848445|gb|EEE85992.1| predicted protein [Populus
           trichocarpa]
          Length = 263

 Score =  403 bits (1035), Expect = e-110
 Identities = 202/263 (76%), Positives = 227/263 (86%), Gaps = 1/263 (0%)
 Frame = +3

Query: 75  MAPDGETSSEHEVIEAD-KXXXXXXXXXXAMQTEALPLVTKFQLSEDIDSVFPKGVPWVR 251
           MAP GE S E  V++ + +          AMQTEA+P+V KFQL ED+D VFPKGVPWVR
Sbjct: 1   MAPHGEGSEEAMVVQDENRKPISSILIVIAMQTEAMPVVNKFQLKEDLDPVFPKGVPWVR 60

Query: 252 YHGIYKDLNINIIWPGKDAVLGVDSVGTVSASLVTYASIQALQPDLIINAGTSGGFKAKG 431
           YHGIYKDL+IN++WPGKD  LGVDSVGT+SASLVTYA+IQALQPDLIINAGT+GGFK KG
Sbjct: 61  YHGIYKDLHINLVWPGKDLTLGVDSVGTISASLVTYAAIQALQPDLIINAGTAGGFKVKG 120

Query: 432 ACIGDVFLVSGVAFHDRRIPIPVFDQYGICGKETLSTPNLLKEVNLKVGKLSTGDSLDMS 611
           ACI DVFLVS VAFHDRRIPIPVFD YG+  ++  STPNLLKE+NLK GKLSTGDSLDMS
Sbjct: 121 ACISDVFLVSDVAFHDRRIPIPVFDLYGVGLRQCFSTPNLLKELNLKAGKLSTGDSLDMS 180

Query: 612 PQDEAAILANDATVKDMEGAAVAYVAGLLSVPAIFIKAITDIIDGDKPTAEEFLQNLVAV 791
           PQDEA+I+ANDATVKDMEGAAVAYVA LL VPAIFIKA+TDI+DGDKPTAEEFLQNL AV
Sbjct: 181 PQDEASIVANDATVKDMEGAAVAYVADLLKVPAIFIKAVTDIVDGDKPTAEEFLQNLAAV 240

Query: 792 TAALDQSVTEVVDFVSGKYISEL 860
           TAALDQ+V +VVDF+SGK +SEL
Sbjct: 241 TAALDQAVAQVVDFISGKCLSEL 263


>gb|AGE46019.1| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase 1-like
           protein [Elaeis guineensis]
          Length = 283

 Score =  400 bits (1027), Expect = e-109
 Identities = 196/235 (83%), Positives = 223/235 (94%), Gaps = 1/235 (0%)
 Frame = +3

Query: 159 AMQTEALPLVTKFQLSEDID-SVFPKGVPWVRYHGIYKDLNINIIWPGKDAVLGVDSVGT 335
           AMQTEALPLV KFQLSED D S+FPKGVPWVRYHG YK+L+IN++WPGKD+VLGVDSVGT
Sbjct: 49  AMQTEALPLVNKFQLSEDTDGSLFPKGVPWVRYHGKYKELDINLVWPGKDSVLGVDSVGT 108

Query: 336 VSASLVTYASIQALQPDLIINAGTSGGFKAKGACIGDVFLVSGVAFHDRRIPIPVFDQYG 515
           VSASLVTYAS+QAL+PDLIINAGT+GGFKAKGAC+GDV+L S VAFHDRRIPIPVFD YG
Sbjct: 109 VSASLVTYASVQALKPDLIINAGTAGGFKAKGACVGDVYLASDVAFHDRRIPIPVFDLYG 168

Query: 516 ICGKETLSTPNLLKEVNLKVGKLSTGDSLDMSPQDEAAILANDATVKDMEGAAVAYVAGL 695
           I  + TLSTPNL+KE+NLKVGKLSTGDSLDMSPQDEAAILANDAT+KDMEGAAV+YVAGL
Sbjct: 169 IGARRTLSTPNLVKELNLKVGKLSTGDSLDMSPQDEAAILANDATIKDMEGAAVSYVAGL 228

Query: 696 LSVPAIFIKAITDIIDGDKPTAEEFLQNLVAVTAALDQSVTEVVDFVSGKYISEL 860
           LSVPAIF+KA+TDI+DG+KPT EEFLQNL+AVTAALDQ+V++V+DF+SGK +SEL
Sbjct: 229 LSVPAIFVKAVTDIVDGEKPTPEEFLQNLIAVTAALDQAVSQVIDFLSGKCLSEL 283


>ref|XP_003631578.1| PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine
           nucleosidase 1 isoform 2 [Vitis vinifera]
           gi|297744678|emb|CBI37940.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score =  397 bits (1019), Expect = e-108
 Identities = 202/265 (76%), Positives = 227/265 (85%), Gaps = 3/265 (1%)
 Frame = +3

Query: 75  MAPDGETSSEHE---VIEADKXXXXXXXXXXAMQTEALPLVTKFQLSEDIDSVFPKGVPW 245
           MAP  + S   E   V EA+K          AMQTEALPLV +FQL+ED+DSVFP+GVPW
Sbjct: 1   MAPHDDRSDVAEEAMVAEAEKRPIATIVIIIAMQTEALPLVNRFQLTEDLDSVFPRGVPW 60

Query: 246 VRYHGIYKDLNINIIWPGKDAVLGVDSVGTVSASLVTYASIQALQPDLIINAGTSGGFKA 425
           VRYHGIYKDL+I+IIWPGKD VLGVD+VGTVSASLVTYASIQALQPDL+INAGT+GGFKA
Sbjct: 61  VRYHGIYKDLHISIIWPGKDLVLGVDNVGTVSASLVTYASIQALQPDLVINAGTAGGFKA 120

Query: 426 KGACIGDVFLVSGVAFHDRRIPIPVFDQYGICGKETLSTPNLLKEVNLKVGKLSTGDSLD 605
           KGAC+GDV L + VAFHDRRIPIPVFDQYGI  ++  S PNLLKE+NLK+G LSTGDSLD
Sbjct: 121 KGACVGDVVLATDVAFHDRRIPIPVFDQYGIGLRKACSAPNLLKELNLKIGALSTGDSLD 180

Query: 606 MSPQDEAAILANDATVKDMEGAAVAYVAGLLSVPAIFIKAITDIIDGDKPTAEEFLQNLV 785
           MSP DE++ILAN ATVKDMEGAAVAYVA LL VP IFIKA+TDI+DG+KPTAEEFLQNL 
Sbjct: 181 MSPHDESSILANGATVKDMEGAAVAYVADLLKVPVIFIKAVTDIVDGEKPTAEEFLQNLA 240

Query: 786 AVTAALDQSVTEVVDFVSGKYISEL 860
           AVTAALDQSVT+VVDF++GK ISEL
Sbjct: 241 AVTAALDQSVTKVVDFINGKCISEL 265


>ref|XP_002313743.1| predicted protein [Populus trichocarpa] gi|222850151|gb|EEE87698.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  394 bits (1011), Expect = e-107
 Identities = 195/263 (74%), Positives = 226/263 (85%), Gaps = 1/263 (0%)
 Frame = +3

Query: 75  MAPDGETSSEHEVIEAD-KXXXXXXXXXXAMQTEALPLVTKFQLSEDIDSVFPKGVPWVR 251
           MAP GE S E  V++ + +          AMQTEA+P+V KFQL ED+DSVFPKGVPWVR
Sbjct: 1   MAPHGEGSEEAMVVQDENRKPISSILIIIAMQTEAMPIVNKFQLKEDLDSVFPKGVPWVR 60

Query: 252 YHGIYKDLNINIIWPGKDAVLGVDSVGTVSASLVTYASIQALQPDLIINAGTSGGFKAKG 431
           YHG+YKDL IN++WPGKD+ LGVDSVGT+SASLVTYA+IQALQPDLIINAGT+G FK KG
Sbjct: 61  YHGVYKDLQINLVWPGKDSTLGVDSVGTISASLVTYAAIQALQPDLIINAGTAGSFKVKG 120

Query: 432 ACIGDVFLVSGVAFHDRRIPIPVFDQYGICGKETLSTPNLLKEVNLKVGKLSTGDSLDMS 611
           A I DVFL S VAFHDRRIPIPVFD YG+  +++ STPNLLKE+NLK GKLSTGDSLDMS
Sbjct: 121 ASISDVFLASDVAFHDRRIPIPVFDLYGVGSRQSFSTPNLLKELNLKAGKLSTGDSLDMS 180

Query: 612 PQDEAAILANDATVKDMEGAAVAYVAGLLSVPAIFIKAITDIIDGDKPTAEEFLQNLVAV 791
           PQ+EA+I+ANDATVKDMEGAAVAYVA LL VPAIFIKA+TDI+DG+KP AEEFLQNL AV
Sbjct: 181 PQEEASIVANDATVKDMEGAAVAYVADLLKVPAIFIKAVTDIVDGEKPPAEEFLQNLAAV 240

Query: 792 TAALDQSVTEVVDFVSGKYISEL 860
           TAAL+Q+VT+VVDF++GK +SEL
Sbjct: 241 TAALEQAVTQVVDFINGKCLSEL 263


>ref|XP_002273006.2| PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine
           nucleosidase 1 isoform 1 [Vitis vinifera]
          Length = 269

 Score =  391 bits (1004), Expect = e-106
 Identities = 202/269 (75%), Positives = 227/269 (84%), Gaps = 7/269 (2%)
 Frame = +3

Query: 75  MAPDGETSSEHE---VIEADKXXXXXXXXXXAMQTEALPLVTKFQLSEDIDSVFPKGVPW 245
           MAP  + S   E   V EA+K          AMQTEALPLV +FQL+ED+DSVFP+GVPW
Sbjct: 1   MAPHDDRSDVAEEAMVAEAEKRPIATIVIIIAMQTEALPLVNRFQLTEDLDSVFPRGVPW 60

Query: 246 VRYHGIYKDLNINIIWPGKDAVLGVDSVGTVSASLVTYASIQALQPDLIINAGTSGGFKA 425
           VRYHGIYKDL+I+IIWPGKD VLGVD+VGTVSASLVTYASIQALQPDL+INAGT+GGFKA
Sbjct: 61  VRYHGIYKDLHISIIWPGKDLVLGVDNVGTVSASLVTYASIQALQPDLVINAGTAGGFKA 120

Query: 426 KGACIGDVFLVSGVAFHDRRIPIP----VFDQYGICGKETLSTPNLLKEVNLKVGKLSTG 593
           KGAC+GDV L + VAFHDRRIPIP    VFDQYGI  ++  S PNLLKE+NLK+G LSTG
Sbjct: 121 KGACVGDVVLATDVAFHDRRIPIPFLLQVFDQYGIGLRKACSAPNLLKELNLKIGALSTG 180

Query: 594 DSLDMSPQDEAAILANDATVKDMEGAAVAYVAGLLSVPAIFIKAITDIIDGDKPTAEEFL 773
           DSLDMSP DE++ILAN ATVKDMEGAAVAYVA LL VP IFIKA+TDI+DG+KPTAEEFL
Sbjct: 181 DSLDMSPHDESSILANGATVKDMEGAAVAYVADLLKVPVIFIKAVTDIVDGEKPTAEEFL 240

Query: 774 QNLVAVTAALDQSVTEVVDFVSGKYISEL 860
           QNL AVTAALDQSVT+VVDF++GK ISEL
Sbjct: 241 QNLAAVTAALDQSVTKVVDFINGKCISEL 269


Top