BLASTX nr result

ID: Coptis21_contig00002926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002926
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285235.1| PREDICTED: uncharacterized protein LOC100260...    70   3e-11
ref|XP_002510114.1| conserved hypothetical protein [Ricinus comm...    63   5e-09
ref|NP_001236830.1| uncharacterized protein LOC100305542 [Glycin...    58   1e-08
ref|NP_001242042.1| uncharacterized protein LOC100797484 [Glycin...    52   7e-08
ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|2...    49   2e-07

>ref|XP_002285235.1| PREDICTED: uncharacterized protein LOC100260909 [Vitis vinifera]
           gi|302142215|emb|CBI19418.3| unnamed protein product
           [Vitis vinifera]
          Length = 91

 Score = 70.1 bits (170), Expect(2) = 3e-11
 Identities = 35/63 (55%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
 Frame = -3

Query: 489 GLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRSQRRIKAPKRHMTN----SWASRVPHL 322
           GLLKL NDVR CEY DVHVMWEML  TE ++ RS  R     +  T      WA R P+L
Sbjct: 28  GLLKLRNDVRTCEYRDVHVMWEMLNGTETELGRSPERSTGNSKKRTYWKIIEWAKRAPYL 87

Query: 321 CRS 313
           CRS
Sbjct: 88  CRS 90



 Score = 24.3 bits (51), Expect(2) = 3e-11
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 650 ETMVFLIRRVWSSFMTRLRIRKNG 579
           + M+F +R VW+    R  IRK G
Sbjct: 5   DKMMFPMRTVWNGVAKRFGIRKTG 28


>ref|XP_002510114.1| conserved hypothetical protein [Ricinus communis]
           gi|223550815|gb|EEF52301.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 62.8 bits (151), Expect(2) = 5e-09
 Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = -3

Query: 489 GLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRSQRRIKAPKRHMTN--SWASRVPHLCR 316
           GLLKL +DVR CEYEDV +MWEMLR+TE +  R  + +K+ KR      SWA   P+  R
Sbjct: 28  GLLKLRHDVRACEYEDVRIMWEMLRRTETESARQSQPVKSKKRCFWKCFSWARCSPYFGR 87

Query: 315 S 313
           +
Sbjct: 88  N 88



 Score = 23.9 bits (50), Expect(2) = 5e-09
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 632 IRRVWSSFMTRLRIRKNG 579
           +RRVW     R+ IRK G
Sbjct: 11  VRRVWKGVALRIGIRKRG 28


>ref|NP_001236830.1| uncharacterized protein LOC100305542 [Glycine max]
           gi|255625859|gb|ACU13274.1| unknown [Glycine max]
          Length = 100

 Score = 58.2 bits (139), Expect(2) = 1e-08
 Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = -3

Query: 489 GLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRSQ--RRIKAPKRHMTN--SWASRVPHL 322
           GLLKLSNDVR CEYED+ VMWE+L + E +  RS   R+    K H      WA   P +
Sbjct: 38  GLLKLSNDVRACEYEDIQVMWEILNRNESEFGRSSSTRKGNNKKGHCWKLLRWARCAPCM 97

Query: 321 CRS 313
           CR+
Sbjct: 98  CRT 100



 Score = 27.3 bits (59), Expect(2) = 1e-08
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 650 ETMVFLIRRVWSSFMTRLRIRKNG 579
           + M+F +RRVW     RL IRK G
Sbjct: 15  QNMMFPVRRVWFVVAKRLGIRKTG 38


>ref|NP_001242042.1| uncharacterized protein LOC100797484 [Glycine max]
           gi|255640574|gb|ACU20572.1| unknown [Glycine max]
          Length = 104

 Score = 52.0 bits (123), Expect(2) = 7e-08
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
 Frame = -3

Query: 489 GLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRSQRRIKAPKRHMTNS--------WASR 334
           GLLKL +DVR CEYED+ VMWE+L + E     S    K    +            WA  
Sbjct: 38  GLLKLRHDVRACEYEDIRVMWEILNRNESKFGHSSSSRKGNNNNNNKKGHCWKLLRWARC 97

Query: 333 VPHLCRS 313
            P++CR+
Sbjct: 98  APYMCRA 104



 Score = 30.8 bits (68), Expect(2) = 7e-08
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 650 ETMVFLIRRVWSSFMTRLRIRKNG 579
           + M++ +RRVW    TRL IRKNG
Sbjct: 15  QNMMYPVRRVWFVVATRLGIRKNG 38


>ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|222841401|gb|EEE78948.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 49.3 bits (116), Expect(2) = 2e-07
 Identities = 24/49 (48%), Positives = 31/49 (63%)
 Frame = -3

Query: 489 GLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRSQRRIKAPKRHMTNSW 343
           GLL+L NDV+ C YEDV VMWE+LR++E ++  S      PKR     W
Sbjct: 28  GLLELHNDVQTCGYEDVQVMWEILRRSESELMAS-----LPKRKQRPFW 71



 Score = 32.0 bits (71), Expect(2) = 2e-07
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -1

Query: 644 MVFLIRRVWSSFMTRLRIRKNG 579
           M+F +RRVW +   RLR RKNG
Sbjct: 5   MIFPVRRVWLAVSARLRARKNG 26


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