BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002918
         (3649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis ...   538   e-150
ref|XP_002529478.1| protein with unknown function [Ricinus commu...   529   e-147
ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis ...   524   e-146
gb|ACB87912.1| F-box-containing protein 2 [Malus x domestica]         509   e-141
ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula] g...   509   e-141

>ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
          Length = 444

 Score =  538 bits (1386), Expect = e-150
 Identities = 271/441 (61%), Positives = 328/441 (74%), Gaps = 16/441 (3%)
 Frame = +2

Query: 1904 LEGLGDLSLDLIASKLGPKECAALCCVNKRLRDTATDDSLWRTFCRQDLHLQDPLDPSAN 2083
            LE LGDL+++ I SKL  K+  A+ CV+K+LR +A+++SLW   C QDL L  P+DP   
Sbjct: 5    LEDLGDLAINAIISKLDTKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDPLGK 64

Query: 2084 PTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLKD 2263
            P  SFK  Y+ WR++F  YPWPLVKRVK CWD LKNW + +FPEA  TL+KGA+E +++ 
Sbjct: 65   PAPSFKETYRLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPEADATLRKGATEVEIEA 124

Query: 2264 VEDKLGVNLPLSTKLLYRFCNGQELP--IQDPRFGSPLGLIGGYLFYDHLVNVYLLPLTQ 2437
            +E+ L V LPL T+LLYRFC+GQEL   +     GS LG+IGGY FYDHLVNV LLPL Q
Sbjct: 125  LENILKVKLPLPTRLLYRFCDGQELTDDVGGTALGSSLGIIGGYCFYDHLVNVCLLPLRQ 184

Query: 2438 VITQTK----QFGFSDTSSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLFTDGEMMPC 2605
            VI +TK    Q GFS T+SKY++VA+SSTY+ K FFLNC TGQL VGT  L + GEM+PC
Sbjct: 185  VILETKEITDQLGFS-TTSKYVIVAASSTYIGKFFFLNCTTGQLYVGTRSLVSAGEMIPC 243

Query: 2606 VLVPAISQRH---------AMLLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPSCST 2758
            V    IS  H         AMLLWLEEH RRL++GII+LR EG +RSINLFPE +P CST
Sbjct: 244  VPNALISPMHDSNTGQQQDAMLLWLEEHVRRLQNGIIKLRNEGMIRSINLFPEESPLCST 303

Query: 2759 AVTSGVQIRASAVFVPE-LSYLQKGPEYWFSYSIRMSLLSEGCIANGTTFPSCQLYWRHW 2935
            AVT+GVQ+RASAVF+PE  + L +  +Y F+YSIRM LL EGCI NGT+F SCQL WRHW
Sbjct: 304  AVTNGVQVRASAVFIPEGCNLLDESHKYLFAYSIRMRLLPEGCIVNGTSFGSCQLNWRHW 363

Query: 2936 IIRGKDSVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRLTNP 3115
            IIR  D VVSEV+ EAVIG+YPLLYP  +EFVYESCTPL S  GS+EG FTFVPGRL +P
Sbjct: 364  IIRANDHVVSEVNAEAVIGKYPLLYPGGEEFVYESCTPLSSSQGSIEGAFTFVPGRLADP 423

Query: 3116 KGGPFMVEVAQFPLQLPDYVY 3178
            KG  F VEV +FPLQ PDY++
Sbjct: 424  KGSAFEVEVGRFPLQCPDYIF 444


>ref|XP_002529478.1| protein with unknown function [Ricinus communis]
            gi|223531036|gb|EEF32888.1| protein with unknown function
            [Ricinus communis]
          Length = 446

 Score =  529 bits (1362), Expect = e-147
 Identities = 269/444 (60%), Positives = 326/444 (73%), Gaps = 19/444 (4%)
 Frame = +2

Query: 1904 LEGLGDLSLDLIASKLGPKECAALCCVNKRLRDTATDDSLWRTFCRQDLHLQDPLDPSAN 2083
            LE +GDL+L+ I S LGP+E A + CV+KRL+ +A+++SLW  FC QDLHL  PLDP  N
Sbjct: 3    LEAVGDLALNEILSILGPEETAIVACVSKRLKASASEESLWSKFCFQDLHLSSPLDPHGN 62

Query: 2084 PTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLKD 2263
            P  SFK AY +WR+ F+ YPWPLVKRVK CWD LKNW   +FPEA  TLQ+GA+E +++ 
Sbjct: 63   PLPSFKFAYGSWREAFAMYPWPLVKRVKRCWDRLKNWLTTNFPEAAATLQQGATEDEIRR 122

Query: 2264 VEDKLGVNLPLSTKLLYRFCNGQELPIQD---PRFGSPLGLIGGYLFYDHLVNVYLLPLT 2434
             E  L V LPL T++LYRF NGQ    +D      G+ LGLIGGY FY HLVNVYLLPL 
Sbjct: 123  FEKVLEVKLPLPTRVLYRFYNGQVFQEKDALTSAHGNNLGLIGGYAFYHHLVNVYLLPLD 182

Query: 2435 QVITQTKQ----FGFSD--TSSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLFTDGEM 2596
            QVI +TKQ     G S    S+KYIVVA+SS +++K FFLNC  GQL VGT  L  DGEM
Sbjct: 183  QVILETKQIVCHLGISGGFNSTKYIVVAASSAFIEKFFFLNCTNGQLYVGTRNLPIDGEM 242

Query: 2597 MPCV---LVPAI------SQRHAMLLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPS 2749
            MPCV   L+ ++       QR  MLLWLEEHGRRL+ GII+LREE  +R+I  FPE  PS
Sbjct: 243  MPCVPNALLRSVHDPSSDQQRDGMLLWLEEHGRRLQDGIIKLREERNIRTICQFPEEPPS 302

Query: 2750 CSTAVTSGVQIRASAVFVPELSYLQKGPE-YWFSYSIRMSLLSEGCIANGTTFPSCQLYW 2926
            CSTA+T+GV++RASA+FVPE + L  G + YWF+YSIRMSLL +GCI NG  F SCQL  
Sbjct: 303  CSTAITNGVKVRASAIFVPEAADLDGGSDKYWFAYSIRMSLLPDGCIVNGMYFASCQLQK 362

Query: 2927 RHWIIRGKDSVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRL 3106
            RHWIIR  ++VVS+V GE VIG+YP+L P  +EFVYESC PLP+ PGSVEG FTFVP RL
Sbjct: 363  RHWIIRANETVVSDVVGEGVIGKYPVLCPGEQEFVYESCMPLPTSPGSVEGSFTFVPDRL 422

Query: 3107 TNPKGGPFMVEVAQFPLQLPDYVY 3178
            T+PKG PF VEVA+F LQLPDY++
Sbjct: 423  THPKGAPFEVEVARFHLQLPDYIF 446


>ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
          Length = 443

 Score =  524 bits (1349), Expect = e-146
 Identities = 266/443 (60%), Positives = 325/443 (73%), Gaps = 17/443 (3%)
 Frame = +2

Query: 1901 KLEGLGDLSLDLIASKLGPKECAALCCVNKRLRDTATDDSLWRTFCRQDLHLQDPLDPSA 2080
            +LE LGDL+++ I SKL  K+  A+ CV+K+LR +A+++SLW   C QDL L  P+DP  
Sbjct: 2    RLEDLGDLAINAIISKLDAKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDPLG 61

Query: 2081 NPTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLK 2260
             P  SFK  YQ WR++F  YPWPLVKRVK CWD LKNW + +FP+A  TL+KGA+E +++
Sbjct: 62   KPAPSFKETYQLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPDADATLRKGATEVEIE 121

Query: 2261 DVEDKLGVNLPLSTKLLYRFCNGQELPIQD---PRFGSPLGLIGGYLFYDHLVNVYLLPL 2431
             +E+ L V LPL T+LLYRFC+GQEL  +D      G  LG++GGY   DHLVNV LLPL
Sbjct: 122  ALENILKVKLPLPTRLLYRFCDGQELTEEDVGGTALGGSLGIMGGYCCNDHLVNVCLLPL 181

Query: 2432 TQVITQTK----QFGFSDTSSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLFTDGEMM 2599
             QVI +TK    Q GFS T+SKY++VA+SSTY+ K FFLNC TGQL VGT  L + GEM+
Sbjct: 182  RQVILETKEITDQLGFS-TTSKYVIVAASSTYIGKFFFLNCTTGQLYVGTRSLVSAGEMI 240

Query: 2600 PCVLVPAISQRH---------AMLLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPSC 2752
            PCV    IS  H         AMLLWLEEH RRL++GII+LR+EG +RSINLFPE  P C
Sbjct: 241  PCVPNALISPMHDMNTGQQQDAMLLWLEEHVRRLQNGIIKLRKEGMIRSINLFPEEPPLC 300

Query: 2753 STAVTSGVQIRASAVFVPELSYLQ-KGPEYWFSYSIRMSLLSEGCIANGTTFPSCQLYWR 2929
            STAVT+G+Q+RASAVF+PE   L+ K  +Y F+YSIRM LL EGCI NG +F SCQL WR
Sbjct: 301  STAVTNGIQVRASAVFIPEGCNLRDKSHKYVFAYSIRMRLLPEGCIVNGISFGSCQLNWR 360

Query: 2930 HWIIRGKDSVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRLT 3109
            HWIIR  D VVSEV+ EAVIG+YPLLYP  +EFVYESCT L S  GS+EG FTFVPGRL 
Sbjct: 361  HWIIRANDHVVSEVNAEAVIGKYPLLYPGGEEFVYESCTHLSSSRGSIEGAFTFVPGRLA 420

Query: 3110 NPKGGPFMVEVAQFPLQLPDYVY 3178
            +PKG  F VEV +FPLQ PDY++
Sbjct: 421  DPKGSAFEVEVGRFPLQCPDYIF 443


>gb|ACB87912.1| F-box-containing protein 2 [Malus x domestica]
          Length = 443

 Score =  509 bits (1312), Expect = e-141
 Identities = 262/442 (59%), Positives = 318/442 (71%), Gaps = 17/442 (3%)
 Frame = +2

Query: 1904 LEGLGDLSLDLIASKLGPKECAALCCVNKRLRDTATDDSLWRTFCRQDLHLQDPLDPSAN 2083
            LE +GDL+L +I SKLG ++ A   CV+ +LR +A+D+SLW  FC +DLHL  PLDP  N
Sbjct: 3    LEAVGDLALHIILSKLGAEDSAKAACVSTKLRASASDESLWSLFCARDLHLSQPLDPLGN 62

Query: 2084 PTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLKD 2263
               SFK +YQ WR TF  YPW LVKRVK CWD ++NW  I+FPEA  TL+KGASEAD+++
Sbjct: 63   LAPSFKESYQLWRVTFKMYPWSLVKRVKRCWDKIRNWLTINFPEAVSTLKKGASEADIQE 122

Query: 2264 VEDKLGVNLPLSTKLLYRFCNGQ---ELPIQDPRFGSPLGLIGGYLFYDHLVNVYLLPLT 2434
            VE  L V LPL T++LYRF NGQ   E   Q+   G PLGLIGGY FYD LV VYL+PL 
Sbjct: 123  VEKILKVKLPLPTRILYRFHNGQAFEEKHFQNNLVGCPLGLIGGYAFYDQLVTVYLMPLR 182

Query: 2435 QVITQT----KQFGFSDTSSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLFTDGEMMP 2602
            QV+ +T    ++ GF+   S+Y+VVA S  Y  KLFFLNC +GQL VGT  L TDG+M+P
Sbjct: 183  QVVLETMKIRRKLGFTG-RSEYVVVADSCAYSGKLFFLNCTSGQLYVGTRNLPTDGQMLP 241

Query: 2603 CVLVPAIS---------QRHAMLLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPSCS 2755
            CV    IS         Q+  MLLWLEEHGRRLE+GII+LR+E   R+I+ FPE +P CS
Sbjct: 242  CVPDALISSIHDCNVDRQQDGMLLWLEEHGRRLENGIIKLRQEENFRTISQFPEESPLCS 301

Query: 2756 TAVTSGVQIRASAVFVPELSYLQKGPE-YWFSYSIRMSLLSEGCIANGTTFPSCQLYWRH 2932
            TA+T+GV++RASAVFVPE + L+   E Y FSYSIRMS L EGC+ NG  F SCQL  RH
Sbjct: 302  TAITNGVKVRASAVFVPECADLENTSEKYTFSYSIRMSFLPEGCVINGMPFSSCQLNRRH 361

Query: 2933 WIIRGKDSVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRLTN 3112
            WIIR  D VV++V GEAVIGQYPLL P  +EFVYES + LPS  GS+EG FTFVPG L  
Sbjct: 362  WIIRSNDVVVADVGGEAVIGQYPLLRPGEEEFVYESYSCLPSSSGSIEGSFTFVPGSLRV 421

Query: 3113 PKGGPFMVEVAQFPLQLPDYVY 3178
            PKGGPF V VA+FPLQLP+Y++
Sbjct: 422  PKGGPFEVAVARFPLQLPNYIF 443


>ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula]
            gi|355507878|gb|AES89020.1| F-box protein SKIP16
            [Medicago truncatula]
          Length = 443

 Score =  509 bits (1310), Expect = e-141
 Identities = 256/442 (57%), Positives = 316/442 (71%), Gaps = 17/442 (3%)
 Frame = +2

Query: 1904 LEGLGDLSLDLIASKLGPKECAALCCVNKRLRDTATDDSLWRTFCRQDLHLQDPLDPSAN 2083
            LE +GDL++  I   L P++ A + CV+ R +   +DDSLW   C ++L L  P+D   N
Sbjct: 3    LESVGDLAIHEIMENLKPEDIARISCVSNRFKSFTSDDSLWSKICFRELSLTQPIDHLGN 62

Query: 2084 PTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLKD 2263
            PT SFK AYQTWR+ F  YPW LVKRVK CWD +K W   +FPEA  TL +GASE ++++
Sbjct: 63   PTPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLTNNFPEAKETLCEGASEVEIQE 122

Query: 2264 VEDKLGVNLPLSTKLLYRFCNGQELPIQDPRFGSP---LGLIGGYLFYDHLVNVYLLPLT 2434
            +ED L V LPL T++LYRF NGQE+   D    +    LG+IGGY FYDH VNVYLLP++
Sbjct: 123  LEDVLNVKLPLPTRILYRFHNGQEIEKHDHDTSTSDISLGIIGGYSFYDHFVNVYLLPIS 182

Query: 2435 QVITQTKQF----GFSDTSSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLFTDGEMMP 2602
            QVI +T+Q     GF    SKY++VA+SSTY +KLFFLNC  GQL VGT  L T+ ++MP
Sbjct: 183  QVIQETQQISHNLGFL-RRSKYVLVAASSTYREKLFFLNCTNGQLYVGTRNLLTNRDLMP 241

Query: 2603 CVLVPAISQRH---------AMLLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPSCS 2755
            CV    IS  H         AMLLWLEEHGRRL+ G I+L EEG  +SI+LFPE +P CS
Sbjct: 242  CVPQNLISLHHEMDSEKIQDAMLLWLEEHGRRLQRGFIKLLEEGNAKSISLFPEESPVCS 301

Query: 2756 TAVTSGVQIRASAVFVPELSYLQKGPE-YWFSYSIRMSLLSEGCIANGTTFPSCQLYWRH 2932
            TAVT+GVQIRASA+ VPE   LQ   E Y FSYSIRMSL  +GC+ NG +  SCQLYWRH
Sbjct: 302  TAVTNGVQIRASALLVPEGVDLQGDREKYLFSYSIRMSLQPQGCVINGMSHSSCQLYWRH 361

Query: 2933 WIIRGKDSVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRLTN 3112
            WIIR  D+VVS+V+GEAVIG YPLL P  KEFVY+SC+PLP+  GS+EG FTFVPGRL +
Sbjct: 362  WIIRANDAVVSDVNGEAVIGMYPLLRPGDKEFVYQSCSPLPTSSGSIEGSFTFVPGRLVD 421

Query: 3113 PKGGPFMVEVAQFPLQLPDYVY 3178
            P+G PF+V+VA FPLQLPDY++
Sbjct: 422  PRGDPFLVQVAHFPLQLPDYIF 443