BLASTX nr result

ID: Coptis21_contig00002897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002897
         (2291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]   259   2e-66
ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|2...   201   9e-49
emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]   200   1e-48
ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-47
ref|XP_002534310.1| conserved hypothetical protein [Ricinus comm...   184   7e-44

>emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]
          Length = 422

 Score =  259 bits (662), Expect = 2e-66
 Identities = 180/406 (44%), Positives = 223/406 (54%), Gaps = 29/406 (7%)
 Frame = -3

Query: 1530 TSLFDPLSNYFDVFXXXXXXXXXXXXXPLNLDMVWSRNLRSEPNSTDMXXXXXXXXXXXX 1351
            +S+FDPLSNYFD                LNLDMVWS+ LRS+PN T++            
Sbjct: 23   SSMFDPLSNYFDPLSRSPTQLQNPNSL-LNLDMVWSKTLRSDPNCTEIGGILASSSSTPP 81

Query: 1350 XXTHQDVNRVIIQTPPSSVSLPQGADTSVKASASSS-DPTNVXXXXXXXXXXXXXXXXTV 1174
                Q   R    +   S+  P   + + +A+AS+S D TNV                TV
Sbjct: 82   FSGAQGQIRATFPSSLPSMPFPPAPENAARATASASNDQTNVARNPKKRSRASRRAPTTV 141

Query: 1173 LTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXRLDLFSTASTMRSGHLEPNRPPPYLLRPF 994
            LTTDT+NFRAMVQEFTGI             RLDLF TASTMRSGHL+ + PP YLLRPF
Sbjct: 142  LTTDTTNFRAMVQEFTGIPAQPFTSSPFPRSRLDLFGTASTMRSGHLD-HAPPSYLLRPF 200

Query: 993  AQK--PSPFAS-----------SNMSPGIAXXXXXXXXXXXXXXXXXXN--YQLLSELGL 859
            AQK  P PFAS           S+M   IA                  +  YQL S+LGL
Sbjct: 201  AQKLQPPPFASPPPSSSSSFSSSSMVDAIASTTNITSGSASNTSSNSTSINYQLPSDLGL 260

Query: 858  SKQSQNLVNM--QNPLLTFQSLLQSTIPPKYPSPNSSGFGDNSQGIL------SNTRMGT 703
             KQ QNL+NM  QNP+L+ QS LQ+  P KYP PNS+  G   QG L      S+ +MG 
Sbjct: 261  VKQPQNLLNMNVQNPILSIQSFLQT--PLKYPHPNSAIMGSKPQGSLEIPSTDSHIKMGG 318

Query: 702  LDEFNMNHGQVRTHLNELPNFGTSD--GMRNDNNFASNCGDGVGSNEGDQGQARSFNENY 529
            L++F ++HG V THL+ LPN  +SD    R+DNN  S   DG+GS+ G+ GQ    N NY
Sbjct: 319  LEDFGLSHGHVNTHLSGLPNLVSSDRTASRSDNNPPS-WNDGLGSSGGNHGQLGPLNGNY 377

Query: 528  GNSQRANSCKLNFSGSSSH---EKGTENVTSRGGEGMVDSWICSSD 400
             NSQR  + K+N+S SSS    +K  ENV++R  EGMV+SWICSSD
Sbjct: 378  NNSQRVTNGKMNYSASSSDFHGDKVPENVSTR-SEGMVESWICSSD 422


>ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|222856542|gb|EEE94089.1|
            predicted protein [Populus trichocarpa]
          Length = 510

 Score =  201 bits (510), Expect = 9e-49
 Identities = 176/449 (39%), Positives = 210/449 (46%), Gaps = 72/449 (16%)
 Frame = -3

Query: 1530 TSLFDPLSNYFDVFXXXXXXXXXXXXXPLN------LDMVWSRNLRSEPNSTDMXXXXXX 1369
            T  FDP SNYFD                 N      LDMVWS+NLRS+PN TD+      
Sbjct: 70   TMFFDPFSNYFDPLAPSSSSSRSPLQSLTNPNSLNNLDMVWSKNLRSDPNCTDLGGFISS 129

Query: 1368 XXXXXXXXTHQDVNRVIIQTPPSSVSLPQGADTSVKASASSSDP------TNVXXXXXXX 1207
                     +Q  NR   Q+ PS     Q + T V  S S S        T         
Sbjct: 130  SLPTQQFT-NQTQNRTTFQSLPSH---GQESATRVPGSGSVSGTNDQVSNTAGIRNPKKR 185

Query: 1206 XXXXXXXXXTVLTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXRLDLFSTA-STMRSG--- 1039
                     TVL+TDT+NFRAMVQEFTGI             RLDLF TA ST+RS    
Sbjct: 186  SRASRRAPTTVLSTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTLRSAVSQ 245

Query: 1038 HLEPNRPPPYLLRPFAQK-----PSPFASS---------NMSPGIAXXXXXXXXXXXXXX 901
            HL+P+ PPPYLL PFA+K     P PF SS         +M   IA              
Sbjct: 246  HLDPS-PPPYLLGPFAKKFQPPPPPPFVSSGSAASSFSASMVDAIASTTATNINGTCTNT 304

Query: 900  XXXXN-------YQLLSELGLSKQSQNLVNM--QNPLLTFQSLLQSTIPPKYP---SPNS 757
                N       YQL S+LGL KQ  NL+N+  QNP+L F  LLQ+  PPKYP   SPN 
Sbjct: 305  TISNNIPLTSINYQLPSDLGLLKQPHNLLNLNVQNPILNFHPLLQA--PPKYPLPDSPNI 362

Query: 756  SGFGDNSQGIL------SNTRMGTLDEFNMNHGQVRTHLNELPNFGTSDGMRND------ 613
             G     QG L      S+ +M  L+EF +NHG V T+L+ L N  +S     D      
Sbjct: 363  LGTTKPQQGSLEIPLNVSHLKMVVLEEFGLNHGHVNTNLSGLQNIVSSSSPSADVTLVRR 422

Query: 612  ---NNFASNCGDGVGSNEGD---------QGQARSFNENYGNS-QRANSCKLNFSGSSS- 475
               +N  +N GDG GSNE D         QG  RS N +Y NS QR  + K+NF  SSS 
Sbjct: 423  SDHSNSLTNWGDGAGSNEVDHHHHQQQQQQGLLRSINGDYNNSTQRVTNGKVNFLASSSD 482

Query: 474  ----HEKGTENVTSRGGEGMVDSWICSSD 400
                H+ G ENV +R  EG ++SWICSSD
Sbjct: 483  FCGDHKLGQENVATR-SEGTMESWICSSD 510


>emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]
          Length = 449

 Score =  200 bits (509), Expect = 1e-48
 Identities = 160/412 (38%), Positives = 197/412 (47%), Gaps = 36/412 (8%)
 Frame = -3

Query: 1527 SLFDPLSNYFDVFXXXXXXXXXXXXXPLNLDMVWSRNLRSEPNSTDMXXXXXXXXXXXXX 1348
            +LFDP SNY D F              LNLD VWSR LRSEPN TD              
Sbjct: 57   TLFDPRSNYVDAFSQSSANPNANSL--LNLDTVWSRGLRSEPNCTDFGNLTGLSSSSTSS 114

Query: 1347 XTHQDVNRVIIQTPPSSVSLPQGADTSVKASASS--SDPTNVXXXXXXXXXXXXXXXXTV 1174
                 +    +Q P          +   +AS++S  SD TNV                TV
Sbjct: 115  SGQSMLG---VQGPVH--------ENGGRASSASLPSDQTNVVRSSKKRTRASRRAPTTV 163

Query: 1173 LTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXRLDLFSTASTMRSGHLEPNRPPPYLLRPF 994
            LTTDTSNFRAMVQEFTGI              LDLF   S+++ GHLEP   P Y LRP 
Sbjct: 164  LTTDTSNFRAMVQEFTGIPAPPFSASPYSRR-LDLFGAGSSIKPGHLEP-LGPLYPLRPS 221

Query: 993  AQKPSP--FASSNMSPGIAXXXXXXXXXXXXXXXXXXN---------------------- 886
              K  P  F SS+ SP  +                                         
Sbjct: 222  PHKVQPNLFVSSSSSPSPSFFNSTIGDSIVSTTNIATTSTNNIITTSMAAATNAINSGSN 281

Query: 885  -YQLLSELGLSKQSQNLVNMQNPLLTFQSLLQS--TIPPKYPSPNSSGFGDNSQGILSNT 715
             YQL S+ G  KQ QN++ MQNP+L+FQSLLQS  + P KYP  +   FG  S   L+  
Sbjct: 282  TYQLPSDPGFPKQPQNVLGMQNPILSFQSLLQSPPSHPLKYPLADVPVFGTKSPASLT-L 340

Query: 714  RMGTLDEFNMNHGQVRTHLNELPNFGTSDG---MRNDNNFASNCG-DGVGSNEGDQGQAR 547
             + + +E  + HG V  +++ LP+  TS G   +R D+N    C  DG GSNEG + Q R
Sbjct: 341  PLPSFEELGVPHGHVNANISGLPSHATSGGSRRLRTDDN--GTCWRDGAGSNEGSREQLR 398

Query: 546  SFNENYGNSQRANSCKLNFSGSSS---HEKGTENVTSRGGEGMVDSWICSSD 400
             FN NYG+S + +S KLN S SSS    EKG++NV+SR GEG VDSWIC SD
Sbjct: 399  PFNGNYGDSPQVSSFKLNCSASSSAFHPEKGSDNVSSR-GEGTVDSWICPSD 449


>ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|222853473|gb|EEE91020.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  197 bits (501), Expect = 1e-47
 Identities = 173/445 (38%), Positives = 210/445 (47%), Gaps = 72/445 (16%)
 Frame = -3

Query: 1530 TSLFDPLSNYFDVFXXXXXXXXXXXXXP----LNLDMVWSRNLRSEPNSTDMXXXXXXXX 1363
            T LFDPLSNYFD                    LNLDMVWS+NLRSEPN TD+        
Sbjct: 67   TMLFDPLSNYFDPLSSASSRSPPPPFTNPNSLLNLDMVWSKNLRSEPNCTDLGGFISSSS 126

Query: 1362 XXXXXXTHQDVNRVIIQTPPSSVSLPQGADTSVKASASSSDP----TNVXXXXXXXXXXX 1195
                  T+Q   R   Q+ P     P G +++ +   S ++     T             
Sbjct: 127  PTQQLFTNQTQTRTTFQSLP-----PHGHESATRGPVSGTNDQVSNTAGVRNPKKRSRAS 181

Query: 1194 XXXXXTVLTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXRLDLFST-ASTMRSG---HLEP 1027
                 TVLTTDT+NFRAMVQEFTGI             RLDLF T AST+RS    HL+P
Sbjct: 182  RRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTLRSAVSHHLDP 241

Query: 1026 NRPPPYLLRPFAQK-------PSPFASS---------NMSPGIA---------XXXXXXX 922
            + PPPYLLRPFAQ+         PFASS         +M   IA                
Sbjct: 242  S-PPPYLLRPFAQRFQPPPPPAPPFASSGSTASSFSTSMVDAIASTTTTNINNSGACTNS 300

Query: 921  XXXXXXXXXXXNYQLLSELGLSKQSQNL--VNMQNPLLTFQSLLQSTIPPKYPSPNSS-- 754
                       NYQL S+LGL KQ  +L  +N+QNP+L F  L Q+  P KYP PNS+  
Sbjct: 301  TTTSNISSTSINYQLPSDLGLLKQPHHLLNINVQNPILNFHPLFQA--PHKYPLPNSTNI 358

Query: 753  -GFGDNSQGIL-------SNTRMGTLDEFNMNHGQVRTHLNELPNFGTSDG--------M 622
             G     QG         S+ +MG L+EF M+HG V T+L  L N  +S          M
Sbjct: 359  LGTTKAQQGSSLEIPSNDSHLKMGVLEEFGMSHGHVSTNLTGLQNIVSSSSSPSADATLM 418

Query: 621  R--NDNNFASNCGDGVGSNEG-------DQGQARSFNENYGNS-QRANSCKLNFSGSSSH 472
            R  + NN  +N GDGVGSNEG        QG  RS N NY NS QR  + K+NF  SSS 
Sbjct: 419  RRGDHNNNLANWGDGVGSNEGGHHHHQQQQGLLRSINGNYNNSTQRVTNGKVNFLASSSS 478

Query: 471  E-----KGTENVTSRGGEGMVDSWI 412
            +     KG ENV +R  E + D+ I
Sbjct: 479  DFRGDNKGQENVATRSEEVVNDNEI 503


>ref|XP_002534310.1| conserved hypothetical protein [Ricinus communis]
            gi|223525518|gb|EEF28072.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 498

 Score =  184 bits (468), Expect = 7e-44
 Identities = 164/438 (37%), Positives = 201/438 (45%), Gaps = 62/438 (14%)
 Frame = -3

Query: 1527 SLFDPLSNYFD-VFXXXXXXXXXXXXXPLNLDMVWSRNLRSEPNSTDMXXXXXXXXXXXX 1351
            S+FDPLSNYFD +               LNLDMVWS+NLRS+ N TD+            
Sbjct: 65   SMFDPLSNYFDPLSSSRPPPPLTHPNSLLNLDMVWSKNLRSDTNCTDLGGFIATSSSPTQ 124

Query: 1350 XXTHQDVN-----RVIIQTPP-SSVSLPQGADTSVKASASS------SDPTNVXXXXXXX 1207
                            IQ PP    + P     S  AS S+      +  TN+       
Sbjct: 125  QFFTNQTQTGPTYNPSIQIPPVQETTAPSRGPGSASASGSNGHQTNNTTTTNIVRNPKKR 184

Query: 1206 XXXXXXXXXTVLTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXRLDLFSTA--STMRS--G 1039
                     TVLTTDT+NFRAMVQEFTGI             RLDLF TA  S++RS   
Sbjct: 185  SRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAAASSLRSVVS 244

Query: 1038 HLEPNRPPPYLLRPFAQKPSP-----FASSNMSPGIAXXXXXXXXXXXXXXXXXXNYQLL 874
            HLEP+ P  YLLRPFAQK  P      +SS+M   IA                       
Sbjct: 245  HLEPSHPS-YLLRPFAQKIQPPFLSSSSSSSMIDAIASSTTTSTNINSNATTNTTTNTTS 303

Query: 873  -SELGLSKQSQNLVNMQ---NPLLTFQSLLQSTIPPKYPSPNSSGFGDNSQ-GILS---- 721
             S+L L K  QNL+N+    +P+L F SL Q +  PKY  PNSS      Q G L     
Sbjct: 304  NSDLSLLKYPQNLLNINMHNSPMLNFHSLFQPS--PKYSLPNSSILATKPQEGSLDTPSN 361

Query: 720  --NTRMGTLDEFNMNHGQVRTHLNELPNF-------------GTSDGMRNDNNFASNCGD 586
              + +MG L+EF ++HG V T+L  L N               +S    N+NN + N GD
Sbjct: 362  DPHLKMGVLEEFGLSHGHVSTNLTGLHNLVSSSDTTLRRSDHNSSSSSNNNNNNSGNWGD 421

Query: 585  -GVGSNEGDQGQARSFNENYGNSQR--------ANSCKLNFSGSSSH----EKGTEN--- 454
              VGSNEGD    RS N NY N+          AN+ K+N+S SSS     +KG E    
Sbjct: 422  RRVGSNEGDH-LLRSINGNYNNNNSSSNTQRVVANNGKVNYSASSSDFNHGDKGPETNVV 480

Query: 453  VTSRGGEGMVDSWICSSD 400
            V +   EGMV+SWICSSD
Sbjct: 481  VANTRSEGMVESWICSSD 498


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