BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002885
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518027.1| PREDICTED: succinate dehydrogenase [ubiquino...   249   3e-64
ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2...   245   7e-63
ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquino...   244   1e-62
ref|XP_002269407.1| PREDICTED: succinate dehydrogenase [ubiquino...   244   1e-62
ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c...   244   1e-62

>ref|XP_003518027.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like [Glycine max]
          Length = 634

 Score =  249 bits (637), Expect = 3e-64
 Identities = 119/147 (80%), Positives = 128/147 (87%)
 Frame = -2

Query: 704 KIRNSNGSLLTSKIRLDMQRVMQNNAAVFRTRETLEEGCQLIDKTWENFHDVKLKDRSLI 525
           K+RNSNGSL TSKIRL+MQR+MQNNAAVFRT+ETLEEGCQLIDK WE+FHDVKLKDRSLI
Sbjct: 488 KLRNSNGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLI 547

Query: 524 WXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWLKHTLGYWENGK 345
           W               NACITMHSAEARKESRGAHAREDFTKRDDE W+KHTLGYW+N K
Sbjct: 548 WNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTLGYWDNEK 607

Query: 344 IRLDYRPVHMNTLDDEIESFPPKARVY 264
           +RLDYRPVHMNTLDDE+ESFPPKARVY
Sbjct: 608 VRLDYRPVHMNTLDDEVESFPPKARVY 634


>ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  245 bits (625), Expect = 7e-63
 Identities = 117/147 (79%), Positives = 125/147 (85%)
 Frame = -2

Query: 704 KIRNSNGSLLTSKIRLDMQRVMQNNAAVFRTRETLEEGCQLIDKTWENFHDVKLKDRSLI 525
           K+RNSNGSL TS IRL+MQR MQNNAAVFRT+ETLEEGC LIDK WE+FHDVK+KDRSLI
Sbjct: 492 KLRNSNGSLSTSHIRLNMQRTMQNNAAVFRTQETLEEGCHLIDKAWESFHDVKVKDRSLI 551

Query: 524 WXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWLKHTLGYWENGK 345
           W               NAC+TMHSAEARKESRGAHAREDFTKRDDENW+KHTLGYWEN K
Sbjct: 552 WNSDLIETLELENLLINACVTMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEK 611

Query: 344 IRLDYRPVHMNTLDDEIESFPPKARVY 264
           +RLDYRPVHMNTLDDEIE FPPKARVY
Sbjct: 612 VRLDYRPVHMNTLDDEIEPFPPKARVY 638


>ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial isoform 2 [Vitis vinifera]
          Length = 622

 Score =  244 bits (623), Expect = 1e-62
 Identities = 117/147 (79%), Positives = 127/147 (86%)
 Frame = -2

Query: 704 KIRNSNGSLLTSKIRLDMQRVMQNNAAVFRTRETLEEGCQLIDKTWENFHDVKLKDRSLI 525
           K+RNSNGS+ TSKIRL+MQRVMQNNAAVFRT+ETLEEGC+LIDK WE+FHDV+LKDRSLI
Sbjct: 476 KLRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWESFHDVQLKDRSLI 535

Query: 524 WXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWLKHTLGYWENGK 345
           W               NACITMHSAEARKESRGAHAREDFTKRDDENW++HTLGYWEN K
Sbjct: 536 WNSDLSETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWIRHTLGYWENEK 595

Query: 344 IRLDYRPVHMNTLDDEIESFPPKARVY 264
           +RLDYRPVHMN LDDEIES PPKARVY
Sbjct: 596 VRLDYRPVHMNPLDDEIESIPPKARVY 622


>ref|XP_002269407.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial isoform 1 [Vitis vinifera]
           gi|297735168|emb|CBI17530.3| unnamed protein product
           [Vitis vinifera]
          Length = 670

 Score =  244 bits (623), Expect = 1e-62
 Identities = 117/147 (79%), Positives = 127/147 (86%)
 Frame = -2

Query: 704 KIRNSNGSLLTSKIRLDMQRVMQNNAAVFRTRETLEEGCQLIDKTWENFHDVKLKDRSLI 525
           K+RNSNGS+ TSKIRL+MQRVMQNNAAVFRT+ETLEEGC+LIDK WE+FHDV+LKDRSLI
Sbjct: 524 KLRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWESFHDVQLKDRSLI 583

Query: 524 WXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWLKHTLGYWENGK 345
           W               NACITMHSAEARKESRGAHAREDFTKRDDENW++HTLGYWEN K
Sbjct: 584 WNSDLSETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWIRHTLGYWENEK 643

Query: 344 IRLDYRPVHMNTLDDEIESFPPKARVY 264
           +RLDYRPVHMN LDDEIES PPKARVY
Sbjct: 644 VRLDYRPVHMNPLDDEIESIPPKARVY 670


>ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis]
           gi|223529979|gb|EEF31905.1| succinate dehydrogenase,
           putative [Ricinus communis]
          Length = 622

 Score =  244 bits (623), Expect = 1e-62
 Identities = 117/147 (79%), Positives = 127/147 (86%)
 Frame = -2

Query: 704 KIRNSNGSLLTSKIRLDMQRVMQNNAAVFRTRETLEEGCQLIDKTWENFHDVKLKDRSLI 525
           K+RNSNGSL TSKIRL+MQR MQNNAAVFRT+ETLEEGCQLIDK WE+FHDVKLKDRSLI
Sbjct: 476 KLRNSNGSLPTSKIRLNMQRTMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLI 535

Query: 524 WXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWLKHTLGYWENGK 345
           W               NACITMHSAEARKESRGAHAREDFTKRDD++W+KHTLGYWEN K
Sbjct: 536 WNSDLIETVELENLLINACITMHSAEARKESRGAHAREDFTKRDDKDWMKHTLGYWENEK 595

Query: 344 IRLDYRPVHMNTLDDEIESFPPKARVY 264
           +RLDYRPVHMNTLDDE+E+ PPKARVY
Sbjct: 596 VRLDYRPVHMNTLDDEMETIPPKARVY 622