BLASTX nr result
ID: Coptis21_contig00002888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002888
(1444 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati... 603 e-170
ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ... 594 e-167
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ... 583 e-164
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ... 582 e-163
ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|2... 577 e-162
>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
subunit S3, putative [Ricinus communis]
Length = 427
Score = 603 bits (1555), Expect = e-170
Identities = 300/426 (70%), Positives = 355/426 (83%), Gaps = 1/426 (0%)
Frame = +3
Query: 57 SDSDMEPLIAQIHELSTSPDQFSRLNDLLKQSQDSLHSQA-SQLAPHLHQLHPSNHSLGY 233
+ +E L+ QI LS+S S L++ LKQ+ DSLHS + ++L P L QL PS HSLGY
Sbjct: 2 NSGSIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPFLDQLDPSVHSLGY 61
Query: 234 LYFLEAYTGAALSKEQSVELVPVVATFITTCSAEQIRFATDKFISVCKRFKDELMSLRTP 413
LYFLEA T +SKEQ+ LV ++A F+T+C+A+QIR A DKFISVCKRFKD++M L P
Sbjct: 62 LYFLEACTSGPISKEQARTLVLILARFVTSCAADQIRLAPDKFISVCKRFKDQVMLLEEP 121
Query: 414 IRGIAPLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFL 593
+RG+APL A+RKLQSS LTTLHP+FL LCLL+KCYK+GL ILE+DIFE+DQP+D FL
Sbjct: 122 MRGVAPLLAAVRKLQSSSVHLTTLHPEFLQLCLLSKCYKTGLSILEDDIFEVDQPRDLFL 181
Query: 594 YCYYGGMICVGDKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLP 773
Y YYGGM+C+G K +RKA+ELLHNVVTAPMSS NAIAVEA+KKYIL SLI+ GQ STSLP
Sbjct: 182 YSYYGGMVCIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILASLIHQGQFSTSLP 241
Query: 774 KYISPTGQRNLRNYCQTYYDLANNYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSL 953
KY S QRNL+N+CQ Y +LAN+YSTGK +E+E+ V +R+ F+SDNNLGLVKQVVSS+
Sbjct: 242 KYASSAAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNREKFESDNNLGLVKQVVSSM 301
Query: 954 SKRNIQRLTQTYLTLSLQDIANRVQLNSSKEAEMHVLQMIQDGEIYATINQKDGMVSFHE 1133
KRNIQRLTQTYLTLSLQDIAN VQLNS KEAEMHVLQMIQDGEIYATINQKDGMV F E
Sbjct: 302 YKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLE 361
Query: 1134 DPEQYKTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSG 1313
DPEQYKTCEMIEHIDSSIQRIM LSKKL+A+DEL+SCDP Y+ KA RER RF+FDD+D+
Sbjct: 362 DPEQYKTCEMIEHIDSSIQRIMNLSKKLTAMDELMSCDPLYLAKAGRERQRFDFDDFDTV 421
Query: 1314 PQRFNM 1331
PQ+FN+
Sbjct: 422 PQKFNI 427
>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
gi|296090247|emb|CBI40066.3| unnamed protein product
[Vitis vinifera]
Length = 424
Score = 594 bits (1531), Expect = e-167
Identities = 292/421 (69%), Positives = 347/421 (82%)
Frame = +3
Query: 69 MEPLIAQIHELSTSPDQFSRLNDLLKQSQDSLHSQASQLAPHLHQLHPSNHSLGYLYFLE 248
+E ++ QI LS S L+ LLKQ+ D LH+++++LAP L QL PS H+LGYLY LE
Sbjct: 4 VEAVVTQIQGLSGGSGDISLLHSLLKQADDLLHNESTRLAPFLEQLDPSIHTLGYLYLLE 63
Query: 249 AYTGAALSKEQSVELVPVVATFITTCSAEQIRFATDKFISVCKRFKDELMSLRTPIRGIA 428
A T + KEQ+ +LV +A FI CSAEQI A DKF+S+CKR KD+++ L P+RG+A
Sbjct: 64 ACTSTPIPKEQANQLVLSIANFINNCSAEQIHLAPDKFVSLCKRLKDQVILLEAPMRGVA 123
Query: 429 PLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFLYCYYG 608
P+ A+RKLQS+ E LT LHPDFLLLCLLAKCYK+GL ILE+DIFE+DQP+DFFLYCYYG
Sbjct: 124 PMLTAVRKLQSASELLTVLHPDFLLLCLLAKCYKTGLCILEDDIFEVDQPRDFFLYCYYG 183
Query: 609 GMICVGDKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLPKYISP 788
GMIC+G K +RKA+ELLHNVVTAPMS+ NAIAVEA+KKYILVSLI++GQ ST+ PKY S
Sbjct: 184 GMICIGQKRFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHNGQFSTTFPKYTSS 243
Query: 789 TGQRNLRNYCQTYYDLANNYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSLSKRNI 968
QRNL+N+ Q Y DLAN+YS+GK SE E + +R+ F++D NLGLVKQVVSS+ KRNI
Sbjct: 244 VAQRNLKNFSQPYLDLANSYSSGKISEPEKCIQTNREKFEADKNLGLVKQVVSSMYKRNI 303
Query: 969 QRLTQTYLTLSLQDIANRVQLNSSKEAEMHVLQMIQDGEIYATINQKDGMVSFHEDPEQY 1148
QRLTQTYLTLSLQDIAN VQLNS KEAEMHVLQMIQDGEI+ATINQKDGMV F EDPEQY
Sbjct: 304 QRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFQEDPEQY 363
Query: 1149 KTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSGPQRFN 1328
KTCEMIEHIDSSIQRIMTLSKKL+ +DELISCDP Y+ KA RER RF+FDDYD+ PQ+FN
Sbjct: 364 KTCEMIEHIDSSIQRIMTLSKKLTTMDELISCDPLYLAKAGRERQRFDFDDYDTVPQKFN 423
Query: 1329 M 1331
+
Sbjct: 424 I 424
>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1 [Glycine
max]
Length = 423
Score = 583 bits (1502), Expect = e-164
Identities = 291/421 (69%), Positives = 347/421 (82%)
Frame = +3
Query: 69 MEPLIAQIHELSTSPDQFSRLNDLLKQSQDSLHSQASQLAPHLHQLHPSNHSLGYLYFLE 248
+E L+AQI LS+SP +RL+ +LKQ+ DSL S++++LAP L QL PS HSLG+LY LE
Sbjct: 4 LEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLYILE 63
Query: 249 AYTGAALSKEQSVELVPVVATFITTCSAEQIRFATDKFISVCKRFKDELMSLRTPIRGIA 428
A ++K Q+ +VP+V FI CS EQIR A DKF+SVCKR KD++M L PIRG+A
Sbjct: 64 ASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCKRLKDQVMLLEAPIRGVA 123
Query: 429 PLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFLYCYYG 608
PL A+RKLQ+S E LT LH +FLLLCLLAKCYK+GL IL++D+FE+DQP+D FLYCYYG
Sbjct: 124 PLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFLYCYYG 183
Query: 609 GMICVGDKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLPKYISP 788
GMIC+G K ++KA++LLHNVVTAPMS+ NAIAVEA+KKYILVSLI GQ STSLPKY S
Sbjct: 184 GMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLPKYSSS 243
Query: 789 TGQRNLRNYCQTYYDLANNYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSLSKRNI 968
T QRNL+N+CQ Y +LAN+Y TGK +E+E+ V + + F+SDNNLGLVKQVVSS+ KRNI
Sbjct: 244 TAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDNNLGLVKQVVSSMYKRNI 303
Query: 969 QRLTQTYLTLSLQDIANRVQLNSSKEAEMHVLQMIQDGEIYATINQKDGMVSFHEDPEQY 1148
QRLTQTYLTLSLQDIAN VQLNS KEAEMHVLQMIQDGEIYATINQKDGMV F EDPEQY
Sbjct: 304 QRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPEQY 363
Query: 1149 KTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSGPQRFN 1328
KTCEMIEHIDSSIQRIM LS+KL+A DE ISCD Y+ KA RER R++FDD+D PQ+FN
Sbjct: 364 KTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRERQRYDFDDFDV-PQKFN 422
Query: 1329 M 1331
+
Sbjct: 423 V 423
>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2 [Glycine
max]
Length = 423
Score = 582 bits (1499), Expect = e-163
Identities = 290/421 (68%), Positives = 347/421 (82%)
Frame = +3
Query: 69 MEPLIAQIHELSTSPDQFSRLNDLLKQSQDSLHSQASQLAPHLHQLHPSNHSLGYLYFLE 248
+E L+AQI LS+SP +RL+ +LKQ+ DSL S++++LAP L QL PS HSLG+LY LE
Sbjct: 4 LEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLYILE 63
Query: 249 AYTGAALSKEQSVELVPVVATFITTCSAEQIRFATDKFISVCKRFKDELMSLRTPIRGIA 428
A ++K Q+ +VP+V FI CS EQIR A DKF+SVC+R KD++M L PIRG+A
Sbjct: 64 ASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCRRLKDQVMLLEAPIRGVA 123
Query: 429 PLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFLYCYYG 608
PL A+RKLQ+S E LT LH +FLLLCLLAKCYK+GL IL++D+FE+DQP+D FLYCYYG
Sbjct: 124 PLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFLYCYYG 183
Query: 609 GMICVGDKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLPKYISP 788
GMIC+G K ++KA++LLHNVVTAPMS+ NAIAVEA+KKYILVSLI GQ STSLPKY S
Sbjct: 184 GMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLPKYSSS 243
Query: 789 TGQRNLRNYCQTYYDLANNYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSLSKRNI 968
T QRNL+N+CQ Y +LAN+Y TGK +E+E+ V + + F+SDNNLGLVKQVVSS+ KRNI
Sbjct: 244 TAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDNNLGLVKQVVSSMYKRNI 303
Query: 969 QRLTQTYLTLSLQDIANRVQLNSSKEAEMHVLQMIQDGEIYATINQKDGMVSFHEDPEQY 1148
QRLTQTYLTLSLQDIAN VQLNS KEAEMHVLQMIQDGEIYATINQKDGMV F EDPEQY
Sbjct: 304 QRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPEQY 363
Query: 1149 KTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSGPQRFN 1328
KTCEMIEHIDSSIQRIM LS+KL+A DE ISCD Y+ KA RER R++FDD+D PQ+FN
Sbjct: 364 KTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRERQRYDFDDFDV-PQKFN 422
Query: 1329 M 1331
+
Sbjct: 423 V 423
>ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|222847349|gb|EEE84896.1|
predicted protein [Populus trichocarpa]
Length = 423
Score = 577 bits (1488), Expect = e-162
Identities = 287/421 (68%), Positives = 345/421 (81%)
Frame = +3
Query: 69 MEPLIAQIHELSTSPDQFSRLNDLLKQSQDSLHSQASQLAPHLHQLHPSNHSLGYLYFLE 248
+E L+AQI LS+S S L LKQ+ + LH+++++L P L QL P+ HSLGYLY LE
Sbjct: 4 VESLVAQIQGLSSSAGDLSLLLTHLKQADEFLHNESTRLLPFLEQLDPTLHSLGYLYILE 63
Query: 249 AYTGAALSKEQSVELVPVVATFITTCSAEQIRFATDKFISVCKRFKDELMSLRTPIRGIA 428
A T ++ +Q+ LV +++ F+T+C A+QIR A +KFI+VCK FKD+++ L PIRG+
Sbjct: 64 ACTSWPVTNDQARRLVLILSRFLTSCVADQIRLAPEKFIAVCKSFKDQVLMLEAPIRGVV 123
Query: 429 PLRVAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIDQPKDFFLYCYYG 608
PL A++KL+SS E LTTLHPDFL LCLLAKCYK+GL ILE+DIFE+DQP+DF+LYCYYG
Sbjct: 124 PLLEAVKKLRSS-EHLTTLHPDFLQLCLLAKCYKTGLSILEDDIFEVDQPRDFYLYCYYG 182
Query: 609 GMICVGDKNYRKAMELLHNVVTAPMSSSNAIAVEAHKKYILVSLIYSGQVSTSLPKYISP 788
GMIC+G K ++KA+ELLHNVVTAPMSS NAIAVEA KKY+LVSLIY+GQ STSLPKY S
Sbjct: 183 GMICIGQKRFQKALELLHNVVTAPMSSINAIAVEAFKKYVLVSLIYNGQFSTSLPKYTSS 242
Query: 789 TGQRNLRNYCQTYYDLANNYSTGKSSEVESIVAIHRDTFQSDNNLGLVKQVVSSLSKRNI 968
QRNL+ CQ Y +LAN YS GK SE+E + +R+ F SDNNLGLVKQVV+S+ KRNI
Sbjct: 243 AAQRNLKTICQPYIELANTYSIGKISELEPYIQTNREKFDSDNNLGLVKQVVTSMYKRNI 302
Query: 969 QRLTQTYLTLSLQDIANRVQLNSSKEAEMHVLQMIQDGEIYATINQKDGMVSFHEDPEQY 1148
QRLTQTYLTLSLQDIAN VQL+S KEAEMHVLQMIQDGEIYATINQ+DGMV F EDPEQY
Sbjct: 303 QRLTQTYLTLSLQDIANTVQLSSPKEAEMHVLQMIQDGEIYATINQRDGMVRFLEDPEQY 362
Query: 1149 KTCEMIEHIDSSIQRIMTLSKKLSAVDELISCDPTYVKKAARERHRFEFDDYDSGPQRFN 1328
KTCEMIEHIDSSIQRIMTLSKKL+A+DELISCDP Y+ K RER RF+FDD+D PQ+FN
Sbjct: 363 KTCEMIEHIDSSIQRIMTLSKKLTAMDELISCDPLYLAKVGRERQRFDFDDFDPVPQKFN 422
Query: 1329 M 1331
+
Sbjct: 423 I 423