BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002934
         (2050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD39581.1|AC007067_21 T10O24.21 [Arabidopsis thaliana]             73   3e-10
ref|NP_172528.2| pre-mRNA-processing factor 17 [Arabidopsis thal...    73   3e-10
emb|CBI32147.3| unnamed protein product [Vitis vinifera]               73   3e-10
ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-lik...    73   3e-10
ref|XP_002892579.1| predicted protein [Arabidopsis lyrata subsp....    72   4e-10

>gb|AAD39581.1|AC007067_21 T10O24.21 [Arabidopsis thaliana]
          Length = 616

 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = +3

Query: 1926 NLSENKSIDPSQRVITYNPTYDQLWAPIYGPAHPYAKDGIA 2048
            N S++K IDP+Q V+ YNPT+DQLWAP++GPAHPYAKDGIA
Sbjct: 48   NQSKSKPIDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIA 88


>ref|NP_172528.2| pre-mRNA-processing factor 17 [Arabidopsis thaliana]
            gi|133778818|gb|ABO38749.1| At1g10580 [Arabidopsis
            thaliana] gi|332190476|gb|AEE28597.1| pre-mRNA-processing
            factor 17 [Arabidopsis thaliana]
          Length = 573

 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = +3

Query: 1926 NLSENKSIDPSQRVITYNPTYDQLWAPIYGPAHPYAKDGIA 2048
            N S++K IDP+Q V+ YNPT+DQLWAP++GPAHPYAKDGIA
Sbjct: 48   NQSKSKPIDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIA 88


>emb|CBI32147.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
 Frame = +3

Query: 1875 DSPPSIPSYPLQNFRPK----------NLSENKSIDPSQRVITYNPTYDQLWAPIYGPAH 2024
            DS P+  + P ++  PK            + +K IDP Q V+ +NPTYDQLWAPIYGPAH
Sbjct: 31   DSSPTRIALPSKSSAPKVDDTTLALAIANTNDKPIDPIQHVVPFNPTYDQLWAPIYGPAH 90

Query: 2025 PYAKDGIA 2048
            PYAKDGIA
Sbjct: 91   PYAKDGIA 98


>ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-like [Vitis vinifera]
          Length = 583

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
 Frame = +3

Query: 1875 DSPPSIPSYPLQNFRPK----------NLSENKSIDPSQRVITYNPTYDQLWAPIYGPAH 2024
            DS P+  + P ++  PK            + +K IDP Q V+ +NPTYDQLWAPIYGPAH
Sbjct: 31   DSSPTRIALPSKSSAPKVDDTTLALAIANTNDKPIDPIQHVVPFNPTYDQLWAPIYGPAH 90

Query: 2025 PYAKDGIA 2048
            PYAKDGIA
Sbjct: 91   PYAKDGIA 98


>ref|XP_002892579.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338421|gb|EFH68838.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score = 72.4 bits (176), Expect = 4e-10
 Identities = 29/41 (70%), Positives = 37/41 (90%)
 Frame = +3

Query: 1926 NLSENKSIDPSQRVITYNPTYDQLWAPIYGPAHPYAKDGIA 2048
            N S++K IDP+Q V+ +NPT++Q+WAPIYGPAHPYAKDGIA
Sbjct: 47   NRSKSKPIDPTQHVVLFNPTHEQMWAPIYGPAHPYAKDGIA 87